Aeromonas salmonicida subsp. salmonicida A449: ASA_2499
Help
Entry
ASA_2499 CDS
T00500
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
asa
Aeromonas salmonicida subsp. salmonicida A449
Pathway
asa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ASA_2499 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asa03019
]
ASA_2499 (deaD)
03009 Ribosome biogenesis [BR:
asa03009
]
ASA_2499 (deaD)
Enzymes [BR:
asa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ASA_2499 (deaD)
Messenger RNA biogenesis [BR:
asa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ASA_2499 (deaD)
Ribosome biogenesis [BR:
asa03009
]
Prokaryotic type
rRNA helicases
ASA_2499 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_19
CMS1
Helicase_RecD
DeaD_C
Motif
Other DBs
NCBI-ProteinID:
ABO90531
UniProt:
A4SNQ9
LinkDB
All DBs
Position
complement(2663465..2665306)
Genome browser
AA seq
613 aa
AA seq
DB search
MSDTEQLPLFSELGLAAPVLKALQDVGYERPSPIQAAAIPHLMAGHDLLGQAQTGTGKTA
AFALPLLSRLEAGNRNTQVLVLAPTRELALQVAEACQRYAKHMPDFHVLPIYGGSSYETQ
TRALRRGAQVVVGTPGRVMDLIRRKNLDLSGLKALVLDEADEMLRMGFIDDVDWIMEQCP
STRQVALFSATMPDQIRRVAQKHLKQPKEIKIVSKTSTAPTIRQRYWQVTGLHKLDAMTR
LLEVEPYEAVLVFVRTKNAAEELAGKLAARGHACEALHGDIPQKLRERTVDKLRQGQLDI
LIATDVVARGLDVERITHVVNYDIPYDTESYVHRIGRTGRAGRKGEAILFVAPRERRMLR
AIEHATRQAIEPMKMPSTEDINQHRMTKFKERIRETMMGEELELYLNLVNELIEEDSADP
LELAAALAKLVQGDQPLLLDDSIPEPQFSSNDRGGRDFERRDGGSDFADRGDRPARRMPS
LEPRPLKDNPDVEMERYRVDVGAHHGVKPGQIVGAIANEANIESRFIGNIDIADDFSTVD
LPKGMTADVLEVIKKARVCQRPLMITRYTEVPAGSNTAPRPPRSDRPFNKSGERREGGFN
KDRKFGGNKRRDS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtctgataccgaacaactgcccctttttagtgagcttggactggccgcgcctgtattg
aaagcgctgcaagacgtgggctatgagcgcccgtcaccgatccaggccgcagcaattccc
cacctcatggcgggacacgatctgctggggcaggcgcaaaccggtacagggaagaccgct
gcttttgccttgcctctgttgtctcgtctggaagctggtaaccgcaacacccaggttttg
gtgctggctccgactcgtgaactggccctgcaagttgccgaggcgtgccaacgttacgcc
aagcacatgcctgacttccacgtcctgcccatctacggtggctcttcttacgaaacccag
acccgcgccctgcgtcgcggtgcccaggttgtcgtgggtactccgggccgtgtgatggac
ctgatccgtcgcaagaacttggatctttccggtctgaaagccctggtgctggacgaagct
gatgaaatgctgcgcatgggcttcatcgatgacgtggactggatcatggaacagtgcccg
agcacccgtcaggttgctctcttctctgccaccatgccggaccagatccgccgtgttgcc
cagaagcacctgaagcagcccaaagagatcaaaatcgtctccaagacctccactgcaccg
accatccgtcagcgctactggcaggtaaccggtctgcacaagctggacgccatgacccgt
ctgctggaagtcgagccgtacgaagccgtactggtcttcgtgcgtaccaagaacgctgcc
gaagagctggctggcaaactggccgctcgtggccatgcttgtgaagcgctgcacggtgac
atcccgcagaagctgcgtgagcgtaccgttgacaagctgcgtcaaggccaactggacatc
ctgatcgccaccgacgtagtcgcccgtggtctggacgtcgagcgtatcacccacgtggtg
aactacgacattccttacgataccgaatcctacgtgcaccgtatcggccgtaccggtcgt
gccggtcgcaagggtgaggccatcctgtttgttgctccccgcgagcgtcgtatgctgcgc
gccatcgagcacgccactcgtcaggccatcgagccgatgaagatgccgagtaccgaggac
atcaaccagcaccgtatgaccaagttcaaagagcgcatccgggaaaccatgatgggcgaa
gagcttgagctctatctgaacctggtgaacgagctgatcgaagaagattctgccgatccg
ctggaactggctgccgccctggccaagctggtacaaggtgatcaaccgctgctgctggat
gactccatccctgagccgcagttcagcagcaatgatcgtggtggtcgtgatttcgaacgc
cgtgacggtggcagtgattttgctgaccgtggtgatcgtcctgcccgtcgcatgccgtcc
ctcgagccgcgtccgttgaaagacaacccggatgtcgagatggagcgctatcgcgtagac
gtgggtgcccatcacggtgtcaagccgggccagatcgtgggcgctattgccaacgaagcg
aacatcgagagccgtttcatcggcaacatcgatatcgccgatgacttctccaccgtcgac
ctgcccaagggcatgaccgccgatgtgctggaagtgatcaagaaagcccgtgtttgccag
cgtccgctgatgatcacccgctacacagaggtgccggctggcagcaacactgccccccgt
ccgccccgcagcgatcgtcctttcaacaagagcggggagcgccgtgaaggtggcttcaac
aaggatcgcaagttcggtggcaacaagcgccgtgacagctaa
DBGET
integrated database retrieval system
