KEGG   Alligator sinensis (Chinese alligator): 102375045
Entry
102375045         CDS       T02922                                 
Symbol
SYNM
Name
(RefSeq) synemin
  KO
K10376  desmuslin
Organism
asn  Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:asn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:asn04812]
    102375045 (SYNM)
Cytoskeleton proteins [BR:asn04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     102375045 (SYNM)
SSDB
Motif
Pfam: Filament
Other DBs
NCBI-GeneID: 102375045
NCBI-ProteinID: XP_025055352
UniProt: A0A3Q0G7D9
LinkDB
Position
Unknown
AA seq 1384 aa
MLTYSHGFLRNRTSVISALEEEKELLTTSIAEYLQEYQELLEMKASLSLELATYRALLEG
EDSQWVITWTDQQGREIPKDVRDASYNYSNVYSAYREGKKRPLPVIKSPDKSRILPLTDI
HSSALYSARATCARPRTSAGVKVVGKDVFGSTYRPSVPIRKDVTREAAKDHREFTTLTPV
HSLQKKTEIWQKTYPERKKAEATAASSVSFEKESTHVQKPNKDYAADTKPGISEGIRTKS
YELNSNFKQNEYEQKKAETRTVLQGNGERDKPTEEERRIILEKKKMDDKFTVEEKSINFG
KTEAQPGIEQKKHVIEEEVVNKRFILGDLPEWNKKVKDVALESRRKETIEIPVSFEMHSP
DKTSEASDVELTLEGLKTAAGREGDEWRTKHVDIHNENIPEREINLVDKDGVGDKSSPKI
SSSLTENIAENIVADILKSFVPSSGSETSADTKVTYHEKKDHSDAGKVKTEITIQSTVQD
EVDLGDVLNKDAKKGVLEDIEGTPSKEEIEDIINVGLKGREGMGKMSVNVEIIEEPLDSP
ADERSEFSTPFEVEEVEDTSPGLEGRYGDEEEHNLTMTGQNLKKKTEPCERFTHVEEVTE
AEETTDEQKYFVSVPDDHPSAQENEDDSVYGQIHIEEESTIKYAWQDEFLQGMQSKKDDG
MKSPEVTYQVVGEEASAHILKEEHARDEASHVESVVTEREIKIPHDFQTSIKELLSKETK
DPKHQLKEALEQLEGSLPESVKEELSALTKENQADSSNLAVDIKTVEKTDEGGSMTFVAE
VNLSQTLDPAQYDIQFDIPQFDDVIMSKMEKTSPWSPKKEGSEHDKQGSESPSGGKSSIQ
IDLSPGSNKPAPLASQEVYNFSSVRIGDGNEYHAPDQGPVSETLEFDSAGGVSPSHWSAD
INKHARHTSPTEIQRTEKRIYEGPISETLEISGTEGLVQTEGSSDISRSVKHFKLGPKEI
QTTEEIIYRGPVGLETGAPPNLAQLPFGTDINRSTRHVTVGSRQIVEEVTFEGPTSDSLE
AGGTGDLPQEGSADASRTIRHIILGPKEIHAEQVIFKGPISGSVEVSSTGDLSQTDSSVM
HIRLGQNQFQSTEKFIYEGPVPETVEPSSAKDLSHEISDTNTSVRHIKIGPKEFMTTEQI
IYEVPISEHLEFTEVGDRFHSEGSVKHIKLGQKEIKTEQILYQGSLSESSEFSSAGGSPS
ETGGTSDFDRSIRHFTMGPIETHSEHIIFKGPISEALEDISQTEGSSESSRSTRHIRLGP
KETSFTFQMDVTNVGAAPLVEEGEEAATIFVSSRKEPDVSRSRVIVGSDQKDAESESSKE
AGAFFHSSQDHSEQLTGKSVFNKTVELQRMVDQRSVVSDEKKIALLYLDKEEEEEEEDND
GQWF
NT seq 4155 nt   +upstreamnt  +downstreamnt
atgttgacgtattctcatggtttcctgcgcaaccgaactagcgtaatcagtgccctcgaa
gaagaaaaggagctcctgacaacctcgattgccgagtacctgcaggaatatcaagaacta
ctggagatgaaagcaagcctcagccttgaacttgcaacttacagagccttgcttgaagga
gaagacagccagtgggtcattacatggactgatcagcaagggagagaaataccaaaagat
gtcagagatgcatcttacaactacagtaatgtttactcagcctaccgagaaggaaaaaag
agacccttgccagtaatcaagagtcctgacaaaagccgtatactaccactaacagatatc
cacagttccgcactttattcagctcgagcaacatgtgctagaccccgaacctcagctggc
gtgaaagttgtaggaaaagatgtatttggttcaacatatcgtccttcagtccctatcaga
aaggatgtgactcgagaagctgcaaaggaccacagagagttcacaacacttactccagta
cacagtcttcagaaaaagactgaaatttggcaaaaaacatatcctgaaagaaagaaagca
gaagctacagctgcttcctcagtttcttttgaaaaagagtcaacacatgttcagaagcca
aataaggactacgcagctgacacaaagccaggcatttccgaaggtataagaacaaaatct
tatgagctgaactccaattttaaacaaaatgagtatgaacaaaagaaagctgaaactcgt
actgtactgcaaggaaacggagaaagagacaaaccaactgaggaggagagacgcattatt
ttggagaaaaagaaaatggatgataaatttactgtggaagaaaaaagtattaattttgga
aagactgaggctcaaccaggcatagagcagaaaaagcatgtaatagaagaagaagtggtt
aataaaaggtttatattgggtgatctacctgaatggaacaaaaaggtcaaagatgtggcc
ttggaatcgaggaggaaggagactattgagatacccgtctcttttgaaatgcacagtcca
gacaaaacatcagaggccagtgatgtagaactaacattagaaggtcttaaaactgctgca
ggaagagagggggatgaatggagaacgaaacatgtcgatattcacaatgaaaatattcca
gaaagagaaatcaacctggtagacaaagatggagttggtgacaaaagcagccctaaaata
agttcttcactgacagaaaacatagcagaaaatattgttgctgatatacttaaaagtttt
gtgccatcttctggttcagaaacatcagcagatacaaaagttacttaccatgaaaagaaa
gatcattctgatgctggaaaagtgaaaaccgagatcacaatacaatctacagtccaagat
gaagttgacctaggagatgtattaaataaggatgctaaaaagggggttctggaagacatt
gagggaacaccctccaaagaggagatagaagatataattaatgttggcctgaaagggaga
gagggtatgggcaaaatgtctgttaatgttgagatcattgaggagccactagattctcca
gctgatgaaaggagtgaattttctacaccatttgaagtagaggaggtagaggatacatcc
ccgggcttagaagggcgttacggtgatgaagaggaacacaacctcacaatgacaggtcaa
aatctaaaaaagaaaacagagccttgtgagcgtttcactcatgtggaagaagtcaccgag
gcagaggagactaccgatgagcagaaatattttgtatctgttccagatgatcacccctca
gctcaagaaaacgaggatgactcggtgtacgggcaaattcacatagaggaagaatcaact
attaagtatgcttggcaagatgaatttttgcagggcatgcaaagtaagaaagatgatggc
atgaaatcaccagaagtaacgtatcaggttgttggggaggaagcaagcgctcatatctta
aaagaagaacatgcaagagatgaagcatcgcatgttgaatccgttgtcactgagagagag
attaaaatacctcatgactttcagacctcaataaaggaacttttatcaaaagaaaccaaa
gacccgaaacatcaattgaaagaggcactcgagcagttagagggaagccttccagagagt
gtgaaggaagaactatctgcattaacaaaagaaaatcaagccgactctagtaacctggca
gttgatataaaaacagttgagaagactgatgaaggtggttcgatgacatttgttgctgaa
gtcaacctatcccaaactcttgaccctgcccagtatgatatccagttcgatataccgcag
tttgatgatgtcatcatgagtaagatggagaagacttcaccgtggtctccaaaaaaagaa
gggtctgaacatgacaaacaagggtcagaaagtccgtctggtggcaaaagcagcatacaa
atagatctttccccaggcagtaataagcccgctcccttggctagtcaagaggtttataac
ttttccagtgtgagaatcggtgatggcaatgaatatcatgccccagaccaaggtccggtt
tcggaaactctggaatttgacagtgcaggaggtgtctccccctcacattggtcagcagat
attaacaaacacgcgaggcatacgagtccaacagaaattcagagaactgagaagaggata
tatgaagggcctatttctgaaactctagagatcagtggtaccgaaggtcttgttcagaca
gaagggtcatcggatatcagcaggtctgtgaagcattttaaactgggtcctaaagaaatt
caaaccactgaagaaattatttatagggggcctgttggtctagaaacaggtgcaccccca
aaccttgctcagttaccattcggcactgacattaataggtccacaaggcacgtcacggta
gggtcaaggcagattgtggaagaagttacttttgaagggcccacttcagactccttggag
gccggtggcacaggggatcttcctcaagaagggtcagcagatgccagcagaacaatacgg
catattatattaggtcccaaagaaattcatgctgagcaagtcatatttaaagggcccatt
tctggaagtgtagaggtcagtagcactggtgacctgtctcagactgacagttcagtaatg
cacattagattagggcaaaaccaatttcagtcaactgagaaattcatatatgaagggcct
gttccagaaacagtggaacccagcagtgcaaaagacctatctcatgagatttcagatact
aatacatctgttaggcatattaaaataggtcctaaagaatttatgacaactgagcaaatc
atctacgaagtccccatttctgaacatctggaattcactgaagtcggtgaccgttttcac
tctgaagggtcagtaaagcacattaagctaggtcaaaaggaaatcaaaactgaacagatc
ctataccagggctccctttctgaatcttctgagttcagtagtgcaggaggaagcccatca
gagactggaggaacctccgatttcgatagatccatcaggcactttacaatgggtcctata
gaaactcattctgagcacatcatcttcaaagggcccatctctgaagcattggaagatatt
tctcagacagaagggtcatcagagagcagcagatctacgagacacattagattaggaccc
aaggaaacttcttttactttccaaatggatgtaactaatgtaggggcagcccccttggtg
gaagagggagaagaagcagccacaatttttgtatccagtaggaaggagcctgacgtcagt
cggtcacgggtcatagttggaagtgaccagaaggatgcagagagtgaaagtagcaaagaa
gcaggtgccttttttcattcttcccaggatcacagtgaacaactaacagggaaatcagtg
ttcaataaaactgtagaactgcaaagaatggtagaccaaaggtcagtagtttctgatgaa
aagaaaattgcccttctctatctggacaaagaggaggaggaggaggaggaagataatgat
gggcaatggttctaa

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