Alligator sinensis (Chinese alligator): 102377674
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Entry
102377674 CDS
T02922
Symbol
UPF3A
Name
(RefSeq) regulator of nonsense transcripts 3A isoform X1
KO
K14328
regulator of nonsense transcripts 3
Organism
asn
Alligator sinensis (Chinese alligator)
Pathway
asn03013
Nucleocytoplasmic transport
asn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
102377674 (UPF3A)
03015 mRNA surveillance pathway
102377674 (UPF3A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
asn03019
]
102377674 (UPF3A)
Messenger RNA biogenesis [BR:
asn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
102377674 (UPF3A)
mRNA cycle factors
P-body specific factors
102377674 (UPF3A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
102377674
NCBI-ProteinID:
XP_006033455
UniProt:
A0A1U7SMZ4
LinkDB
All DBs
Position
Unknown
AA seq
449 aa
AA seq
DB search
MKCCLTEVVKGLELRQGSDGGQIGFEQVVIRRLPPCLTKEQLEEQLHPLPAHDYFEFCTA
DPSLYPHLYSRAYINFRNPEDILLFRDRFDGYVFIDNKGLEYPAVVEFAPFQKISKKKLK
KKDAKAGSIEDDPEYRKFLESYCADEEKICANPETLLGEIEAKTRELIARRTTPLLEYIK
NRKLEKQRIREEKREERRRRELEKKRLREEEKRKRREEERRKRKEAEKQKKIAEKEIRIK
LLKKPEKGDEQASEKHKEKGEEADIEEGKWEKSSGSGSIKSKSLEGPLKELKEKSQNDSD
KEQRDLERRFREKEPERQRYRLDDGRKHRAHYEFDKFVRRNEEELKWGKGYNQDRGKKGN
HNYSFTVEAVDKLGKEDKCDDMASKKERIRNKDRPAMQLYQPGARIRTHTGSTNKTYDCY
GKFSEDTCDRKYEADNLTGGGSEKSEEAE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttgcttgacagaggtggtcaaaggactggaactgcggcaaggcagtgatgga
ggtcagataggatttgagcaggtagttattcgccggcttcctccttgcctaactaaagag
cagctggaggagcagctgcatcctctacctgcccatgattattttgaattttgcactgct
gatcccagcctttatccacatctctactccagagcatacattaactttagaaatcctgag
gacatccttctttttagagatcgatttgatggctatgtcttcattgataataaaggtttg
gaatatcctgctgtggtagaatttgcaccatttcaaaagatttcaaaaaagaagctaaag
aaaaaagatgcgaaagctgggagcattgaagatgatccagaatatagaaaatttttagaa
agttattgtgccgatgaagagaaaatctgtgccaatcctgagactctgttgggagagatt
gaggcaaaaacaagggaactcattgctagaagaacaacacctcttttggaatatattaaa
aatagaaaattagaaaagcagaggatacgggaagagaaaagagaagaacggaggagaagg
gaactggaaaagaaacgtctgagagaagaagagaaaagaaagcgcagagaagaagaaaga
cgtaaaagaaaagaagcagagaagcaaaagaaaattgctgaaaaagaaataaggatcaag
cttcttaagaagcctgaaaagggagatgaacaggccagtgaaaaacacaaggaaaaagga
gaagaagctgatattgaagaaggcaaatgggaaaaatcatctggatctgggagtataaaa
tccaagtcattggagggtccattaaaggaacttaaggaaaagtcacaaaatgatagtgat
aaagagcaaagggatttggagagaagatttcgagaaaaagaacctgaaagacaaaggtat
cggttggatgatggcagaaagcatagagcgcactatgagtttgacaagtttgtgagaagg
aatgaagaagagctgaaatgggggaaaggatacaaccaagacagaggaaagaaagggaac
cacaactacagcttcactgtggaggcagtagacaaactgggtaaagaggacaagtgtgat
gacatggcatccaaaaaggagcgcataagaaataaggatcgtccagccatgcagttatac
cagcccggagctcgcattcgaacacatacggggtctacaaataaaacctatgactgctat
gggaagttctctgaagatacctgtgatagaaaatatgaggcagataatttaactggaggt
ggttctgagaagagtgaagaagcagaataa
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