Alligator sinensis (Chinese alligator): 102377036
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Entry
102377036 CDS
T02922
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102377036 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
102377036 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102377036 (THOC1)
03041 Spliceosome [BR:
asn03041
]
102377036 (THOC1)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
102377036 (THOC1)
Spliceosome [BR:
asn03041
]
Complex C
Other components
EJC/TREX
102377036 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
102377036 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
102377036
NCBI-ProteinID:
XP_025065047
UniProt:
A0A3Q0GZZ3
LinkDB
All DBs
Position
Unknown
AA seq
667 aa
AA seq
DB search
MTNAYALLWNSTRDALHNKTLKPLLNAFNQIPGSESEKKCTLDQAFRVVVEEEIINKAVC
ENLLAIISLSINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVTTWKSSTFY
SAGKNYLLRMCNGEYGFSTETESEQKSYNTDLLRRLSKSQNTVFCGRIQLFLARLFPLSE
KSGLNLQSQFNLENVTVFNTNEQESTLGQKHTEEKEEGLEVEEGEMGDDEAPTSCSIPID
YNLYRKFWSLQDYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKT
GGEHVYFAKFLTSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSL
WIEDTTKAVYQLLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERPPDLKPIR
PVRKRPAPEDFLGRGPNKKILMGNEELTRLWNLCPDNMEACKSDSREYMPTLEEFFEEAI
EQADPENMVENAYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAK
ELPPPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKPMTGEQIESFANKLGEQWKVLAP
YLEMKDRDIRQIESDSEDVKMRAKQLLVAWQDQEGAHAIPENLITALNKAGLNDLAESLT
NDTENNS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgaccaatgcctatgctctgctatggaactcaacccgagacgctctacataacaaaact
ctcaaacctttattgaatgccttcaaccaaattcctgggagtgaaagtgaaaagaaatgt
accctggatcaagctttcagagttgttgtagaagaggaaattataaacaaggctgtatgt
gaaaatctcttggccatcatttctctttctatcaatggagtcacagaaggtatatgcaca
gcttcaactccttttgtgctcctgggagatgttctggattgccttcctttggatcagtgt
gacaaaatcttcacttttgtggagaaaaatgttaccacatggaagtcaagtacattttat
tcagctggaaagaattacttgctacgaatgtgcaatggtgagtatgggttctccaccgag
acagagagtgagcaaaaaagctacaacacagatcttctaagaagattatccaaatcacag
aacacagtcttctgtggaagaatacagctgttcctggctaggttgtttcctctttcagag
aagtcagggcttaatttacaaagtcagtttaatctggagaatgtcacagttttcaatacc
aatgaacaggagagcactctgggacagaaacacacggaggagaaagaggaaggactggaa
gtcgaagaaggtgaaatgggtgatgatgaagctcctacaagttgttccattccaatagat
tacaacctgtatagaaaattctggtcacttcaagattactttaggaatccagtgcagtgc
tatgagaaggtctcatggaaaacttttcttaagtattcagaagaagttttggctgttttt
aaaagctacaagttggatgacacacaggcctcacggaagaagctagaagagctgaaaaca
ggaggggagcatgtgtactttgcgaagttcctaactagtgaaaagctcatggatttgcag
ctgagtgacagtaacttccgccgtcacatcctgttgcagtatctgatattatttcagtat
ctaaaaggacaggtcaaatttaaaagttcaaactatgttctaactgatgaacaatccctc
tggattgaagatactacaaaagcagtttaccagcttctttcagaaaaccctccagatggg
gaaaggttctcaaaaatggtagagcatatactaaacactgaagaaaactggaactcgtgg
aaaaatgaaggctgcccaagctttgtgaaagagagaccaccagatttgaagccgataaga
cctgtgagaaagagaccagccccagaggatttcctaggaagaggaccaaacaaaaaaatt
ttgatggggaatgaggagctcacgcggctttggaatttgtgtcctgacaacatggaagct
tgtaaatctgacagtagggagtacatgccaacgctggaggagttctttgaagaagctatt
gagcaggcagatcctgaaaacatggttgaaaatgcgtacaaagctgtaaacaattctaac
tatggatggagagcattaaggttactggcacgcagaagtccccacttcttccagccgaca
aatcaacagtttaagagtttaccagaatacctagaaaacatggtaatcaaattggccaag
gaactgccgcctccttctgaagaaataaaaacaggcgaggatgaagatgaggaagataat
gatgctttattaaaggaaaacaatgaaagtccagaagtccaacgggacaaacctatgaca
ggggaacaaattgagtcatttgctaacaagctgggagagcagtggaaggtgcttgctccg
tacctggaaatgaaggaccgtgatataagacagattgagtcagacagtgaagatgtgaag
atgagagcaaagcaactgctggttgcctggcaggatcaagagggggcacatgccataccc
gagaacctgatcactgcactgaacaaagctggattaaatgaccttgctgaaagcctaaca
aatgatactgaaaacaatagttaa
DBGET
integrated database retrieval system
