Anopheles stephensi (Asian malaria mosquito): 118505285
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Entry
118505285 CDS
T08252
Name
(RefSeq) uncharacterized protein LOC118505285
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
118505285
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aste03021
]
118505285
03019 Messenger RNA biogenesis [BR:
aste03019
]
118505285
Transcription machinery [BR:
aste03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
118505285
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
118505285
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
Pcf11_helical
CFIA_Pcf11
zf_UBZ
VHS
M11L
Motif
Other DBs
NCBI-GeneID:
118505285
NCBI-ProteinID:
XP_035896759
LinkDB
All DBs
Position
2:complement(91598089..91610496)
Genome browser
AA seq
2073 aa
AA seq
DB search
MEQTPAAESRAKQIEKEYLSSLADLNVNSKPLINMLTILAEENLEYAQIIVNAVEKHLTK
VAPDVKLPILYLVDSIVKNVGKQYQTLFSQVIVNMFCGVFQTVNEKIREKMFSLRQTWNE
VFQQSKLYTLDVKINSIDPGWPITAQLKPKAASIHLNPMFLKGNEPTLAMQQKLRDKQRE
LLQLQARKLELELLTTKKRILEQEKQLSIQTESVAKEPSVELIKASDGIAGAPAMHPAAG
ASGGGSIAGIVPPPKSRIAPVPQGMINMVKTRDPRLAKQQATAAQHGGPSSMAAGGVNNH
SGLVGPLSIPPPVFAGGLMDSANHGFSGTKQSSLHAKERDVGGKPRDGARSDSLLEEGAV
RGKKLASSSVTSNSSSSAHKSRREHDAKSRKDRKEQHASSSSSSSSRSSAKGGKSSTRSS
SSTEKRKQRTHSASDGSPHGGGRKSPHTTTTSPGKKKSSSEKSSSSHHSQSDHSPKGKSR
SVESRSASEATVAGTSGGKSSQQARIHHLDSKKTGEHPAPAAASAVGSASDLDLRFGAGP
QKRIKIDELESGPDIRPSAEDTDDATIAAMMLAGQKASEVQNNSATDDEEALSAMIAKDI
DLRAIPLQLITPKHPSTEPDLSANVGSKVDRASLKDSPSNRSDEMEEDADGYANGKKRTS
TTNYEEPNAKKSKAEMLDALFGNEDVDLRQLPIGGTLLLSGDGRELDFAKMDNNAADQPR
SPLSERTNSIHGAKLGGDVRLEKSQEKDRLGRPLLYNKLPDDPIERRRSINSLAKPGDID
HRFQQQQQPHHTLVGHDLTEDDDNSMDSMNTNIKTIIAQAQEQMDKGEITPEQYNILMKQ
VIQLNETQKIRQAQRIESVKRQEPTIIGIDDTSLSGDNDVIVTGVSGPMVGAGASGMRMN
DPKDSVGGVVNDFRGKIHPIDGKPPLGKPFDVVAPFAGIGIPPTSVPPPDIRAQRDPRRV
RESKWNRVEPVPPGPAWANRPGAVGPIVGGSMAVPPMAGGGIRPGMVVPSPWEQAPFQVM
TDGMPRFPTPPGPLPLGVLVGGAGVPANGMSMMNPALSKMNDSVRTINIDGIQREIRFYE
EIAVIFINWDEPKEIGFQKGARMVVVDDRETFELGFNEPYKSVSIENKVYQMRLGAPTRE
LYIDDSWYECYFGDKPSTIVLDGKPRVFKIAGPAPQVKIGDCRKDLVAGKINMIVDAKYM
IPVFLDCKPQMFEVYGVMHRLQFADFLLTVLIDEQPFPVDYGGLPMLVRSRERDYYIRFT
ALPNGVVPGRVYIRDMIRTPMYRDLRTPPKDPGALSPPIPLNPPFGPPTTVPPALATSGP
PGMGFGPMNNLPPGMGPHHPGVAPPNSTSTGLDYLTNLMPSMAMQTGAAGKNGPGYRIEA
DDKAAAAKQHQSASSSASGGLPLLANINVEELYKKIVAAGIITKLGGGSSSSPTPPHSAG
DGGGAPAADSKDSKDPANKSKEKDKAPIPEIDPVLLNKPDTLKKRQTAVVHQLFSGMQCS
SCGVRFPPEQTMKYSQHLDWHFRQNRRDRDSARKAHSRKWYYDVSDWIQYEEIEDLEERE
KNWFETQQTDQGDLKKGGVGGGGGIGSSALDGDEFATNDDSPQPSCPAGSDEDDRQCHMC
HDTFEHFYNEETEEWHLKNAIRVEGSTYHPLCYEDYKASLTMSESTLGNGTLGASLDESQ
KTEGGEMDTSEAGASDVAGKGDECEGTSSSSTKGIAMEDDDDDDDVIVLPAVEPVVEEIL
DDDGDEQPSGERGGGDSGDADGGAEGDEESSGAAANIKSPRQPEFQERQIDEDLFIQEPN
IEVTDLDEIEDKPDDGASGEAGTADGESQLSSLLRVKIKQEPKEEDDADEEDALFEDVGT
IESSLVEVENPSPATNTNAADEELYDDVIPDESIPSPSESSNQMGVAGQPKATIDGNVEL
QDATQSAVVVPNKIKINITKTKQSNSGHTNHGATAPNDGEPTSDGNNGVNVNNFNEDTQD
DQQEHGANAREDDGAGSWEERHEKNGSEQSNNKESSAVTTTTTTTAADDAAVVAFEETTD
VAYELKESLKEIELNRQPRVTSGLEASGLCSIM
NT seq
6222 nt
NT seq
+upstream
nt +downstream
nt
atggagcagacgccggccgccgagagccgggcgaagcagatcgagaaagagtatctctcc
agtctagccgacctgaatgtcaacagcaaaccgttgataaacatgttgacaatactggcc
gaggaaaacctcgagtacgcccagatcatcgtgaacgcggtggaaaagcacctgacaaag
gttgcacctgatgtaaaactgccaatactttacctcgttgattccatcgttaagaatgtg
ggcaagcagtatcagacgctcttcagtcaggtcatagtaaatatgttttgcggcgtgttt
caaacggtcaacgagaagatacgggaaaaaatgttcagcttgcggcaaacgtggaacgag
gtgtttcaacagtcgaagctgtacacgctggatgtaaaaatcaattcgatagacccggga
tggcccatcacggcacagctaaaaccgaaggcagcatccatccacttgaatccgatgttc
ctgaagggcaatgaacccacgctagcgatgcagcaaaagctgagagataaacagcgggag
ctgctgcagttgcaagcgcgaaagctcgagctagagttgcttacgacgaagaaacgcatt
ctagagcaggaaaaacagttaagcattcaaacggagagtgttgcaaaggagccttcggta
gagttgataaaagcgtccgacggtattgctggtgctccggcaatgcacccggcagctggt
gcttcaggaggaggttctatcgcaggcatcgttccaccaccgaaatcccgtatcgctccc
gttccccaaggcatgatcaatatggtgaagacgcgcgatcctcgcctggcaaagcaacaa
gcaacagcagcccagcacggtggtccgtcatcaatggcggctggtggtgtgaataaccac
tccggactggtaggccctttatcaattccaccgcccgtgtttgctggtggtttgatggac
tccgccaatcacggcttctctggtacgaaacaatcgtccctacatgcgaaggagcgggat
gttggtgggaaaccccgcgatggcgcccgatccgactcgctgcttgaagaaggagctgtc
cgtggcaaaaaactcgcatcatcttcggtcaccagcaacagcagctcatctgcgcacaaa
tcgcgtcgcgagcacgatgcgaagtcacgaaaagatcgcaaggagcagcacgcttcatcg
tcttcgtcttcgagcagcagatcgtcggcgaagggtggcaaatcgtccacacgatcgagc
agcagtaccgagaaacggaagcagcgcacgcatagcgccagcgatgggtcaccacatggt
ggtggtcgaaaatcaccgcacaccactaccacatcaccgggaaagaagaaatcctcgtcg
gaaaaatcttcatcctcgcaccattcgcaaagcgaccacagtccaaagggaaaatcacga
tcggtggaaagccggtccgcttctgaggcaacggtagccggcacctcgggaggcaaatca
tctcaacaagcacgaatccaccatctcgatagtaaaaagactggcgagcatccagcacca
gcagcagcatcagcagtcgggagcgcctccgaccttgatttgcgcttcggcgccggtcct
caaaaacggatcaaaatcgatgagctcgagtctggaccggacattcgtcccagtgcggaa
gatacagacgacgcgacgattgcggccatgatgctggcggggcaaaaggcttcggaagta
caaaataatagcgccacagacgacgaagaagctctttcggctatgattgctaaagatatc
gatttacgagcaattcctctgcagctgatcacgccgaaacatccgtcgacggagccggat
ttgtcggcgaatgtaggctcaaaggttgatagggcatcgttgaaggactcgccatcgaac
cgatcggatgagatggaggaggacgcggatggatacgccaatggaaagaagcgaaccagc
accaccaattacgaggagccgaacgcgaaaaagagcaaagcggaaatgttggatgcgttg
tttggtaacgaggatgttgatcttcggcaattaccaattggtggcacgctgctgctctca
ggagatggacgagagttggattttgcgaagatggataacaacgctgcggaccagccgaga
tctccgctttcggagcgaaccaacagcattcacggagcaaagctgggaggagacgtgagg
ttggagaaaagtcaggaaaaggatagactcggtcgacctctgctgtacaataaattgcca
gatgatccgatcgaacgccgacgatcgatcaattcgctagccaaaccgggcgatatcgat
catcggtttcagcagcagcagcagccgcatcacacacttgtgggccacgatcttaccgag
gacgacgacaattcgatggacagtatgaacacgaacatcaaaaccatcatcgcgcaggca
caggagcaaatggacaagggagaaattacgcccgaacagtacaacattctcatgaagcag
gtgattcagctgaatgagacccaaaagatccgccaggcacaacgcatcgagtccgtgaag
cgtcaggaaccgacgattatcggaatcgatgatacgtcccttagcggtgacaacgatgta
attgtgacgggcgtctcgggaccaatggtgggagctggcgcgtcgggaatgcgtatgaac
gacccgaaggatagcgttggtggtgttgtaaatgatttccgcggcaaaatacatcccatc
gatgggaaaccgccgctcggcaaaccgttcgatgttgttgctccattcgctggcattggc
attccaccgacgtccgtgccgcctcccgatatccgtgcccagcgagatccacgaagagtc
cgcgaatcgaaatggaaccgggtcgagcctgttccgccgggcccagcctgggcgaatcgt
cccggtgccgttggaccgatcgttggtggatcgatggcggtacctccgatggcaggtggt
ggcattcgtcccggcatggtggtgccgagcccttgggagcaggcaccattccaggtgatg
accgacggcatgccccgattcccgacacctcccggtccgttaccgctgggcgtactggta
ggcggggctggagtacccgccaacggtatgtcgatgatgaatccggcactgtccaagatg
aatgatagtgtgcgtacgataaacatcgacggcatccagcgcgagatacgcttctacgaa
gagattgccgtcatcttcatcaactgggacgagccgaaggagatcggatttcagaagggc
gctcgtatggtggtggtggacgaccgggaaacgttcgagctggggttcaacgaaccgtac
aaatcggttagcattgagaataaagtgtatcagatgcgtttaggcgctcccacgcgggag
ctgtacatcgacgattcctggtacgagtgctacttcggcgacaagccctcgaccatcgtg
ttggacggcaagccgagagtgttcaagatcgctggcccggcgccgcaggtaaaaattggc
gactgtcgcaaggatcttgtggcgggtaagatcaacatgatcgtcgatgcgaaatacatg
ataccggtgtttctggactgcaagccgcaaatgtttgaagtgtacggtgtcatgcatcgg
ctgcagtttgcggactttctgctgaccgtgctgatcgacgagcaaccgttcccggtggat
tacggtggtttgccgatgctggtgagatcacgcgagcgagactactacatacggttcacc
gccctgccgaacggtgtggtgccgggtcgggtttacattcgcgacatgatccgcacgccc
atgtaccgtgatctgcgcaccccaccgaaagatcctggcgccttgtcaccaccgataccg
ctcaatccaccctttggtcctccgacaacggtccctccagcgctggccacctccgggccg
ccaggcatgggcttcggaccaatgaacaatcttccgccgggtatgggtccgcaccatccg
ggcgttgcgcctcccaactccacgtctaccgggcttgattatctcacgaacctaatgccc
tcgatggcgatgcaaaccggtgcagctggtaagaatggccctggctaccgaatagaggcg
gacgataaggcagctgcagcgaagcagcaccagtcggccagttcgtctgccagcggagga
ttaccgcttctcgcgaacattaatgtcgaggagttgtacaaaaagattgtggcggccggc
atcataacaaagctgggcggtggcagctcctcttcaccgactcctccccattctgctggc
gatggcggtggagctcccgccgctgactcgaaggactcgaaggatccggccaacaagtcc
aaagaaaaggataaagcacccattccagaaatcgaccctgtgttgctgaacaaaccggac
acgctgaagaaacgccaaacggcggtcgtgcatcaactgttctctggcatgcagtgcagc
agctgcggtgtgcggttcccacccgagcagacaatgaagtacagtcagcatcttgattgg
catttccggcagaaccgacgtgaccgggactcggcacggaaggcacattcgcgcaagtgg
tactacgacgtgtcggactggatccagtacgaagagatcgaagacttggaggaacgggag
aagaattggttcgaaacgcagcagactgatcagggtgacctgaagaagggtggcgttgga
ggtggtggaggaatcggcagcagcgctctggacggggacgagtttgcgacgaacgatgat
tcaccgcagccgagctgtccggccggttccgacgaagacgatcggcagtgtcacatgtgt
cacgatacgttcgagcacttctacaacgaggaaacggaggagtggcatctgaagaatgcg
atccgggtcgaaggtagcacgtaccatccgctgtgctacgaagactacaaggcatcgttg
acgatgtccgaatcgacgctcggcaatgggacgctcggtgcgtcgttggacgagagccag
aagactgagggcggggagatggacacgagcgaggcgggagcctccgacgtagcgggtaaa
ggtgatgagtgtgagggaacatcgtcgtctagcacaaaaggtattgcaatggaggatgac
gacgatgacgatgatgtgatagtgctgccggctgtggaacccgtcgttgaagaaatcctc
gacgatgacggtgatgaacagccgagtggtgagagaggaggaggcgacagtggtgacgcg
gatggtggggcagaaggcgacgaagaatcatcgggagccgcagcgaacattaaatcgccc
cgtcagcccgagttccaggagcgtcagatcgatgaggatctcttcatacaggaacccaac
atcgaggtgacggatttggatgagatcgaggacaagccggacgatggtgcgtccggtgag
gctggaacggcagatggcgaaagccagctatcttccttgctgcgtgtgaagataaagcag
gaaccgaaggaggaagacgatgcggacgaggaggatgcgttgttcgaggacgtcggcacg
atagaatccagcctggtagaggtagagaatccttccccggccaccaacaccaacgcggca
gatgaggaactgtacgacgacgttattcctgacgaaagcattccatcaccatcagaatcg
tccaaccagatgggcgttgcggggcaaccgaaggcaacgattgacggcaatgtggaactg
caggatgccacacagtcggccgtggtcgtgccgaacaaaatcaagatcaacatcacgaag
acgaagcagtcaaacagtggccatactaatcacggtgcgacggcgcccaacgatggggaa
ccaactagcgatgggaacaatggtgtgaatgtgaacaattttaacgaagatacgcaggac
gaccagcaggagcacggtgctaacgcgcgcgaagacgatggtgccggaagttgggaggaa
aggcacgaaaagaacggttccgaacagtccaataataaagaatcgtcggcggtgacgacg
acgacgacgacgactgcagcggatgatgctgcagtggttgcgttcgaagaaacaactgat
gttgcgtatgagctgaaggagagcttgaaggagatagagcttaaccgacagccacgggtg
accagtggccttgaagcatccggactctgttcgatcatgtaa
DBGET
integrated database retrieval system
