Anolis sagrei ordinatus (Brown anole): 132781005
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Entry
132781005 CDS
T09595
Symbol
LIG4
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
asao
Anolis sagrei ordinatus (Brown anole)
Pathway
asao03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
132781005 (LIG4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asao03400
]
132781005 (LIG4)
Enzymes [BR:
asao01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
132781005 (LIG4)
DNA repair and recombination proteins [BR:
asao03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
132781005 (LIG4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
BRCT
DNA_ligase_IV
BRCT_2
DNA_ligase_A_C
RNA_ligase
mRNA_cap_enzyme
Motif
Other DBs
NCBI-GeneID:
132781005
NCBI-ProteinID:
XP_060640895
LinkDB
All DBs
Position
Unknown
AA seq
911 aa
AA seq
DB search
MSSIPASHSPSKLTVASQVPFGDLCSTLERMQKEKSRPEKTKYFKEFLDSWRKFHDALHK
NEKDVTDSFYPAMRLILPQLERERMAYGIKETMLAKLYIELLNLPKDGKDALKLLNYRTP
TGSRGDAGDFAMIAYFVLKPRCPKQGQLTIQQVNDILDSVSTNNAARRKDLVKKYLLQLI
THSTALEQKWLIRMIIKDLKLGISQQTIFSIFHPDATELHSVTTDLEKVCRLLHDPTVFL
SDVSITLFSAFKPMLAAIANIQQIEKQMNNQSFYIETKLDGERMQMHKDGDVYKYFSRNG
FDYTQQFGASPLEGSLTPFIHNVFENNVQNCILDGEMMAYSPTTQTFMQKGNKFDIKRMV
DDSELQTCFCVFDVLMINDQKLGHETLSKRYEVLNKIFTPIPGRIQVVSKTQANTRKEVV
DALNEAIDNREEGIVVKDPMSVYKPDKRGEGWLKIKPEYVNGLMDELDLLVVGGYWGKGL
RGGMMSHFLCAVAETPPPGEKPSVFHSICRVGSGYTMKELYDLGLKLAKHWKPYRKKDPP
CSILCGTEKPEVYIEPCNSVIVQIKAAEIVNSDMYKTECTLRFPRIEKIREDKEWHECMT
LDLLEQLRGKASGKLATKHLDISDNEPQEKKRKTVPKVKKKLGLMDHFKAPDLSSVSKVS
SMFHEVEFCVMSGTESYTKYELESKIAEFGGSIVQNPGPDTYCVVAGTENVRVKNIISSD
KHDVVRAEWVVQCFQTKQFVPWQPAFMIHMSPETKQHFAREYDSYGDSYTADVSVAQLKE
IFSRMNDLEEKISWEVIADIEARYLWDSSGLCLFRQCTVYLDPSDEASNSGATISQTRLL
TKALTLRFHGARVVPQLEEGVSHVISTDGADLTRLKTIRRTFERKFKIVSEQWVKDSIKA
GKLQNDNSYLI
NT seq
2736 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctatccctgcttcacattctccttccaagctaactgtggcatcacaagttcct
tttggagatctttgttcaaccttagaacgaatgcaaaaagagaaatctcgaccagagaaa
acaaaatatttcaaagaatttttagactcctggaggaaatttcatgatgctcttcataaa
aatgagaaggatgtcacagattctttttatcctgcaatgagactgattcttccccagttg
gaaagagagaggatggcttatggaattaaagaaacgatgcttgctaagctctatattgaa
ctgctgaacttacccaaagatgggaaagatgctttaaaacttcttaattaccgaacacct
actggttcacggggggatgctggagactttgctatgattgcctattttgtgctgaagcca
agatgtcccaagcaaggtcagctgaccatacaacaggtaaatgatattttagattctgtg
tctaccaataatgctgctagaagaaaagatctggtgaaaaaatatcttctgcagttaata
actcatagcacagcacttgaacagaaatggttgatcagaatgatcataaaggatttgaaa
cttgggattagccagcaaactatattttctatattccatcctgatgctactgaattgcac
agtgttaccactgatttggagaaggtttgtagactgttgcacgaccctactgtcttcctt
agtgatgtttctattacattattttctgcctttaagccaatgcttgctgctattgctaac
atacagcagattgaaaaacaaatgaacaaccagagtttctacatcgaaaccaaattagat
ggtgaacggatgcagatgcacaaagatggagatgtttacaaatacttttcccgaaacggg
tttgattacactcagcaatttggtgcgtctccccttgaaggctcattgaccccgttcatc
cataatgtttttgaaaacaatgttcagaactgcattttagatggtgaaatgatggcctac
agtcccacgacgcagaccttcatgcaaaagggaaacaaatttgatatcaaaaggatggtt
gatgattctgaattgcagacatgcttctgcgtctttgatgttctcatgattaatgatcaa
aagttgggccatgagacgctgagcaagagatatgaagtactaaataaaatctttacacca
ataccaggtcgaatacaggtggtatcaaaaacccaagcaaacactcgtaaagaagtagta
gatgctctaaatgaggcaatagataacagggaagaaggcattgtagtgaaggacccaatg
tcagtttacaagccagataaacgtggagaaggatggctgaagatcaaaccagagtatgtt
aacggattgatggatgaacttgacctcttagttgttggaggctactggggaaaaggtctt
cgtggtggcatgatgtcccattttttatgcgctgttgccgaaactccaccacctggtgaa
aaaccatctgtatttcattccatttgccgtgttggttcaggttacaccatgaaagagctg
tatgatcttggcttgaaattagctaaacactggaagccatatcgtaaaaaggatcctccc
tgtagtatcctgtgtggaactgagaaacctgaagtctatattgagccttgtaattcagtc
attgttcagattaaagcagcggagattgtcaatagtgatatgtacaaaacagagtgcact
ttacggttccctcgcattgagaaaataagagaagataaagaatggcatgaatgtatgaca
cttgaccttctcgaacaactcagaggcaaagcttctgggaagctagcaactaagcacctt
gatattagcgataatgagccacaagaaaagaaacgcaagactgtgccaaaggttaaaaag
aaacttggcctaatggaccacttcaaagcccctgatctttccagcgtaagtaaagtttcc
agtatgtttcatgaggttgagttctgcgttatgagtgggacagaaagctatacaaaatat
gaactagaaagcaaaatagcagaatttggtggcagcatagtacaaaatccagggccggac
acttactgtgttgtcgcaggaacggagaatgttagagtgaaaaatattatttcttctgat
aagcatgatgtcgtgagagcggaatgggttgtacagtgttttcagaccaaacaatttgtg
ccttggcagcctgctttcatgattcacatgtctccagaaaccaaacaacactttgcccgt
gagtatgattcctatggtgatagttacaccgctgatgtcagtgtggcccagttaaaggag
atcttctcaagaatgaatgacttggaggaaaagatctcatgggaggtgattgctgacata
gaagcacgttatttatgggacagctctgggttgtgtttgttcaggcagtgcaccgtttac
ctggatccttctgatgaagcgagcaattcaggtgccacgatcagtcaaaccagactgtta
actaaggcactgacccttcgctttcatggagcaagagttgtcccacagcttgaggaggga
gtgtcccatgtcatcagtacagatggtgctgatttgacgagactaaagacaatcagaaga
acatttgaaagaaaatttaaaatagtctctgagcaatgggtaaaagattctataaaggct
gggaagctgcaaaatgataatagttacttaatttga
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