Alligator sinensis (Chinese alligator): 102375045
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Entry
102375045 CDS
T02922
Symbol
SYNM
Name
(RefSeq) synemin
KO
K10376
desmuslin
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
asn04812
]
102375045 (SYNM)
Cytoskeleton proteins [BR:
asn04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
102375045 (SYNM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
102375045
NCBI-ProteinID:
XP_025055352
UniProt:
A0A3Q0G7D9
LinkDB
All DBs
Position
Unknown
AA seq
1384 aa
AA seq
DB search
MLTYSHGFLRNRTSVISALEEEKELLTTSIAEYLQEYQELLEMKASLSLELATYRALLEG
EDSQWVITWTDQQGREIPKDVRDASYNYSNVYSAYREGKKRPLPVIKSPDKSRILPLTDI
HSSALYSARATCARPRTSAGVKVVGKDVFGSTYRPSVPIRKDVTREAAKDHREFTTLTPV
HSLQKKTEIWQKTYPERKKAEATAASSVSFEKESTHVQKPNKDYAADTKPGISEGIRTKS
YELNSNFKQNEYEQKKAETRTVLQGNGERDKPTEEERRIILEKKKMDDKFTVEEKSINFG
KTEAQPGIEQKKHVIEEEVVNKRFILGDLPEWNKKVKDVALESRRKETIEIPVSFEMHSP
DKTSEASDVELTLEGLKTAAGREGDEWRTKHVDIHNENIPEREINLVDKDGVGDKSSPKI
SSSLTENIAENIVADILKSFVPSSGSETSADTKVTYHEKKDHSDAGKVKTEITIQSTVQD
EVDLGDVLNKDAKKGVLEDIEGTPSKEEIEDIINVGLKGREGMGKMSVNVEIIEEPLDSP
ADERSEFSTPFEVEEVEDTSPGLEGRYGDEEEHNLTMTGQNLKKKTEPCERFTHVEEVTE
AEETTDEQKYFVSVPDDHPSAQENEDDSVYGQIHIEEESTIKYAWQDEFLQGMQSKKDDG
MKSPEVTYQVVGEEASAHILKEEHARDEASHVESVVTEREIKIPHDFQTSIKELLSKETK
DPKHQLKEALEQLEGSLPESVKEELSALTKENQADSSNLAVDIKTVEKTDEGGSMTFVAE
VNLSQTLDPAQYDIQFDIPQFDDVIMSKMEKTSPWSPKKEGSEHDKQGSESPSGGKSSIQ
IDLSPGSNKPAPLASQEVYNFSSVRIGDGNEYHAPDQGPVSETLEFDSAGGVSPSHWSAD
INKHARHTSPTEIQRTEKRIYEGPISETLEISGTEGLVQTEGSSDISRSVKHFKLGPKEI
QTTEEIIYRGPVGLETGAPPNLAQLPFGTDINRSTRHVTVGSRQIVEEVTFEGPTSDSLE
AGGTGDLPQEGSADASRTIRHIILGPKEIHAEQVIFKGPISGSVEVSSTGDLSQTDSSVM
HIRLGQNQFQSTEKFIYEGPVPETVEPSSAKDLSHEISDTNTSVRHIKIGPKEFMTTEQI
IYEVPISEHLEFTEVGDRFHSEGSVKHIKLGQKEIKTEQILYQGSLSESSEFSSAGGSPS
ETGGTSDFDRSIRHFTMGPIETHSEHIIFKGPISEALEDISQTEGSSESSRSTRHIRLGP
KETSFTFQMDVTNVGAAPLVEEGEEAATIFVSSRKEPDVSRSRVIVGSDQKDAESESSKE
AGAFFHSSQDHSEQLTGKSVFNKTVELQRMVDQRSVVSDEKKIALLYLDKEEEEEEEDND
GQWF
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgttgacgtattctcatggtttcctgcgcaaccgaactagcgtaatcagtgccctcgaa
gaagaaaaggagctcctgacaacctcgattgccgagtacctgcaggaatatcaagaacta
ctggagatgaaagcaagcctcagccttgaacttgcaacttacagagccttgcttgaagga
gaagacagccagtgggtcattacatggactgatcagcaagggagagaaataccaaaagat
gtcagagatgcatcttacaactacagtaatgtttactcagcctaccgagaaggaaaaaag
agacccttgccagtaatcaagagtcctgacaaaagccgtatactaccactaacagatatc
cacagttccgcactttattcagctcgagcaacatgtgctagaccccgaacctcagctggc
gtgaaagttgtaggaaaagatgtatttggttcaacatatcgtccttcagtccctatcaga
aaggatgtgactcgagaagctgcaaaggaccacagagagttcacaacacttactccagta
cacagtcttcagaaaaagactgaaatttggcaaaaaacatatcctgaaagaaagaaagca
gaagctacagctgcttcctcagtttcttttgaaaaagagtcaacacatgttcagaagcca
aataaggactacgcagctgacacaaagccaggcatttccgaaggtataagaacaaaatct
tatgagctgaactccaattttaaacaaaatgagtatgaacaaaagaaagctgaaactcgt
actgtactgcaaggaaacggagaaagagacaaaccaactgaggaggagagacgcattatt
ttggagaaaaagaaaatggatgataaatttactgtggaagaaaaaagtattaattttgga
aagactgaggctcaaccaggcatagagcagaaaaagcatgtaatagaagaagaagtggtt
aataaaaggtttatattgggtgatctacctgaatggaacaaaaaggtcaaagatgtggcc
ttggaatcgaggaggaaggagactattgagatacccgtctcttttgaaatgcacagtcca
gacaaaacatcagaggccagtgatgtagaactaacattagaaggtcttaaaactgctgca
ggaagagagggggatgaatggagaacgaaacatgtcgatattcacaatgaaaatattcca
gaaagagaaatcaacctggtagacaaagatggagttggtgacaaaagcagccctaaaata
agttcttcactgacagaaaacatagcagaaaatattgttgctgatatacttaaaagtttt
gtgccatcttctggttcagaaacatcagcagatacaaaagttacttaccatgaaaagaaa
gatcattctgatgctggaaaagtgaaaaccgagatcacaatacaatctacagtccaagat
gaagttgacctaggagatgtattaaataaggatgctaaaaagggggttctggaagacatt
gagggaacaccctccaaagaggagatagaagatataattaatgttggcctgaaagggaga
gagggtatgggcaaaatgtctgttaatgttgagatcattgaggagccactagattctcca
gctgatgaaaggagtgaattttctacaccatttgaagtagaggaggtagaggatacatcc
ccgggcttagaagggcgttacggtgatgaagaggaacacaacctcacaatgacaggtcaa
aatctaaaaaagaaaacagagccttgtgagcgtttcactcatgtggaagaagtcaccgag
gcagaggagactaccgatgagcagaaatattttgtatctgttccagatgatcacccctca
gctcaagaaaacgaggatgactcggtgtacgggcaaattcacatagaggaagaatcaact
attaagtatgcttggcaagatgaatttttgcagggcatgcaaagtaagaaagatgatggc
atgaaatcaccagaagtaacgtatcaggttgttggggaggaagcaagcgctcatatctta
aaagaagaacatgcaagagatgaagcatcgcatgttgaatccgttgtcactgagagagag
attaaaatacctcatgactttcagacctcaataaaggaacttttatcaaaagaaaccaaa
gacccgaaacatcaattgaaagaggcactcgagcagttagagggaagccttccagagagt
gtgaaggaagaactatctgcattaacaaaagaaaatcaagccgactctagtaacctggca
gttgatataaaaacagttgagaagactgatgaaggtggttcgatgacatttgttgctgaa
gtcaacctatcccaaactcttgaccctgcccagtatgatatccagttcgatataccgcag
tttgatgatgtcatcatgagtaagatggagaagacttcaccgtggtctccaaaaaaagaa
gggtctgaacatgacaaacaagggtcagaaagtccgtctggtggcaaaagcagcatacaa
atagatctttccccaggcagtaataagcccgctcccttggctagtcaagaggtttataac
ttttccagtgtgagaatcggtgatggcaatgaatatcatgccccagaccaaggtccggtt
tcggaaactctggaatttgacagtgcaggaggtgtctccccctcacattggtcagcagat
attaacaaacacgcgaggcatacgagtccaacagaaattcagagaactgagaagaggata
tatgaagggcctatttctgaaactctagagatcagtggtaccgaaggtcttgttcagaca
gaagggtcatcggatatcagcaggtctgtgaagcattttaaactgggtcctaaagaaatt
caaaccactgaagaaattatttatagggggcctgttggtctagaaacaggtgcaccccca
aaccttgctcagttaccattcggcactgacattaataggtccacaaggcacgtcacggta
gggtcaaggcagattgtggaagaagttacttttgaagggcccacttcagactccttggag
gccggtggcacaggggatcttcctcaagaagggtcagcagatgccagcagaacaatacgg
catattatattaggtcccaaagaaattcatgctgagcaagtcatatttaaagggcccatt
tctggaagtgtagaggtcagtagcactggtgacctgtctcagactgacagttcagtaatg
cacattagattagggcaaaaccaatttcagtcaactgagaaattcatatatgaagggcct
gttccagaaacagtggaacccagcagtgcaaaagacctatctcatgagatttcagatact
aatacatctgttaggcatattaaaataggtcctaaagaatttatgacaactgagcaaatc
atctacgaagtccccatttctgaacatctggaattcactgaagtcggtgaccgttttcac
tctgaagggtcagtaaagcacattaagctaggtcaaaaggaaatcaaaactgaacagatc
ctataccagggctccctttctgaatcttctgagttcagtagtgcaggaggaagcccatca
gagactggaggaacctccgatttcgatagatccatcaggcactttacaatgggtcctata
gaaactcattctgagcacatcatcttcaaagggcccatctctgaagcattggaagatatt
tctcagacagaagggtcatcagagagcagcagatctacgagacacattagattaggaccc
aaggaaacttcttttactttccaaatggatgtaactaatgtaggggcagcccccttggtg
gaagagggagaagaagcagccacaatttttgtatccagtaggaaggagcctgacgtcagt
cggtcacgggtcatagttggaagtgaccagaaggatgcagagagtgaaagtagcaaagaa
gcaggtgccttttttcattcttcccaggatcacagtgaacaactaacagggaaatcagtg
ttcaataaaactgtagaactgcaaagaatggtagaccaaaggtcagtagtttctgatgaa
aagaaaattgcccttctctatctggacaaagaggaggaggaggaggaggaagataatgat
gggcaatggttctaa
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