Alligator sinensis (Chinese alligator): 102387404
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Entry
102387404 CDS
T02922
Symbol
RC3H2
Name
(RefSeq) roquin-2 isoform X1
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
asn
Alligator sinensis (Chinese alligator)
Brite
KEGG Orthology (KO) [BR:
asn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asn03000
]
102387404 (RC3H2)
04121 Ubiquitin system [BR:
asn04121
]
102387404 (RC3H2)
Transcription factors [BR:
asn03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
102387404 (RC3H2)
Ubiquitin system [BR:
asn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
102387404 (RC3H2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_UBOX
zf-RING_2
zf-CCCH_4
zf-C3HC4_3
Prok-RING_4
zf-C3HC4
zf_CCCH_4
zf-C3HC4_4
zf-C3HC4_2
Xin
Motif
Other DBs
NCBI-GeneID:
102387404
NCBI-ProteinID:
XP_014382246
UniProt:
A0A1U8DPI4
LinkDB
All DBs
Position
Unknown
AA seq
1191 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDENVHKPISLGCSHTVCKTCLNKLHRKACPFDQTAINTD
IDVLPVNFALLQLVGAQVPDHQTVKLSNLGENKHYEVAKKCVEDLALYLKPLSGGKGVAS
LNQSALSRPMQRKLVTLVNCQLVEEEGRVRAMRAARSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEEALKLVLLALEDGSALSRKVLVLFVVQRLEPRFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRSYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLAHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLNRLRPHLELLANI
DPNPDATSPTWEQLENAMVAVKTVVHGLVDFIQNYSRKGHEAPQPQPNSKYKTSMCRDLR
QQGGCPRGTNCTFAHSQEELEKYRLRNKKISATVRTFPLLNKVGVNSTVSTTTGNVISVI
GSPETTGKMVPSTNGIASLESGVPQLIPRCADTSLRSLENVKKGAKSGANGHNISGSPTE
SLSENKIGSPPKTPVSQAAATSAGPPNIGTEMNSVPPKSSPFVPRVPVYPPHSDNVQYFQ
DPRAQMSYEVPQYPQTGYYAPPPTVPAGVAPCVPRFVRSNNVPESSLPPASVPYADHYST
FPPRDRLNSPYQPPPPQPYGPVPPVPSGMYAPVYDSRRIWRPQMYPRDDIIRSNSLPPMD
VMHSSVYQTSLRERYNSLDGYYSVACQPPNEQRTVPLPREPCGHLKTSYDDQLRRKPEQW
AQYHTQKTPLVSSTLPMAATSPTPPSPLFNVDFSTEFSESVTDLSGTKFEEDHLSHYSPW
SCGTIGSCINAIDSEPKDVIANSNTVLMDLDSGDVKRRVHLFETQRRAKEEDPIIPFSDG
PIISKWGAISRSSRTGYHTTDPIQATASQGSATKPISVSDYVPYVNAVDSRWSSYGSDST
SSARYIERDRFIVTDLSGHRKHSSTGDLLSIELQQAKSNSLLLQREANALAMQQKWSSLD
EGSRLTLNLLSKEIDLRNGESDYTEDCADAKPDRDIELELSALDTDEPDGQGEQIEEILD
IQLGISSQEDQLLNGTTVENGHSLKQRQKEPLEQKRQSLGEDLVILEEQKAILPVTSCFS
QPITASVSNASCLPISTSVSVGSLILKTAHIMSEDKNNFLKPAVNGKMVNS
NT seq
3576 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgcaggcagctcagtggacagagtttctgtcctgtccaatctgctacaacgag
tttgatgagaatgtgcacaaacccatcagtttaggttgctcccacactgtctgtaagacc
tgcctgaacaagcttcatcgcaaggcatgtcctttcgaccagactgctatcaatacagac
atcgatgtgcttcctgtaaactttgcacttcttcaattagttggagcccaggtaccagat
catcagacagtaaagttaagtaacctaggagagaacaaacattatgaggtagcaaagaag
tgcgttgaggatttggcactatacctgaaaccactaagtggaggaaagggtgttgctagt
ttgaatcagagtgcactgagccgtccaatgcaaaggaagctggtgacgctggtaaattgt
cagctggtggaggaggagggtcgggttagagccatgcgtgcagctcgttcacttggagaa
agaactgtaaccgaattgattttgcagcaccaaaatcctcagcagctgtctgccaatctt
tgggctgctgtcagggcacgaggatgccagttcctagggccagctatgcaagaagaagct
ttgaagcttgtattactggcactggaagatggctctgcactctcaagaaaagttttagta
ctttttgttgtgcaaagactagaaccaagatttcctcaggcatctaaaacgagcattggt
catgttgtgcagctactgtatagagcatcatgctttaaggtcacaaaaagggatgaagat
tcttctctgatgcagctgaaagaggaatttcggagttatgaagctttgcggagggagcat
gatgcccaaattgttcacattgccatggaagcagggcttcgaatatcaccagaacagtgg
tcttcccttctttatggtgacttagcacataagtcacacatgcagtccattattgataag
cttcaatcgccagagtcatttgcaaagagtgtacaggagttgacaattgtcttgcaacgt
acaggtgatccagcaaacttaaacagactgaggcctcacttagagcttctagcaaacata
gatcctaatccagatgcaacgtctccaacatgggagcagctggagaatgcaatggtggct
gtgaagactgtggtacatgggctggtggactttattcagaactatagtagaaaagggcat
gaagcaccacagccacaaccaaacagcaaatataaaacaagtatgtgccgagatctgcga
caacaagggggatgtccacgaggaactaactgtacattcgctcactctcaggaagagctt
gaaaagtatcgtttaaggaacaaaaaaatcagtgcaacagtgagaaccttccctcttcta
aataaagttggtgtaaacagcactgtttcaaccacaacgggaaacgtaatctctgtcata
ggaagccctgaaacaacagggaagatggtgccaagtactaatgggattgcaagtctggaa
agtggtgttccccaattgattccccgctgtgctgacacttccttaagatctttggagaat
gtcaagaaaggggcaaaatctggagccaatggtcacaacatctctggatcccctacagaa
tcattatctgaaaataaaattggttctccacccaagactcctgtaagccaggcagcagct
acctcagctggtcctcctaatattggaacagagatgaattctgtgcctccaaaatccagc
ccatttgtacccagagtaccagtctatcctccacattctgataatgttcagtattttcaa
gatccgcgggcccagatgtcctatgaagttccacagtacccacagacgggatactacgca
ccacctccaacagtaccagctggtgtggctccctgtgttcctcgctttgtgaggtccaat
aacgttccagaatcctccctcccacctgcttccgtgccatatgccgatcattacagtaca
tttccccctcgagatcgactgaattctccttaccaacctcctcctccgcagccgtatgga
ccagttcctcctgtcccttctggaatgtatgccccagtgtatgacagcaggcgtatctgg
cgtccacagatgtacccaagagatgatattattaggagcaattctttacctccaatggat
gtgatgcactcatctgtctatcagacatcattgcgtgagagatataactctttggatggg
tattactctgtggcttgccagcctccaaatgagcaaaggactgtgcctttaccaagggag
ccttgtggtcacttgaagaccagttatgatgatcagttacgacgaaagccagagcagtgg
gcacaataccacacacagaaaacccctcttgtatcctcaacgcttcctatggcagcaaca
tctccaacaccaccttctcctctcttcaacgtggacttcagcacagagttttcagagagt
gttactgacttgagtggtactaaatttgaagaagaccatctttcccactactcaccctgg
tcctgtggcactattggctcctgcataaatgctatcgattcagagcccaaggatgtaatc
gccaattcaaatactgtgttaatggatttggacagtggagatgttaaaaggagagtgcat
ttgtttgaaactcaaagaagggcaaaagaagaagatcctatcattccctttagcgatgga
ccgatcatctccaagtggggtgcaatctccagatcatctcgcacaggttatcacacaaca
gaccctattcaagccactgcttcccaaggaagtgctactaagcccataagtgtatcagat
tatgtcccatatgtcaatgctgttgattcaagatggagttcttatggctcagattccact
tcatcagcgcgctatatagaacgggataggttcatagtgaccgatttatctggtcacaga
aagcattccagcactggagatttactgagtattgaactacagcaggccaaaagtaattca
ttgttacttcagagggaggctaatgcgctagccatgcaacagaagtggagctctctagat
gaaggcagtcgccttaccttaaatcttttaagcaaggaaattgatttgaggaatggtgag
agtgactatactgaagactgtgcagatgcaaagccagatcgagacattgaattagagctt
tcagcccttgataccgacgaacctgatggacagggcgaacaaatagaggagatcctggac
atacagctaggtatcagttcacaagaagatcagctgctcaatgggacaactgtagagaat
ggtcattcactaaagcagcgccaaaaggaacctttggagcagaagagacaaagtttaggt
gaagaccttgtgattctggaggagcagaaagcaatcctgcccgtaacttcttgcttcagt
cagcccatcacagcatctgttagcaatgcaagctgcctgcccatcagcacatcagtcagt
gttggcagcctcattttgaaaactgctcacattatgtctgaggataaaaacaacttttta
aagccggctgtgaatggcaagatggttaacagctga
DBGET
integrated database retrieval system
