KEGG   Alistipes senegalensis: NQ519_01890
Entry
NQ519_01890       CDS       T08441                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
asen  Alistipes senegalensis
Pathway
asen03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:asen00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    NQ519_01890 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asen03400]
    NQ519_01890 (uvrB)
DNA repair and recombination proteins [BR:asen03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     NQ519_01890 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      NQ519_01890 (uvrB)
SSDB
Motif
Pfam: UvrB_inter Helicase_C UvrB ResIII UVR DUF87 DEAD AAA_16 AAA_22 UB2H AAA_33 AAA_5
Other DBs
NCBI-ProteinID: UWN65611
LinkDB
Position
480526..482574
AA seq 682 aa
MDFKLVSDYAPMGDQPEAIGQLVSSIEHGSKHNTLLGVTGSGKTFTVANVIARLNRPTLV
LSHNKTLAAQLYGEFKNFFPENAVEYFVSYYDYYQPEAYLPSSDTYIEKDLQINAEIEKM
RLATVATLLSGRRDVIVVSSVSCLYGAGNPADFHATAINIKVGQVVSYKHFLYKLVEALY
TRTERELEPATFRVNGDTVDIMAAFGEFGNQCFRVMFFDNEVEAIQSIDPVTGQRIQSLD
SLTLYPTNLFVTTKERINTAVQQIYLDLGQQIEFFERAGRPMEAQRIKQRVEYDLEMIKE
LGYCPGIENYSRYFDGRAAGTRPFCLIDYFPKDYLMVVDESHVTLPQVHAMFGGDRARKE
NLVEYGFRLPAAKDNRPVTFAEFEQLQGTSIYVSATPADYELMKSEGVIVEQLIRPTGLV
DPPLEVRVTVNQIDDLIGEIDKRVKNDDKVLVTTITKRMAEELSKYFDRVGVRNRYIHSD
VDTLERIQILEDLRAGMFDVLVGVNLLREGLDLPEVALVAILDADKEGFLRNVRSLTQIA
GRAARHSQGNVILYADTCTDSMRYAIEQSNRRREKQVRYNMEHEMLPRRAQRSGTGQSTL
LTGRDTPDVNLTAYPIAEDHYAAVADVQKNYVASENIDALIDKAREEMERAAKSLDFLAA
AKFRDRMYELQKLREENRNKRN
NT seq 2049 nt   +upstreamnt  +downstreamnt
atggatttcaaactcgtatcggactacgccccgatgggcgaccaaccggaggcgatcgga
cagctggtgagctcgatcgaacacggctcgaagcacaacacgctgctgggcgtgacgggc
tccgggaagaccttcacggtggccaacgtcatcgcgcggctgaaccgtccgacgctggtg
ctgagccataacaagaccctcgcggcgcagctgtacggggagttcaagaacttctttccg
gaaaatgccgtggagtatttcgtctcctactacgactactaccagccggaagcctacctg
ccgtcgtcggacacctatatcgaaaaggacctccaaatcaacgccgagatcgagaaaatg
cgcctcgccacggtcgccacgctgctgtcgggacgccgcgacgtgatcgtcgtgtcgagc
gtctcgtgcctctacggcgcgggcaaccccgcggacttccacgccacggccatcaacatc
aaggtcgggcaggtcgtgagctacaagcacttcctctacaaactggtcgaggcgctctac
acccgcaccgaacgggagctggagccggcgacgttccgcgtcaacggcgacacggtggac
atcatggcggccttcggggagttcggcaaccagtgtttccgggtgatgttcttcgacaac
gaggtcgaagccatccagtccatcgaccctgtgacggggcagcgcatccagtcgctcgac
agcctgacgctctaccccacgaacctcttcgtgacgaccaaggagcgcatcaacaccgcc
gtgcaacaaatatacctcgacctgggccaacagatcgagttcttcgaacgcgccggacgc
ccgatggaggcgcagcgcatcaaacagcgcgtggagtacgacctcgaaatgatcaaggag
ctgggctactgccccggcatcgagaactattcgcgctatttcgacggccgcgccgccggg
acgcgccccttctgcctcatagactatttcccgaaagactatctgatggtcgtggacgaa
agccacgtcaccctgccgcaggtccacgccatgttcggcggcgaccgggcccgcaaggag
aacctcgtggagtacggcttccgcctcccggccgccaaggacaaccgcccggtgaccttc
gcggagttcgaacagctgcaaggcacctcgatctacgtgagcgccacgccggccgactac
gagctgatgaagagcgaaggggtgatcgtcgaacagctgatccgccccacggggctggtg
gacccgccgttggaggtgcgcgtgacggtgaaccagatcgacgacctgatcggagagatc
gacaagcgcgtgaagaacgacgacaaggtgctcgtgacgaccatcaccaaacgtatggcc
gaggagctctcgaaatatttcgaccgcgtgggcgtgcgcaaccgctacatccactcggac
gtagacacgctggaacgcatccagatcctcgaagacctgcgggccgggatgttcgacgtg
ctggtgggcgtgaacctgctgcgcgagggtctcgacctgccggaggtggcgctcgtggcc
atcctcgacgccgacaaggagggattcttgcgcaacgtgcgctccctcacgcagatcgcc
ggacgcgccgcccgccattcgcagggcaacgtcatcctctacgccgacacctgcaccgac
tcgatgcgctacgccatcgagcagagcaaccgccgccgggagaagcaggtgcgctacaac
atggagcacgaaatgctgccgcggcgtgcgcagcgcagcggcacgggacagagcaccctg
ctgacgggacgcgacaccccggatgtcaacctgacggcctaccccatcgccgaggaccac
tacgctgcggtggctgacgtgcagaagaactacgtggccagcgagaacatcgacgccctg
atcgacaaggcccgcgaagagatggaacgggcggccaaatcgctggatttcctcgccgcg
gcgaaattccgcgaccggatgtacgaattgcagaaactccgcgaggagaacagaaacaaa
cggaactga

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