Candidatus Arthromitus sp. SFB-mouse-Japan: SFBM_1285
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Entry
SFBM_1285 CDS
T01591
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
asf
Candidatus Arthromitus sp. SFB-mouse-Japan
Pathway
asf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
asf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SFBM_1285 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asf03021
]
SFBM_1285 (rho)
03019 Messenger RNA biogenesis [BR:
asf03019
]
SFBM_1285 (rho)
Transcription machinery [BR:
asf03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SFBM_1285 (rho)
Messenger RNA biogenesis [BR:
asf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SFBM_1285 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
Spore_III_AA
Angiomotin_C
Glutaredoxin2_C
Motif
Other DBs
NCBI-ProteinID:
BAK57045
UniProt:
F9VLN7
LinkDB
All DBs
Position
complement(1390072..1391475)
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AA seq
467 aa
AA seq
DB search
MNILKLEEMSLSELRQSARTLDIKNYSKLKKDDLIHRISELSPTIIEKDGVILVEKIKSK
MVKSTEQDCNINTENSGDKLDKFQDMILNSENANGVLEINDNNSFGFLRGKNYLTSMEDV
YVSPSQIRRFNLKTGDHIIGKVRDPKDGEKYRALLYVERINGFLPDEAIKRKNFEELTPI
YPNERLKLESGDGSDLSTRLMDIICPIGKGQRGMIVAPPKAGKTSILKKIAQNILKNNED
IKLIILLIDERPEEVTDMQRTIEGGEVIYSTFDEEPNQHVKVATMVLERAKRMVEHGKDV
FILMDSLTRLARACNLTIVPTGRTLSGGLDPGSLRIPKKFFGAARNFEQGGSLTILATAL
VDTGSRMDDMIFEEFKGTGNMEVHLDRKLQERRLFPSIDIYKSGTRKEDLLFTNDEREIS
FYLRRIMHREGNSENIIESLIKVFQNTRNNKEFIDYYKAIIDKDDNK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttgaaattagaagaaatgtctttatcagagcttagacaatccgctaggact
cttgatattaaaaattattctaaattaaaaaaggatgatcttattcataggatttctgaa
ttatctccaactataattgaaaaagatggtgttattttggttgaaaaaataaagtcgaag
atggttaaatctactgaacaagattgtaatattaacactgaaaatagtggggataaatta
gataaatttcaggatatgattttaaattctgagaatgctaatggtgttttggaaataaat
gataataatagttttggatttttacgaggaaagaattatttgactagtatggaagatgtt
tatgtttctccttctcaaataagaagatttaacttaaaaactggggatcatataataggt
aaagttagagatcctaaagatggtgaaaagtatagagctcttttatatgtcgagaggatt
aatggatttttaccagacgaggcgataaagaggaagaattttgaggaacttactcctatt
tatccaaatgagagattaaaacttgagagtggagatggaagtgatttatcgactagatta
atggatataatatgtcctataggtaaaggacaacgtggtatgattgttgcaccacctaaa
gctggtaagacaagtatattaaaaaaaatagcacagaatattttgaaaaataatgaagat
ataaaattaataattctccttatagatgaaaggcctgaggaagttactgatatgcaaaga
acaattgaaggtggggaagttatttattctacttttgatgaggaaccgaatcaacatgtt
aaagttgctacaatggtacttgaaagagctaagcgtatggttgaacatgggaaagatgtg
tttattttaatggatagtttaacgagacttgctagggcatgtaatttaacaattgtacct
acaggtaggactctatcaggggggcttgatcctggatcattgagaatacctaaaaagttt
tttggtgctgcaagaaactttgaacaaggtgggagccttacgatacttgcgacagctctt
gttgatacaggatctaggatggatgatatgatatttgaggaatttaagggtacaggtaat
atggaagttcatttagataggaaattgcaagaaagaagattgtttccaagtattgatata
tataaatcaggaactcgaaaagaggatttattgtttacaaatgatgaaagggaaatatct
ttctatcttagaagaataatgcatagggaggggaactctgaaaatataatagagagttta
ataaaggtattccagaatactaggaataataaagaatttattgattattataaagccata
attgataaagatgataataaataa
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