Anolis sagrei ordinatus (Brown anole): 132765125
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Entry
132765125 CDS
T09595
Name
(RefSeq) general transcription factor IIH subunit 4
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03022
Basal transcription factors
asao03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
132765125
09124 Replication and repair
03420 Nucleotide excision repair
132765125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asao03021
]
132765125
03400 DNA repair and recombination proteins [BR:
asao03400
]
132765125
Transcription machinery [BR:
asao03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
132765125
DNA repair and recombination proteins [BR:
asao03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
132765125
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
132765125
NCBI-ProteinID:
XP_060615296
LinkDB
All DBs
Position
Unknown
AA seq
460 aa
AA seq
DB search
MESVMKLQKVHLKCKNLHEFLRGLSPGVLDRLYNHPATCLAVFRELPGLAKNYVMRMLLL
EQPLPQAAVASWVKKEYTKEQEESSDILLGLRLWHKQLLPGGLQGIVLNPIFKENLRIAL
MGGGKPWSDDTSQLGPDKHARDVPSLDKYAEERWEVILDFMVGSPSAAVSQDLAQLLTEA
GLMKSSEPGEPPCITSSGFQFLLLDTSSQLWYFMLQYLQSAETRGMDLVEILSFLFQLSF
SSLGKDYSVEGMSESLLNFLQHLREFGLVFQRKRKSRRYYPTRLAINLSSGISGTTTNTR
NQGFIVVETNYRIYAYTDSELQIALIALFSEMLYRFPNLVVAQVTRESVQQAIANGITAD
QIIHFLRTRAHPVMLKQTPVLPPTITDQIRLWELERDRLRFSEGVLYNQFLSQVDFELLR
DHARELGVLIFENPSKRLMVVTPAGHSDVKRFWKRQKHSS
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggtgatgaagctccagaaggtgcacttgaaatgcaagaacctgcacgaattc
ctgcgaggcctcagtcctggggtcttggatcgtctctacaatcaccccgctacttgcctg
gctgtcttccgagagctgccaggtttggccaagaactatgttatgcggatgctgctttta
gaacagcctcttcctcaggccgctgtggcatcatgggtaaagaaggaatacactaaggaa
caggaagagagctcagatatcttgctgggtctgcggctgtggcacaagcagttgcttcca
gggggtctccaaggaatcgtcttgaaccctatattcaaggaaaacttgcgcattgccctg
atgggaggtggtaagccgtggtctgatgacactagccaattaggaccagacaagcatgcc
cgggatgttccatctctagacaaatatgctgaagaaaggtgggaggtcatcttagacttt
atggtgggctctcctagtgcagcagtgagtcaagatttagcccagctgctcactgaagct
gggctgatgaagagtagtgagcctggcgagccaccttgcattacctcttctggtttccag
ttcctcttgctggatacctcatcacaactctggtacttcatgctgcagtacctccagtca
gctgagacccggggcatggacctggtggagattctttctttcctcttccagctcagcttc
tccagtcttggcaaggattattctgtggaaggaatgagtgaatctttgctaaactttctc
caacacctccgggagtttggtcttgtctttcaaagaaagaggaaatccagacgttactac
ccaactcgcctagcaatcaacctttcctctggcatttcgggcactaccacaaatactcgt
aaccagggctttatcgttgtggagacaaactacaggatctatgcatatacagattctgag
ctgcagattgcactcattgccctcttctctgagatgctgtatcgctttccaaatttagtg
gtggctcaagtcacccgggagagtgtgcaacaggccattgccaatggcattacagcagat
cagatcattcacttcctgcgtactagagctcaccctgtgatgctgaaacagacccctgtg
ctgccccccacaatcacagaccaaatccggctatgggagctggaacgggacagattgcgc
ttctctgagggtgttctgtacaaccagttcctctcccaggtggactttgagctgctgagg
gaccatgccagggaacttggggtgctcatttttgagaacccttccaagcgtctgatggtg
gtgactcctgccggacattcagatgtcaaacgcttctggaagcgacagaaacacagttcc
tga
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