Anopheles stephensi (Asian malaria mosquito): 118509242
Help
Entry
118509242 CDS
T08252
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
aste
Anopheles stephensi (Asian malaria mosquito)
Pathway
aste03013
Nucleocytoplasmic transport
aste03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aste00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118509242
03015 mRNA surveillance pathway
118509242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aste03019
]
118509242
Messenger RNA biogenesis [BR:
aste03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
118509242
mRNA cycle factors
P-body specific factors
118509242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
118509242
NCBI-ProteinID:
XP_035905449
LinkDB
All DBs
Position
3:13039110..13041803
Genome browser
AA seq
667 aa
AA seq
DB search
MDKPKSTATRATVSGGGGRDKPDKRKDKKDKGGGGGGKSGGSNKRNKRNKKDAALPMTRV
VIRRLPPTMTEAVFCEQISTDGKMPNHDEFYFVGPDWTLGHNASCRAYINFTNPEDIFRF
TDSYDGYTFVDSKGMEHQAVVEYAPFQKLPKTRSRKKDPKCNTIETDTHFLAFKEALEAE
EQEALHGRGTQEFSFKIEHEEKTTTTPLLEFIAQRKQEKRDEKRRKQEEKRRMRDEERHM
RKTQIARSIPDAICEEVVSEIMERAVLPRLNPAQNASKPMGTFSGKGGGGGAAGGADGGK
FKDDKDKKSKNKKEKERNRDKKGEDTKAPPESGKPDGGDKNAGSRKQDRDKGGKKGKEKQ
GKDEPRFREQNQQQQQQQKGERNESKLKKDKPPAEGHPSGGNSEPHPSTSKAANPSTGAS
SNDGTTTKKEVKKYSERRKETRARAETRLAEQDTRNEPDSNAKDTGPPATSKPVEVKKSI
LTANVPPFIPKEKTTILLAGHASTATNIPVEHLLTEKMAKVTIEKRPQTGSQTDNGKKSP
SPDGAAPGPKTKLSEKQRELREARKIRNKDRPSIEIYQPRKRIVSGGGTGKSEDDRGRSD
SDRPSDNVSASASAGAAVENDAKERRHKLTKKASDRPQRERKNGRKNSIEVDSGGKETVA
GGSVQQG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggataagcccaagtccaccgccacacgcgccaccgtatccggcggtggaggtcgcgac
aaaccggacaaacgcaaggacaagaaggataagggcggcggcggcggcggcaaatcgggc
ggttcgaataagcgcaacaaaaggaacaagaaggatgctgcactgcccatgacccgggtc
gttatccgccggctgccaccgacaatgacggaggcggtgttttgcgagcaaatttcgacg
gacggcaagatgccgaaccacgacgagttttactttgtggggcccgattggaccctggga
cacaatgcatcctgccgggcgtacataaactttaccaatccggaagatatcttccggttt
accgatagctacgatgggtacacgttcgtcgacagcaagggcatggagcatcaggccgtg
gtggagtatgcgccgtttcagaagctaccgaaaacgcgatctcgcaagaaggatcccaaa
tgtaatacgatcgaaaccgatacccacttcctggcgtttaaggaagcactggaagcggaa
gagcaggaagcgctgcacgggcggggaacgcaggagttcagctttaagatagagcatgag
gagaaaaccacgaccacaccattgctggaattcatcgcacaacggaagcaagagaaacgc
gacgaaaagcgtcgcaagcaggaggaaaaacgtcgtatgcgggacgaggaacggcacatg
cgaaagacgcagatagccaggtcaataccggacgcgatctgcgaagaggtggtgagcgaa
attatggaacgagccgtgctgccacgcttaaatccggcccaaaatgcatccaaaccgatg
ggtaccttttccggcaaaggtggtggtggtggtgctgcaggtggagcagatggaggaaaa
tttaaggacgataaggataaaaagtcgaagaataagaaggagaaggagcgaaatcgcgac
aagaagggagaggatacgaaagcgcccccggaaagcggaaaaccggacggaggcgataaa
aatgccggcagcaggaagcaagatcgcgacaagggtggcaaaaaggggaaggagaagcag
ggtaaggatgagccccgtttccgagagcaaaaccaacagcagcagcagcaacagaaagga
gagcggaatgaatcgaagttgaagaaggataaaccaccggcagaaggtcacccgtccggt
ggcaacagtgagccgcacccatccacgtccaaagccgccaacccatcgacgggcgcgtcg
tcaaacgatgggacgaccaccaagaaggaggttaagaagtacagtgagcggcgcaaagaa
acgcgtgcccgggcggaaacacgactcgccgagcaggacacccggaacgagcccgattcg
aacgccaaggacaccggtccgcccgccaccagtaagccggtggaggtgaagaaaagcata
ctcaccgccaatgtaccaccgttcataccgaaagagaagacgaccatcctgctggctggg
cacgcgtcgacggcaacgaacattcccgtcgagcaccttctgactgaaaagatggccaag
gttaccatcgaaaagcggcctcagactggctcgcagacggacaatggcaaaaagtcccct
tcgccggacggtgcggcaccgggaccgaagacaaaactgtccgaaaagcagcgtgaactg
cgtgaagcgcgcaaaatccgtaacaaggatcgtccctcgatcgagatctaccagccccgc
aagcggatcgtgtctggcggtggtacgggcaaaagtgaggacgatcgtggccggagcgat
tccgaccgtccgtccgacaacgtgtccgcttcggcttcggctggagccgcggtggagaat
gacgcgaaagagcggcgccataagctcacgaagaaagcgtccgatcggccgcagcgtgaa
cgtaagaatggaagaaagaactcgatcgaggtggacagtggtggcaaggaaacggtggct
ggcggcagtgtgcagcagggttga
DBGET
integrated database retrieval system
