Alistipes senegalensis: NQ519_04065
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Entry
NQ519_04065 CDS
T08441
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
asen
Alistipes senegalensis
Pathway
asen02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
asen00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NQ519_04065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asen03021
]
NQ519_04065
Transcription machinery [BR:
asen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NQ519_04065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_24
HTH_11
HTH_AsnC-type
HTH_23
UPF0122
HTH_Mga
HTH_40
HTH_38
TFIIE_beta
HTH_10
HbrB
HTH_36
HTH_Tnp_ISL3
HTH_5
HTH_28
Motif
Other DBs
NCBI-ProteinID:
UWN66022
LinkDB
All DBs
Position
complement(1050763..1051317)
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AA seq
184 aa
AA seq
DB search
MKEFNDRLLLELLKKDDEKAFSLLFESYYVPLCRYARLILKSEQPAEEVVMNVFIYIWEN
RTRIEIKSSLCAYLFRSVRNRCINYLRDNAPSVYLSDVMVELCSEENRDMEVEELNHFIE
EAILSLPDKCRDVFLKSRNEEMSNREIAEQLNISVKTVEAQITKALKTIRSYITDKMVLL
WMFF
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
ttgaaagagttcaacgatcgcctattgcttgaactgcttaaaaaggatgacgaaaaagca
ttcagcctccttttcgagagctattatgtccctttgtgccggtatgcgagactgatcctg
aaatccgaacaaccggcggaggaggtggtgatgaacgtcttcatctacatttgggaaaac
aggacacggatcgaaatcaaaagttcgttgtgcgcttatctgttccggtcggtaaggaac
cggtgcatcaattacctccgcgacaacgcaccttcggtttacctgagcgacgtgatggtc
gaactgtgcagcgaggagaaccgcgacatggaggtcgaagagttgaaccatttcatcgaa
gaggccatcctgtccctgcccgacaaatgccgggacgtatttctgaagagccgcaacgag
gagatgtccaaccgcgagatcgccgaacaactgaacatttcggtaaagacggtcgaggca
cagatcaccaaagcgctcaaaacgattcgcagctacataacggataagatggtcctttta
tggatgtttttttga
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