KEGG   Alistipes senegalensis: NQ519_04065
Entry
NQ519_04065       CDS       T08441                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
asen  Alistipes senegalensis
Pathway
asen02020  Two-component system
Brite
KEGG Orthology (KO) [BR:asen00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NQ519_04065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:asen03021]
    NQ519_04065
Transcription machinery [BR:asen03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NQ519_04065
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_24 HTH_11 HTH_AsnC-type HTH_23 UPF0122 HTH_Mga HTH_40 HTH_38 TFIIE_beta HTH_10 HbrB HTH_36 HTH_Tnp_ISL3 HTH_5 HTH_28
Other DBs
NCBI-ProteinID: UWN66022
LinkDB
Position
complement(1050763..1051317)
AA seq 184 aa
MKEFNDRLLLELLKKDDEKAFSLLFESYYVPLCRYARLILKSEQPAEEVVMNVFIYIWEN
RTRIEIKSSLCAYLFRSVRNRCINYLRDNAPSVYLSDVMVELCSEENRDMEVEELNHFIE
EAILSLPDKCRDVFLKSRNEEMSNREIAEQLNISVKTVEAQITKALKTIRSYITDKMVLL
WMFF
NT seq 555 nt   +upstreamnt  +downstreamnt
ttgaaagagttcaacgatcgcctattgcttgaactgcttaaaaaggatgacgaaaaagca
ttcagcctccttttcgagagctattatgtccctttgtgccggtatgcgagactgatcctg
aaatccgaacaaccggcggaggaggtggtgatgaacgtcttcatctacatttgggaaaac
aggacacggatcgaaatcaaaagttcgttgtgcgcttatctgttccggtcggtaaggaac
cggtgcatcaattacctccgcgacaacgcaccttcggtttacctgagcgacgtgatggtc
gaactgtgcagcgaggagaaccgcgacatggaggtcgaagagttgaaccatttcatcgaa
gaggccatcctgtccctgcccgacaaatgccgggacgtatttctgaagagccgcaacgag
gagatgtccaaccgcgagatcgccgaacaactgaacatttcggtaaagacggtcgaggca
cagatcaccaaagcgctcaaaacgattcgcagctacataacggataagatggtcctttta
tggatgtttttttga

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