Alligator sinensis (Chinese alligator): 102387238
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Entry
102387238 CDS
T02922
Symbol
SCN4A
Name
(RefSeq) sodium channel protein type 4 subunit alpha isoform X1
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
asn04040
]
102387238 (SCN4A)
Ion channels [BR:
asn04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
102387238 (SCN4A)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
GPHH
IQ
FUT8_N_cat
Motif
Other DBs
NCBI-GeneID:
102387238
NCBI-ProteinID:
XP_006017947
UniProt:
A0A1U7R663
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MASPPYLPGPDNLRLFTRESLAAIEQRIAEEEALKLKRQHVEVLDEEERKARSDLEAGKS
LPLIYGDPPPELIGVPLEDLDPFYRDQKTFIVLNKGKSIFRFSATPAVYLLGPFNPIRRG
AIKVLIHSLFSMFIMITILTNCVFMTMSDPPPWSKNVEYTFTGIYTFESMIKILARGFCI
DSFTFLRDPWNWLDFSVIVMAYTTEFVDLGNISALRTFRVLRALKTITVIPGLKTIVGAL
IQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVRWPPPFNETMQEDIFGMDNDTF
VNATLYGNLTGSGNNTFDYDAYMNDEGNFYFLEGALDALLCGNSSDAGKCPEGYECMKAG
RNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVLIIFLGSFYLI
NLILAVVAMAYAEQNDATALEIQQKEEEYQKLLEQLKKHQEEQAKMLKDRKLSACSATQK
KKGDSDQDADSDQDKLKDCNGRVVPKVVLERSVTVRERNPSDDQDKLDYNHLAVGPQDGP
SLQKRAESVASIISSTMEELEEAHRKCPPWWYKFAKTFLVWDCCLPWLKLKAFVKLIVLD
PFVDLGITICIVLNTLFMAMEHYPMTEEFENVLTVGNLVFTGIFTAEMVLKLIALDPYDY
FQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSV
GALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCKISADCTLPRWHMHDFFHAFLIVFRI
LCGEWIETMWDCMEVAGQAMCLLVFMLVMVIGNLVVLNLFLALLLSSFSADSLAASDDDG
EMNNLQIAIGRITRGIDFVKKTVLMLLHRQWKEKKDPDEEQEESKTDNYVLNHMDSGQDS
KSDFMDGVAGKEHISVDHVDHMNFINNPNLTVQVPIASEESDLYDETSTQSDTEDTKKPL
SHGSTSSMGSTVDYKPPVAEVEEVVEEATEGTEPENCFTEACVQRFPFLYVDITTDKGKI
WWNLRKTCFKIVEHNWFETFIIFMILLSSGALAFEDIYIEQRKVIRTILEYADKIFSYVF
VIEMLLKWVAYGFKVYFTNAWCWLDFLIVDVSIISLTANWLGYSELGAIKSLRTLRALRP
LRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKYYRCINTTTDE
LFEIEVVNNKSDCLALLDTNQVRWVNVKVNFDNVGLGYLSLLQVATFKGWMDIMYAAVDS
REIEEQPLYETNLYMYIYFVIFIIFGAFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQ
KKYYNAMKKLGSKKPQKPIPRPQNQIQGVVYDFVTKQVFDITIMVLICLNMVTMMVETDD
QSEAKIEILQTVNLIFIIIFTGECVLKMFALRYYYFTIGWNIFDFVVVILSIVGLVLSDV
ISKYFVSPTLFRVIRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIY
SIFGMSNFAYVKKESGIDDIFNFETFGNSIICLFQITTSAGWDGLLNPILNSGPPDCDPH
LENPGSSVKGNCGNPSMGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLCEDD
FEMFYETWEKFDPDATQFITYSTLSDFVDTLQEPLKIAKPNKIKLVTMDLPMVPGDKIHC
LDILFALTKEVLGDSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAVKIQR
AFRRYLLKRSVKQASYLYRHSKEEDTLMEEAPEKEGLIASKMNWNYGTREVETAPTLSLK
PVLSSETPGAPSEEKKLDEKRNVKESFV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcccgccatacttaccaggtccagacaacctccgcctttttacccgcgaatct
cttgctgcaatagaacagcggattgctgaggaggaagcgctcaagttaaagcggcagcat
gtggaagtgctggacgaagaagaacgaaaggcccgtagtgatctggaagctggaaagagc
ctcccacttatttatggggacccacctccagaactcattggggtgcctctagaagaccta
gaccctttctacagagatcaaaagacattcatagtcctaaacaaagggaaatcaatcttc
cgattctcagcaacccctgctgtctacttgctgggacccttcaaccccatcagaagaggt
gccatcaaagtgcttatacattcattattcagtatgttcatcatgatcaccattttaacc
aactgtgtgtttatgacaatgagcgaccccccgccatggtccaagaatgtggaatacacc
ttcactggaatatatacctttgagtccatgataaagatcctagcaagagggttttgcatt
gacagttttacattcctgcgagatccgtggaactggctggatttcagtgtcattgttatg
gcttataccacagagtttgtggatttgggaaatatctctgctttaagaacgttccgtgtc
ctccgtgcactgaaaacgattacagtaattccaggactgaagaccattgttggagccttg
atacagtctgtgaagaagctctccgatgtcatgatactcacagtcttctgtctcagcgtg
tttgcacttattggtcttcagttgttcatgggcaaccttcggcacaaatgtgtcaggtgg
ccaccccctttcaatgagactatgcaagaggacatctttggaatggacaatgacaccttt
gtgaatgcaacactctatggcaacctgactggatctggtaacaataccttcgattatgat
gcttatatgaacgatgaagggaatttctacttcctggagggagcgcttgatgccctgctc
tgtgggaatagcagcgatgctgggaagtgccctgaaggctatgaatgtatgaaagcagga
aggaacccaaactacggctacactagttatgacacatttagctgggctttccttgctctc
ttccgcctcatgactcaggattactgggagaacctcttccagctgactctacgtgcagct
gggaaaacttacatgatcttctttgttctgattatattccttggttccttctacctcatc
aacctgatcctggctgtggtagccatggcatatgcagagcaaaatgatgctactgcactg
gaaatacagcagaaggaggaggagtatcagaagcttctggaacagctgaaaaagcatcag
gaggaacaagcaaaaatgttaaaagaccgtaagttaagtgcttgctctgcgactcagaaa
aagaagggcgactcggaccaagatgcagacagcgaccaagacaaattgaaagactgcaat
ggcagagtcgtccccaaggttgtgctggagcgatctgttacagtaagggaacgcaatccc
agtgatgaccaagataaattggattataaccacctggcagtgggcccacaagatggtccc
agccttcagaagagagcagagagtgttgccagtattatctctagcaccatggaagagtta
gaggaagctcacaggaagtgcccaccctggtggtataaatttgccaaaacgttccttgtc
tgggactgctgtcttccgtggctgaaactgaaggcatttgttaagctgatagtgctggac
ccttttgtcgacctggggatcaccatctgcatagtgctcaacacactgttcatggccatg
gaacactatccgatgactgaagagtttgagaatgtgctgactgtggggaacctggtcttt
actgggatcttcactgctgagatggttttaaagctcatagctttggacccatatgactac
tttcagcagggttggaacatatttgacagtatcatcgtcaccctgagcttggtggagctg
ggcctggctaatgtgcaggggctctctgtgctccgatctttccgtctgctcagagttttc
aagcttgccaagtcctggccaaccctcaacatgctcataaagatcataggcaactccgtg
ggtgctctcgggaacctcacccttgtgctggccatcattgtcttcatctttgctgttgtg
ggcatgcagctgtttgggaagagctacaaggagtgtgtgtgcaagatctccgctgactgc
acactgccccgctggcacatgcatgacttcttccacgccttcctcattgtcttccgcatc
ctgtgcggagagtggattgagaccatgtgggactgcatggaggtggcaggccaagccatg
tgcctcctcgtcttcatgttggtgatggtcattgggaaccttgtggtcctgaacctgttc
ttagcgttgctgctgagttccttcagtgctgatagccttgcagcttctgatgatgatgga
gagatgaacaatttgcagattgctattggcaggatcaccagggggattgactttgtaaag
aaaactgtcctaatgctacttcacaggcagtggaaggagaagaaagacccggatgaggag
caagaggagagtaagacagacaactatgtcctaaaccatatggactctggccaggattcc
aagtcggattttatggatggagtagctgggaaagagcatatctctgtagatcatgtggat
cacatgaatttcattaataaccccaatctgactgtccaagtgccaattgcctcagaggaa
tctgacctctacgatgaaacaagcacccagtctgacacagaagacaccaagaagccactg
tcccacgggagcacatcatccatgggtagcaccgtagattacaagccacctgtagctgag
gtggaggaggttgtggaggaggctacggagggcaccgagcctgaaaactgcttcactgag
gcttgtgtgcagaggtttcccttcctttatgttgacatcacaactgacaaagggaaaata
tggtggaaccttcggaaaacctgcttcaagatcgttgaacacaactggtttgagaccttc
atcatctttatgatcctcctcagcagtggagcactggcttttgaagacatctatatagag
cagcgtaaggtcatacgtaccatcctggaatatgccgacaagatcttctcctatgtcttc
gtcattgagatgctgctcaagtgggtggcctatggcttcaaagtgtatttcaccaatgcc
tggtgctggctggattttctcattgtcgatgtttccattatcagcttgacagcaaactgg
ttgggatactcagaactgggagccatcaagtcactgaggactctgagagctttgagacct
ttgcgagctctgtccagatttgaaggcatgagggtagtagtaaatgccctgctgggagcc
atcccctccattatgaatgtcttgctggtctgtctgatcttctggctgatattcagcatc
atgggtgtgaacctgtttgcggggaagtactaccggtgcatcaacaccaccacagacgag
ctctttgaaatcgaagtggtgaataataaaagcgactgcttggccctccttgataccaac
caggtccgatgggtgaatgtcaaggtcaactttgacaatgttgggttaggctacctctcc
ctgctgcaggtggccacctttaaaggctggatggacatcatgtatgcagcggtggactcc
cgtgagattgaagagcagccactgtatgagaccaacctctacatgtacatctacttcgtc
atcttcatcatctttggtgccttcttcactctcaacctcttcattggggtcatcattgat
aactttaatcagcaaaagaaaaagtttggaggaaaggacatcttcatgacagaagagcag
aagaaatactataatgccatgaaaaagctgggatcaaagaaaccccagaagccaatcccc
aggccccagaaccaaattcaaggcgtggtgtatgactttgtaacaaagcaagtgtttgac
ataactatcatggtcctgatttgtcttaacatggtgaccatgatggttgaaacagatgac
caaagtgaagccaaaattgaaattctccagactgtcaacctgattttcatcatcatcttc
actggcgagtgtgtgctcaaaatgtttgccctgcgctactattacttcaccattggttgg
aacatctttgactttgtggtggtcattctctccattgtaggtctcgtcctttcagatgtc
atttcgaaatattttgtgtcacccaccctctttagggtgattcggctggccaggattggg
cgtgttcttcgtctaatcagaggagcaaaaggcatccggactctgctttttgccctcatg
atgtccctaccagctttgttcaacattggactcctgctcttcctggtgatgtttatctac
tccatctttgggatgtccaactttgcctatgtgaagaaagagtctgggattgatgacatc
ttcaactttgaaacttttggtaatagcatcatttgtttgttccaaatcactacatcagca
ggatgggatggcctcctcaaccctatcctgaacagcggccctccagactgcgacccccat
ttggagaaccctggcagttcggtgaaaggaaactgtgggaatccatctatgggcatctgc
tttttctgtagctatatcataatttccttcctgattgttgtgaacatgtatattgccatc
attcttgagaacttcaacgttgctacagaggagagcagcgaacccctttgtgaagatgac
tttgagatgttttatgaaacatgggagaaatttgatccggatgccacccagtttatcacg
tacagcaccttatctgactttgtcgacaccttacaagagccacttaaaattgccaagcca
aacaagattaaattggtcaccatggatttaccaatggtccccggggacaaaatccactgt
ttggacattctgtttgctctgacaaaagaagtcttgggtgactcaggagaaatggatgct
ttgaaagaaacaatggaggagaaatttatggctgcaaatccatccaaggtttcctatgaa
cccatcactacaactttgaaaagaaaacatgaagaagtatgtgctgtaaaaatccaaaga
gccttccgcaggtaccttctaaagcggtccgtgaaacaagcctcctacctctacaggcat
agtaaagaggaggacaccctaatggaagaagcaccagagaaagaaggactgatcgcaagc
aaaatgaactggaattatgggacaagagaagtagaaacagccccaaccctgtctcttaaa
ccagttctaagttcagagactccgggtgctcccagtgaagaaaaaaaattggatgagaaa
cgtaatgtgaaagaatcatttgtataa
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integrated database retrieval system
