Alteromonas stellipolaris LMG 21861: AVL57_11000
Help
Entry
AVL57_11000 CDS
T04545
Name
(GenBank) Fis family transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
asq
Alteromonas stellipolaris LMG 21861
Pathway
asq02020
Two-component system
asq02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
AVL57_11000
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
AVL57_11000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
asq03000
]
AVL57_11000
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
asq02035
]
AVL57_11000
Transcription factors [BR:
asq03000
]
Prokaryotic type
Helix-turn-helix
Other families
AVL57_11000
Bacterial motility proteins [BR:
asq02035
]
Flagellar system
Flagellar assembly proteins
Others
AVL57_11000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
FleQ
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
AAA_16
Mg_chelatase
AAA
AAA_7
bpMoxR
AAA_19
AAA_2
Ribophorin_II
Motif
Other DBs
NCBI-ProteinID:
AMJ74446
LinkDB
All DBs
Position
complement(2305035..2306486)
Genome browser
AA seq
483 aa
AA seq
DB search
MKDILLVSDSQELIHSLETIVTFLGESCQSRGLSDCESYLKEKGADAVLIEYASPSVINS
LVARFPHIPFVAILHSNGEVAASCNLVSVITLPLTYPVLTQSIHRCQEYSRRKPGKTRAG
GSKTRLFRSLVGKSDEIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFLSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERIYERVGGSKPLQCNVRIIAATHRHLETMIKEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVDSVRFTERAIASLMEHNWAGNVRELSNLVERLSILY
PGQIVDVADLPEKYQYGEIQAYEPDYPEELLERDAFNALFAESASQEHFDEPEEENSLPL
SSSLPEEGVNLKEYLSELEITLIRQALEQQEWVVARAADKLGMRRTTLVEKMRKYDIQRM
EEV
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatattttgctggttagtgatagccaggaactaattcatagcttagaaaccata
gtcacctttttgggagagtcgtgtcagtcacgagggctttctgactgtgaaagttacctg
aaagaaaagggcgcagatgcggtacttattgagtacgcgtcgccgtcagtgataaattca
ctggttgctcgttttccacacataccattcgttgccattttacattcaaatggcgaagta
gccgcgtcgtgcaatttagtcagcgtgatcaccttaccgcttacttacccagtacttacg
caatcaattcaccgatgccaagaatatagtcgcagaaagccgggtaaaacacgtgctggt
ggctctaaaacgcgtctttttagaagtttggttggtaagagcgacgaaattcagattgta
cgccgtttagtagagcaagtagctccaacagaggctacagtgctgattttgggcgaatct
ggtacaggtaaagaggtggtggcacgtaatgtacatttcttgtcagaacgtaaagacggc
ccttttattcctgttaactgcggtgctattcccggcgagctacttgaaagtgaattgttt
ggtcacgaaaaaggcgcgtttaccggtgcaataagtgctcgtaaaggccgttttgagtta
gccgaaggcggaacattatttctagatgaaattggcgacatgccgttgcagatgcaagtc
aaactgcttcgggtgctgcaagagcgtatttatgagcgagtaggcggcagtaagcctcta
caatgcaacgttcgtattattgcggctacccatcgtcatctagaaactatgatcaaagaa
gataagtttcgtgaagatctctattaccgcttaaatgtgttccctatcgatagccccgcg
ttacgtcagcgtaaagatgacattcccttgctattgcaagaactcaacagtcgtattcaa
ggtgatggtgtagatagcgtacgtttcactgagcgcgccattgcatcgttaatggagcat
aactgggcgggtaacgtacgagagctatcaaaccttgttgagcgtttaagtattctttat
cccggtcaaatcgttgatgtggccgaccttccagagaaataccagtacggtgagattcaa
gcgtacgaaccagattaccctgaagaattgttagagcgagatgcgtttaatgcgcttttt
gccgaatcagcctctcaagagcactttgacgagcctgaggaagagaacagtttgccgctt
tcctcgtcgttgcctgaggaaggggttaatctgaaagaatacttatctgaacttgaaatt
accctcattcgccaagcgttagaacaacaagaatgggttgtcgctcgcgctgccgataag
cttggaatgcgaagaaccacgcttgttgagaagatgcgtaagtacgacattcaacgcatg
gaagaagtttaa
DBGET
integrated database retrieval system
