Actinobacillus succinogenes: Asuc_1089
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Entry
Asuc_1089 CDS
T00558
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
asu
Actinobacillus succinogenes
Pathway
asu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
asu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Asuc_1089
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asu03400
]
Asuc_1089
DNA repair and recombination proteins [BR:
asu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Asuc_1089
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Asuc_1089
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
UB2H
UvrD-helicase
AAA_30
AAA_22
DUF87
Motif
Other DBs
NCBI-ProteinID:
ABR74455
UniProt:
A6VNA8
LinkDB
All DBs
Position
complement(1204406..1206484)
Genome browser
AA seq
692 aa
AA seq
DB search
MIKYTYFIRDQYPKMAHKINTKPFILHSDFKPSGDQPSAIAKLVENLNDGLAHQTLLGVT
GSGKTFTIANVIAQLNRPAMLLAPNKTLAAQLYAEMKTFFPENAVEYFVSYYDYYQPEAY
VPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDPDSYLKMMLHL
QTGAIIDQRQILARLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDQAVRIELFDNEI
ERLSLFDPLTGTGFGRIPRFTVYPKTHYVTPREQILDAIEKIKTELAKRREYFIKENKLL
EEQRITQRTLFDIEMMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYVPADGLLIIDESH
VTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIYVSATPGPYEL
EKSGSEIIDQVVRPTGLLDPEIEIRPVAIQVDDLLSESRQRAEKNERILVTTLTKRMAED
LTDYLEEHGVRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLDIPEVSLVAIL
DADKEGFLRSERSLIQTIGRAARNLKGKAILYADRITQSMDKAITETNRRREKQMKYNEE
HGIIPQGLNKKVGELLDIGQNSNRNKGKSRNKIENSSAHYKLPKTPKELQKQIKKLEQQM
YKFAQDLEFEKAAAMRDQLHQLRQEFMLDKLE
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgataaaatacacctactttataagagatcagtatcctaaaatggcacataaaattaat
acgaaaccttttattcttcattccgattttaagccttccggcgatcaaccttcagctata
gcaaaactcgtggaaaatcttaacgacggtttggcacatcaaaccttgctcggcgtaaca
ggctcgggaaaaaccttcaccattgcaaatgtcattgcgcaattaaaccgtccggcaatg
ttactggcgcccaataaaacactggccgcccagctttatgcggaaatgaaaacatttttt
ccggaaaacgcagtggaatactttgtatcctattacgattactatcaacctgaagcctat
gtacccagtagcgacaccttcatcgagaaagatgcctctataaatgatcaaatagaacaa
atgcggctttccgctaccaaatctttcttggaacgccgtgacactatcgtagtcgcttct
gtttccgctatttacggcttaggagatccggacagttatctgaaaatgatgctacattta
caaacaggcgccattatcgatcaacgtcagattttagcccgtttggcagaattacaatat
acgcgtaacgatcaggctttccaacggggtacatttcgggtacgtggtgaaattatcgat
atttttccggcggaaagtgatgaccaggcggttcgtatagaactttttgataatgaaata
gaacgcttaagtctatttgatccgctcaccggtaccggttttggacgtattccgcgattt
acggtttatccgaaaacccactatgtgacaccacgcgaacaaattctggatgccatagaa
aaaattaaaacggaattagctaaacgtcgcgaatatttcatcaaagaaaataaattattg
gaagaacaacgaatcactcaacgaacattatttgatatcgaaatgatgaacgaattagga
tattgttccggtatcgaaaactactctcgctatttatccggtcgcaatgaaggcgaaccg
cctccgactttattcgattatgttccggcggacggtttattaattattgacgaaagccat
gttaccgtaccgcaaataggaggaatgtaccgaggcgatcgttcccgtaaagaaactttg
gttgaatacggttttcgtttgccttccgcattagataaccgtccattgcgttttgaagaa
ttcgaacgattagcaccgcaaactatttatgtttcggctacgcctgggccttatgaattg
gaaaaatccggttcggagattatcgatcaggttgtccgtcctaccggcttattggatcct
gaaattgaaattcgtccggtagctattcaagtggatgatttactttccgaatcgcggcaa
agagcggagaaaaacgaacggattttagtcactacgcttaccaagcgtatggctgaagat
ttaacggattatttggaagaacacggtgtacgggtacgttatttacattcggatatagat
accgtagaacgggtggaaataatccgggatctccgtttaggtgaatttgacgttttagtg
gggattaacttattgcgggaaggtttggatattccggaagtttcactggtagcgatttta
gacgccgataaggaaggtttcctgcgttccgaacgttcgctcattcaaaccatcggacga
gcggctcgtaatctgaagggaaaagcgattctgtatgcggatcgcattactcagtccatg
gataaagccattacagaaaccaaccgacgccgtgaaaaacaaatgaaatacaacgaagaa
cacggcattattccgcaggggttaaacaaaaaagtaggagaattattggatatcggccaa
aattccaatagaaacaaaggaaaaagccgtaataaaattgagaattcttccgcacattat
aaattacctaaaacccctaaagaattacaaaaacaaattaaaaaactcgaacaacaaatg
tataaattcgctcaagatttggaatttgaaaaagccgccgctatgcgcgatcaactacat
cagctacggcaggaattcatgttggataaacttgagtaa
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