Aliarcobacter skirrowii: EI285_05330
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Entry
EI285_05330 CDS
T05743
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
ask
Aliarcobacter skirrowii
Pathway
ask00521
Streptomycin biosynthesis
ask00523
Polyketide sugar unit biosynthesis
ask00541
O-Antigen nucleotide sugar biosynthesis
ask01100
Metabolic pathways
ask01110
Biosynthesis of secondary metabolites
ask01250
Biosynthesis of nucleotide sugars
Module
ask_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
ask00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
EI285_05330 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
EI285_05330 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
EI285_05330 (rfbC)
Enzymes [BR:
ask01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
EI285_05330 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZL54028
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All DBs
Position
complement(1006294..1006884)
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AA seq
196 aa
AA seq
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MNYKRLEIPDLVLCEPKIHEDNRGFVFEAFKKDSFNNFLGFEVDFCQDNISYSKYGVIRG
LHTNTLDFAQSKLVSVLQGKILDVAVDFRVGSPSFGKVISLELDSFENKQLFIPRGFLHG
FSVLSQDAIVNIKIDRYFAAGESIGVRYDDKYLNIDWKIKKENIILGEGDKNLKSFKEVK
SPFMYDDNLYKTITKE
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaattataaaagattagagataccagatttagtactttgtgaacctaaaattcatgaa
gataatagaggatttgtttttgaagctttcaaaaaagatagttttaataattttttagga
tttgaagtagatttttgccaagataatatctcttatagtaaatatggagttattagagga
cttcatacaaatactcttgattttgcacaatcaaaacttgtaagtgtattacaaggaaag
attttagatgttgcagttgatttcagagttggaagtccaagctttggtaaagttatttct
ttagaactagatagttttgaaaataaacaactttttataccaagaggatttttacatggt
ttttctgttttaagccaagatgctattgtaaatataaaaatagatagatattttgcagca
ggtgaaagtattggagtacgatatgatgacaaatatttaaacattgattggaaaataaaa
aaagaaaatataatattgggtgagggcgataagaacttaaaaagttttaaagaggtaaaa
tcaccttttatgtatgatgacaatttatataaaactataactaaggaataa
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