Alistipes senegalensis: NQ519_01890
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Entry
NQ519_01890 CDS
T08441
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
asen
Alistipes senegalensis
Pathway
asen03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
NQ519_01890 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asen03400
]
NQ519_01890 (uvrB)
DNA repair and recombination proteins [BR:
asen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NQ519_01890 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NQ519_01890 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
Helicase_C
UvrB
ResIII
UVR
DUF87
DEAD
AAA_16
AAA_22
UB2H
AAA_33
AAA_5
Motif
Other DBs
NCBI-ProteinID:
UWN65611
LinkDB
All DBs
Position
480526..482574
Genome browser
AA seq
682 aa
AA seq
DB search
MDFKLVSDYAPMGDQPEAIGQLVSSIEHGSKHNTLLGVTGSGKTFTVANVIARLNRPTLV
LSHNKTLAAQLYGEFKNFFPENAVEYFVSYYDYYQPEAYLPSSDTYIEKDLQINAEIEKM
RLATVATLLSGRRDVIVVSSVSCLYGAGNPADFHATAINIKVGQVVSYKHFLYKLVEALY
TRTERELEPATFRVNGDTVDIMAAFGEFGNQCFRVMFFDNEVEAIQSIDPVTGQRIQSLD
SLTLYPTNLFVTTKERINTAVQQIYLDLGQQIEFFERAGRPMEAQRIKQRVEYDLEMIKE
LGYCPGIENYSRYFDGRAAGTRPFCLIDYFPKDYLMVVDESHVTLPQVHAMFGGDRARKE
NLVEYGFRLPAAKDNRPVTFAEFEQLQGTSIYVSATPADYELMKSEGVIVEQLIRPTGLV
DPPLEVRVTVNQIDDLIGEIDKRVKNDDKVLVTTITKRMAEELSKYFDRVGVRNRYIHSD
VDTLERIQILEDLRAGMFDVLVGVNLLREGLDLPEVALVAILDADKEGFLRNVRSLTQIA
GRAARHSQGNVILYADTCTDSMRYAIEQSNRRREKQVRYNMEHEMLPRRAQRSGTGQSTL
LTGRDTPDVNLTAYPIAEDHYAAVADVQKNYVASENIDALIDKAREEMERAAKSLDFLAA
AKFRDRMYELQKLREENRNKRN
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaactcgtatcggactacgccccgatgggcgaccaaccggaggcgatcgga
cagctggtgagctcgatcgaacacggctcgaagcacaacacgctgctgggcgtgacgggc
tccgggaagaccttcacggtggccaacgtcatcgcgcggctgaaccgtccgacgctggtg
ctgagccataacaagaccctcgcggcgcagctgtacggggagttcaagaacttctttccg
gaaaatgccgtggagtatttcgtctcctactacgactactaccagccggaagcctacctg
ccgtcgtcggacacctatatcgaaaaggacctccaaatcaacgccgagatcgagaaaatg
cgcctcgccacggtcgccacgctgctgtcgggacgccgcgacgtgatcgtcgtgtcgagc
gtctcgtgcctctacggcgcgggcaaccccgcggacttccacgccacggccatcaacatc
aaggtcgggcaggtcgtgagctacaagcacttcctctacaaactggtcgaggcgctctac
acccgcaccgaacgggagctggagccggcgacgttccgcgtcaacggcgacacggtggac
atcatggcggccttcggggagttcggcaaccagtgtttccgggtgatgttcttcgacaac
gaggtcgaagccatccagtccatcgaccctgtgacggggcagcgcatccagtcgctcgac
agcctgacgctctaccccacgaacctcttcgtgacgaccaaggagcgcatcaacaccgcc
gtgcaacaaatatacctcgacctgggccaacagatcgagttcttcgaacgcgccggacgc
ccgatggaggcgcagcgcatcaaacagcgcgtggagtacgacctcgaaatgatcaaggag
ctgggctactgccccggcatcgagaactattcgcgctatttcgacggccgcgccgccggg
acgcgccccttctgcctcatagactatttcccgaaagactatctgatggtcgtggacgaa
agccacgtcaccctgccgcaggtccacgccatgttcggcggcgaccgggcccgcaaggag
aacctcgtggagtacggcttccgcctcccggccgccaaggacaaccgcccggtgaccttc
gcggagttcgaacagctgcaaggcacctcgatctacgtgagcgccacgccggccgactac
gagctgatgaagagcgaaggggtgatcgtcgaacagctgatccgccccacggggctggtg
gacccgccgttggaggtgcgcgtgacggtgaaccagatcgacgacctgatcggagagatc
gacaagcgcgtgaagaacgacgacaaggtgctcgtgacgaccatcaccaaacgtatggcc
gaggagctctcgaaatatttcgaccgcgtgggcgtgcgcaaccgctacatccactcggac
gtagacacgctggaacgcatccagatcctcgaagacctgcgggccgggatgttcgacgtg
ctggtgggcgtgaacctgctgcgcgagggtctcgacctgccggaggtggcgctcgtggcc
atcctcgacgccgacaaggagggattcttgcgcaacgtgcgctccctcacgcagatcgcc
ggacgcgccgcccgccattcgcagggcaacgtcatcctctacgccgacacctgcaccgac
tcgatgcgctacgccatcgagcagagcaaccgccgccgggagaagcaggtgcgctacaac
atggagcacgaaatgctgccgcggcgtgcgcagcgcagcggcacgggacagagcaccctg
ctgacgggacgcgacaccccggatgtcaacctgacggcctaccccatcgccgaggaccac
tacgctgcggtggctgacgtgcagaagaactacgtggccagcgagaacatcgacgccctg
atcgacaaggcccgcgaagagatggaacgggcggccaaatcgctggatttcctcgccgcg
gcgaaattccgcgaccggatgtacgaattgcagaaactccgcgaggagaacagaaacaaa
cggaactga
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