Anolis sagrei ordinatus (Brown anole): 132762847
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Entry
132762847 CDS
T09595
Symbol
UPF3B
Name
(RefSeq) regulator of nonsense transcripts 3B isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03013
Nucleocytoplasmic transport
asao03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132762847 (UPF3B)
03015 mRNA surveillance pathway
132762847 (UPF3B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asao03019
]
132762847 (UPF3B)
Messenger RNA biogenesis [BR:
asao03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
132762847 (UPF3B)
mRNA cycle factors
P-body specific factors
132762847 (UPF3B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_1
Motif
Other DBs
NCBI-GeneID:
132762847
NCBI-ProteinID:
XP_060612014
LinkDB
All DBs
Position
Unknown
AA seq
518 aa
AA seq
DB search
MGMRVEALARGAAANGRARRSGRRASGALLLAVAAGALRMKEGKENARPKEKRGAASASS
AGAGALAVGGGADAKAGGEPDSRPRDKKELLSKVVIRRLPPSLTKEQLEEHLQPLPEHDY
FEFFANDTSLYPHMFSRAYINFKNQEDIVLFRDRFDGYVFVDHKGLEYPAIVEFAPFQKA
AKKKSKKKDAKAGTIDDDPEYKKFLESYSADDEKLTSTPETLLEEIEAKNKELIAKKTTP
LLNFLKNKQRIREEKREERRRREIERKRQREEERRKWKEEERRKRKEAEKTKKVERCPEK
ERDRSKDEPKIKLLKKPEKDERDFEKKEKAKRLERESLREDKVASPSVGSVQAKRSDGEA
KEEKAKKLVFSSQLEDDYGKDYREREYDREYERIQRDKFRRQDDERRRQKDRFEKERVFR
RKDDDMKKERDSLREKGKRAELSDYMGNAEKASKEDKKEEMAKRDRIRNKDRPAMQLYQP
GARSRSRLSAYDESPAKSPDQGAEKKPESEAGNAKEAE
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggggatgagggtagaggctctcgcgagaggagcggcggccaatgggcgagcgagacgg
agcggaagacgggcgagcggggccttgttgttggctgtggcggccggggcgttgaggatg
aaggaaggcaaagagaacgccaggcccaaagagaagcgcggcgcagcctccgcctcctcc
gccggagcgggagccctggcggtgggcgggggcgcggacgccaaggccggaggggagccc
gacagcaggccccgggacaagaaggagctcctcagcaaggtggtgattcgccgcctccct
cccagcctaaccaaggagcagcttgaagaacatctccagcctttgccggaacacgactac
tttgagttctttgctaatgacaccagtttgtaccctcacatgttttccagagcatacatc
aactttaaaaaccaagaagacatagttctgttcagggatcgctttgatggttatgttttt
gttgatcacaaaggtctggaatatcctgccatagtggaatttgcaccatttcaaaaggct
gccaaaaaaaagagtaagaaaaaggacgccaaagccgggaccattgacgatgatccagag
tacaaaaagttcttagaaagctacagtgcagacgatgagaagttgacatccacccctgag
acgttactagaagaaatagaggccaaaaacaaagaattaatagccaaaaagacaactcct
ctactgaacttcttgaagaataagcagaggattagagaagaaaaacgagaggagaggagg
aggagagaaatagagaggaaacgacaaagggaagaagaaaggaggaaatggaaagaagag
gaaaggaggaaaaggaaggaggctgaaaaaaccaaaaaagtggaaaggtgcccagagaaa
gaaagggaccgatccaaggacgagccgaaaattaagctacttaagaagccggagaaagac
gagagagactttgaaaaaaaggaaaaggccaagaggctggagagagaaagcctgcgggag
gacaaggtggccagcccaagcgttggcagcgtccaggccaagcgctctgatggcgaagcc
aaagaggaaaaggccaagaaattagtgttttcttcccaattggaggacgactatgggaaa
gactaccgggagagagaatacgaccgagagtacgagcgaatccagcgagataaatttcgg
cgccaagatgacgagcggcggaggcagaaagaccgctttgagaaagagagagttttcagg
agaaaagatgatgatatgaaaaaggagagagactccttgcgggagaaagggaaaagagcc
gaattgtcagactacatgggcaatgcagagaaggccagcaaagaggataagaaagaagaa
atggccaagagggaccgcattagaaacaaggaccgcccagctatgcaactctaccagcct
ggggcgcggagccgtagccggctgtcggcatacgatgaaagccccgcgaagtcccctgac
caaggagccgagaagaagcccgagagcgaggccggcaacgcaaaggaggccgagtga
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