Alligator sinensis (Chinese alligator): 102374003
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Entry
102374003 CDS
T02922
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B
KO
K12821
pre-mRNA-processing factor 40
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102374003 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
asn03041
]
102374003 (PRPF40B)
Spliceosome [BR:
asn03041
]
Complex A
U1 snRNP components
U1 related factors
102374003 (PRPF40B)
Complex B
102374003 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
DUF4936
SelB-wing_2
Motif
Other DBs
NCBI-GeneID:
102374003
NCBI-ProteinID:
XP_025068186
UniProt:
A0A3Q0H803
LinkDB
All DBs
Position
Unknown
AA seq
921 aa
AA seq
DB search
MAAFPTPPPSLVFSLCCWQSAPESGSGPSGQPAPFPSAPPMMPPPFMPPPGMPPPFPPMG
LPPLGPRPPAVPPMPPGLMPPMMPPMTAPPPMGQMPAMVPPLMPGMLMPGVPAGPVPVPR
AAAPGTEPLGAPPAQPAPAVSHCPLSACGPLPHFIPWDPGGLQVWEGAEGPVLESRSGVL
AGLRGAGVLARDMSRKKPPWTEHKAPDGRTYYYNCDSKQSTWEKPDELKSKAELLLSQCP
WREYKSDTGKSYYYNAQSKESRWTKPRDLDELEALIKEEEEAGRQQETPSAASSPSLSSA
ATTDTEATAADEQEPLALGAMAETPEEVMPLQEEVAGSADPSRREEDERGDVMPSAGSWS
TKEEAKQAFKDLLKDKGVASNASWEQAMKMIINDLRYSALPKLSEKKQAFNAYKAQREKE
EKEEARLRAKEAREELQRFLEQHERMSSTTRYRKAEQMFGELEVWAVVPERDRKEIYDDV
LFFLAKKEKEHTKQLRKRNIQALKNILDSMSNVSFQTTWSEAQQYLMDNPTFAEDEDLQN
MDKEDALICFEEHIRTLEREEEEEKEKTRLRERRQQRKNREAFQAFLDELHDKGQLHSMS
TWMELYPALSTDARFANMLGQPGSTPLDLFKFYVEDLKARFHDEKKIIKDILKDRGFSVE
VNTTFEDFAHVISFDKRAATLDAGNIKLTFNSLLEKAEAREREREKEEARKLRRREAAFK
SMLKQAAPPLEPGVTWDEVRERFVCDMAFEQITLESERIRLFREFIQVLETECQHSHAKA
KKHNKKGKKHHRKRPPAGGAVGERGLGPSPPLRPQGSDSEPDEQHHRAPKRKRRNHSDSG
SDASSSPASDHSSRKSKKQKKKSKKKRHKSDSPESGAERERDKGRRDPCRQSGWDTSESE
PSEGELEKRRRTLLQQLDDHQ
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcagctttccccaccccgcccccctcactggttttctctctgtgctgttggcagtct
gctcccgaatccggcagcggcccctcggggcagccggccccgttccccagcgcccccccc
atgatgccaccgcccttcatgcctcccccggggatgccgccccctttccctccaatgggg
ctacccccattggggccacggccgcctgccgtaccccccatgccccctggcctgatgccg
ccgatgatgccacccatgacagcgcccccgcctatgggacagatgccagccatggtgccg
cccttgatgccggggatgctgatgccgggggtgcctgccggccccgtccctgtgcccaga
gcggcggctcccgggacagagcccctcggggcccctccagcccagccggcgcccgcggtg
agtcactgccccctgtcagcctgcggccccctgccccacttcatcccctgggatcccggg
gggctgcaggtctgggagggggcagagggcccagtgctggagtccaggtcaggggtatta
gcagggctgaggggggctggagtcttggcccgcgacatgtcccgcaagaagcctccctgg
accgagcataaggcccccgatgggcgcacctactactacaactgcgactccaagcagtcc
acctgggagaagccggacgagctcaagtccaaagcagagctgctgctgtcccagtgtccc
tggcgcgagtacaagtcggacacaggcaagtcctattactacaacgcccagagcaaggag
tcgcgctggaccaagccccgggacctggatgagctggaggccttgatcaaagaggaggag
gaggccgggaggcagcaggagacgccatctgccgcctccagcccgtccctgtcctcagct
gccaccacggacacggaggccacagctgcagatgagcaggagccgctggcactaggggcc
atggccgaaaccccagaggaggtcatgccgctgcaggaggaggtggctggcagtgccgac
cccagccggcgggaggaggatgagcgtggggacgtgatgccgagtgccggcagctggagc
accaaggaggaagccaagcaggcgttcaaggacctgctgaaggacaagggcgtcgcttcc
aatgcatcgtgggagcaggccatgaagatgatcatcaatgacctgcggtacagcgccctg
cccaagctgagcgagaagaagcaggccttcaacgcctacaaggcccaacgcgagaaggag
gagaaggaggaggcgcggctccgggccaaggaggcccgggaggaactgcagcggttcctg
gagcagcatgagcgcatgagctccaccacccgctacaggaaagctgagcagatgtttggg
gagctggaggtctgggctgtggtcccagagcgtgaccgcaaggagatctacgatgatgtc
ctcttcttcctggccaagaaggagaaggaacacaccaagcagctgcgcaagcgcaacatc
caggcactgaagaacatcctggatagcatgagcaacgtcagcttccagaccacctggtcc
gaggcccagcagtacctgatggacaatcccaccttcgcagaggacgaggacttgcagaac
atggacaaggaggacgcactgatctgctttgaggagcacatccgcacgctggagcgggag
gaggaggaggagaaggagaagacacggctgcgtgaaaggcgtcagcagcgcaagaatcgc
gaggccttccaggccttcctggacgagctgcacgacaaggggcagctgcactccatgtcc
acctggatggagctgtacccggcactcagcaccgacgcccgcttcgccaacatgctgggg
cagcccggctccacgccgctggacctcttcaagttctacgtggaggatctcaaggcacgt
ttccacgatgagaagaagatcatcaaggacatcctgaaagaccgcggcttcagcgtggag
gtgaacacgaccttcgaggactttgcacatgtcatcagctttgacaagcgggcggccaca
ctggacgccggcaacatcaagctcaccttcaacagcctgctggagaaggcagaggcgcgg
gagcgggaacgggagaaggaggaggcgcggaagctgcggcggcgtgaggcggccttcaag
agcatgctaaagcaggcggccccgccactggagcctggcgtcacgtgggacgaggtgcgc
gagcgcttcgtatgcgacatggccttcgagcagatcacgctggagtcagagcggatacgc
ctcttccgcgagttcatccaggtgctggagactgagtgccagcactcccatgccaaggcc
aagaagcacaacaagaagggcaagaagcaccaccgcaagcgcccaccagctggcggggcg
gtgggggagcgggggctgggaccatcgccccccctgcggccgcagggctcggactcggag
ccggacgagcagcatcaccgcgcgcccaagcgcaagaggaggaaccactcggactcgggc
tctgacgcctcctcctcgcccgcctcagatcacagctcccggaagtccaagaaacagaaa
aagaaaagcaagaagaagagacacaaatcggacagccctgagagtggggccgagcgggag
cgggataagggccggcgggacccctgccggcagagcggctgggacacgtcggagagtgag
cccagcgaaggcgagctggagaagcggcgccggacgctgctgcagcagctggatgaccac
cagtag
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