Atlantibacter subterranea: NLZ15_03775
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Entry
NLZ15_03775 CDS
T08300
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
asub
Atlantibacter subterranea
Pathway
asub03410
Base excision repair
asub03430
Mismatch repair
asub03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
asub00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NLZ15_03775 (recJ)
03430 Mismatch repair
NLZ15_03775 (recJ)
03440 Homologous recombination
NLZ15_03775 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asub03400
]
NLZ15_03775 (recJ)
DNA repair and recombination proteins [BR:
asub03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NLZ15_03775 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NLZ15_03775 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NLZ15_03775 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
RecJ_OB
DHH
Motif
Other DBs
NCBI-ProteinID:
UTJ48196
LinkDB
All DBs
Position
787171..788904
Genome browser
AA seq
577 aa
AA seq
DB search
MTQQSQLRRRTVDETAVLPPMLSPLLKRLYASRGVRGAQDLERSVKGMLPWQQLTGINAA
VEMLYQAFKTGQRIVVVGDFDADGATSTALSVLALRSLGGKEIGYLVPNRFEDGYGLSPE
VVDQAKALGAELIMTVDNGISSHAGVEHAHRYGIPVLVTDHHLPGATLPAAESIINPNLA
DCEFPSKSLAGVGVAFYLMLALRSHLRDKGWFDEQGIAIPNLAEYLDLVALGTVADVVPL
DANNRILTWQGLSRIRAGKCRPGIRALLEIANRDPQKLAASDLGFALGPRLNAAGRLDDM
SVGVALLLCDNPGEARVLANELDALNQTRKEIEQGMQAEALALCDACLKSADELPVGLAI
YHPEWHQGVVGILASRIKERFHRPVIAFAPAGDGTLKGSGRSIPGLHLRDALERLDTLNP
GLILKFGGHAMAAGLSLEASKIEAFQQRFAELVEQWLDPALLEGEVWSDGPLQPQEMTLE
IAEMLRDAGPWGQAFPEPAFDGRFRLLQQRLVGERHLKVMLEPAQGGPLLDGIAFNVDTA
RWPDAGVREVEIVYKLDINEFRGNRSLQLIIDHLWPL
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaacaatcgcaactccgtcggcgaacggtggatgaaaccgccgtgctgccgccg
atgctttcgccgctgctaaaacggctgtatgccagccggggcgtgcgcggcgcgcaagat
cttgagcgcagcgtaaaaggcatgctgccctggcagcagctaaccggcatcaacgccgcc
gttgaaatgctgtatcaggcgtttaaaaccgggcagcgcattgtggtggtgggtgatttt
gacgccgacggcgcaaccagcaccgcgctcagcgtgctggcgctgcgcagcctcggcggg
aaagagatcggttatctggtgccaaaccgttttgaagacggctacggcttaagcccggaa
gtggtggatcaggccaaagcgctgggcgctgagctgatcatgacggtggacaacggcatc
tcttcccatgcaggggtcgagcacgcgcaccgctacggtattccggtgctggtgaccgat
caccacctgccgggggcgacgctaccggccgccgaatccatcatcaatcccaacctggcg
gactgtgaatttccgtcgaaatcgctggcgggcgttggcgtggcgttttacctgatgctg
gcgctgcgcagccacctgcgcgacaaaggctggtttgacgagcagggtatcgccattccc
aatctggcggaatatctcgatttagtggccttaggcaccgtggcggacgtggtgccgctc
gacgccaataaccgcattttgacctggcaagggctgagccgcatccgcgccgggaaatgc
cgaccgggcatccgcgcgctgctggaaatcgccaaccgcgatccgcaaaagctggcagca
agcgatctgggattcgctctcgggccgcgtttgaacgctgccgggcggctggacgatatg
tcggtgggtgtggcgttgctgctgtgcgataaccccggcgaggcccgcgtgctggcgaat
gaactggacgcgttaaaccagacgcgtaaagagatcgagcagggcatgcaggcagaagcg
ctggcgctgtgcgacgcctgcctgaaaagcgctgacgaactgccggtcgggctggcgatt
tatcatcccgagtggcaccagggcgtagtgggtattctggcctcgcgcatcaaagagcgg
ttccatcgcccggtcatcgcctttgcacctgcgggcgacggcacgcttaaaggctcaggc
cgttcgattccggggctgcatctgcgcgatgcgctggagcgcctcgatacattgaatccg
ggactgatacttaaattcggcggccacgccatggcggcgggcctgtcgctggaagcctca
aaaatcgaggctttccagcagcgtttcgctgaactggtagagcaatggctcgacccggcg
ttactggagggggaagtgtggtccgacggtccgctacagccccaggagatgacgctggag
atcgcagagatgctgcgtgatgccggaccgtggggccaggcgttcccggaaccggcgttt
gacgggcgttttcgcctgttgcagcagcggctggtgggcgagcggcacctcaaagtcatg
ctggaaccggcgcagggcggtccgctgttagacggcatcgcctttaacgttgataccgcc
cgctggcccgacgcaggcgtgcgtgaggtggaaatcgtttacaagctggatatcaacgag
tttcgcggcaatcgcagcctgcagctaataatcgaccatctctggccgctttaa
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