Arthrobacter sp. YC-RL1: ATC04_09635
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Entry
ATC04_09635 CDS
T04187
Name
(GenBank) RNA helicase
KO
K03727
ATP-dependent RNA helicase HelY [EC:
5.6.2.6
]
Organism
ary
Arthrobacter sp. YC-RL1
Brite
KEGG Orthology (KO) [BR:
ary00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ary03019
]
ATC04_09635
Enzymes [BR:
ary01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ATC04_09635
Messenger RNA biogenesis [BR:
ary03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ATC04_09635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DSHCT
DEAD
ResIII
Helicase_C
MTR4-like_stalk
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
ALQ30796
UniProt:
A0A9X0FFA5
LinkDB
All DBs
Position
complement(2058840..2061626)
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AA seq
928 aa
AA seq
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MTSPAERYANSKARQVEFGTSLPDFRATLSFDLDPFQAEACRKVAEGHGVLVAAPTGAGK
TVVGEFAIFQAMAENRKAFYTTPIKALSNQKFTELVKVYGPEKVGLLTGDTSINSEAQIV
VMTTEVLRNMLYADSQTLDGLGYVIMDEVHYLADKFRGAVWEEVIIHLPSNVQIISLSAT
VSNAEEFGGWLDTVRGDTDIIVSEVRPVPLFQHVMVGPNLVDLFAEDVAFDKVAEGDIKA
SVNPELRKLVRSHSPGGRVQRGRGRGPARGPQRAPGLSQRVSRSSVIARLDRAGLLPAIF
FIFSRKGCDMAVQQCAMADLRLTTNEEAAEIAQALDEVAYRIPNEDLDVLEFWSWRDGLV
RGFASHHAGLLPIFKEIVEDLFARNLVKVVFATETLALGVNMPARSVVLEKLVKFNGESH
VQISSGEYTQLTGRAGRRGIDVEGHSIVLWNPDMEPEALAGLASRRTYPLNSSFRPTYNM
STNLLAQFGREQTRQILESSFAQYQADRSVVGMARQVRSKEESLAGYAKSMECHLGDFTE
YLKLQRELAALEKTAVKSRRHERRSAAERSLQAVIRGDVVDLPGGRRFGRAVIVALDEAM
YNPRHTVLTEEGQLRRLSSEDLNGPLQIVSRIRIPKGFTGKSPKERRDLASSLRNAIYDH
RPPRQDAQSFDFDGSDSFEREIEKLRLELRDHPCHACSEREDHMRWADRYWKLKKDTDKA
RRNIRGRTNTIATQFDKVCKVLEQFGYLVPSSGGEDFSITDAGRRLRRIYGERDLLTSQV
LETGKLTGLKAEELCAVVAFLVYQGRRDYDRPDPKMPTEKIADIFTQTINIWGPLSDAEE
ALGLEPTAPPESGLIWPMYKWARGSSLNSALRGTDLAPGDFVRWAKQVIDTLDQFAKNTD
LPPQLVRGAYQAADSIKRGVVAYSNVLD
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
gtgacttcccccgcggaacgctacgcgaattccaaggcgcgccaggtcgaattcggcacc
agcctgccggacttccgggcaaccctctccttcgacctggatccgttccaggccgaggcc
tgccgcaaggtcgccgagggacacggcgtcctggtggcagctccgaccggagccggcaaa
acggtggtgggggagttcgcgatcttccaggccatggccgagaaccgcaaggccttctac
accacgcccatcaaggcgctgagcaaccagaagttcaccgagctggtcaaggtctacggc
ccggagaaggtgggcctgctcaccggcgacacctccatcaactccgaggcgcagatcgtg
gtgatgaccaccgaggtgctgcgcaacatgctctacgcggactcgcagaccctggacggg
ctgggctacgtcatcatggacgaggtccactacctggcggacaagttccgcggcgcggtc
tgggaagaagtgatcatccaccttccctccaacgtgcagatcatctcgctgtccgccacc
gtctccaatgccgaggaattcggcggctggctggacaccgtgcgcggggacaccgacatc
atcgtctccgaggtgcgtccggtgccgctgttccagcacgtcatggtcggcccgaacctg
gtggacctgttcgccgaggacgtcgcgttcgacaaggtcgccgagggcgacatcaaggcc
agcgtcaaccccgaactgcgcaagctcgtgcgcagccacagccccggcgggcgtgtgcag
cgcggacgcggccggggaccggcccgcgggccgcagcgcgcgcccgggctcagccagcgc
gtctcgcgctcctcggtcatcgccaggcttgaccgcgccgggctgctgccggccatcttc
ttcatcttctcccgcaagggctgcgacatggcggtgcagcagtgcgccatggcggatctg
cgcctgaccaccaacgaggaagccgccgaaatcgcgcaggcgcttgacgaggtggcctac
cggatccccaacgaggacctggacgtgctcgaattctggagctggcgcgacgggctggtg
cgcggcttcgcctcccaccacgccggcctgctgccgatcttcaaggaaattgtcgaggac
ctgttcgcccgcaacctggtcaaggtagtgttcgccaccgaaaccctggccctgggcgtg
aacatgccggcccgctcggtggtgctggaaaagctggtcaagttcaacggcgaatcccac
gtgcagatttcctcgggggagtacacccagctcaccgggcgcgccggacggcgcggcatc
gacgtggaaggccactccatcgtgctgtggaaccccgacatggaacccgaggcgctggcc
ggactagcctcgcggcgcacctacccgctgaactcctcgttccgcccgacctacaacatg
tccacaaacctgttggcgcagttcggccgcgagcaaacccgccagatcctggaaagctcc
ttcgcccagtaccaggcggaccgctcggtggtgggcatggcccggcaggtgcgctccaag
gaagagtccctggccggctatgccaagtccatggaatgccacttgggcgacttcaccgaa
tacctgaagctgcagcgcgagctggcggcgctggagaagaccgccgtgaagtcgcggcgg
cacgagaggcgctcggccgccgagcgctccttgcaggccgtgatccgcggcgacgtggtg
gacctgcccggcgggcgccgcttcggccgcgcggtgatcgtcgcgctggatgaggccatg
tacaacccgagacacaccgtgctgaccgaggaaggccagctgcgccggctctcctccgaa
gacctgaacgggccgctgcagatcgtctcgcgcatccgcatccccaagggatttaccggc
aagagccccaaggagcgccgcgacctggcctcctcgctgcgcaacgcgatctacgatcac
cgcccgccgcgccaggacgcgcagagcttcgacttcgacggctcggattccttcgagcgc
gagatcgagaagctgcgcctggaactgcgcgaccacccgtgccacgcctgctccgagcgc
gaggaccacatgcgctgggccgaccgctactggaagctgaagaaggacaccgacaaggcc
cggcgcaacatccgcggccgcaccaatacgattgccacccagttcgacaaggtctgcaag
gtcctggaacagttcggctacctggtcccgagctccggcggggaggacttcagcatcacc
gacgccggccggcgcctgcgccgcatctacggcgaacgcgacctgctcaccagccaggtg
ctggaaaccggcaagctgaccgggctgaaagccgaggagctgtgcgccgtggtcgccttc
ctggtctaccagggccggcgcgactacgacaggccggacccgaagatgcccaccgagaag
atcgccgacatcttcacccagaccatcaacatctggggcccgctctcggacgccgaggag
gcgctgggtctggagcccaccgccccgccggagtccgggctgatctggccgatgtacaag
tgggctcgcggctccagcctgaacagcgcgctgcgcggcaccgacctggccccgggcgac
ttcgtgcgctgggccaagcaggtcatcgacacccttgaccagttcgccaagaacaccgac
ctgcctcctcagctggtgcgcggcgcctaccaggcagcggacagcatcaagcgcggcgtc
gtcgcctattcgaacgtgctggactag
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