Arthrobacter sunyaminii: KG104_00265
Help
Entry
KG104_00265 CDS
T08124
Name
(GenBank) ATP-dependent DNA ligase
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
asun
Arthrobacter sunyaminii
Pathway
asun03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
asun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
KG104_00265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
asun03400
]
KG104_00265
Enzymes [BR:
asun01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
KG104_00265
DNA repair and recombination proteins [BR:
asun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
KG104_00265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigD_Prim-Pol
DNA_ligase_A_M
LigD_N
DNA_ligase_A_C
RNA_ligase
DNA_ligase_OB_2
DNA_primase_S
Motif
Other DBs
NCBI-ProteinID:
QWQ36324
UniProt:
A0A975PFR7
LinkDB
All DBs
Position
49814..52489
Genome browser
AA seq
891 aa
AA seq
DB search
MASSGAGLKQQETVNVDGHRLRLTNLDKVLYPETGTTKADVLSYYAAVAEALLPHSRDRP
ATRKRWVHGVGVPGDPGQVFFQKNIETSAPTWVKRFPIEHKSGTNIYPLVNDLATLTWLA
QSAALEIHVPQWRFGPRGKINNPDRLVLDLDPGEGVDLAQCAEVARLARDILSDMGLDAR
PVTSGSKGIHLYAALDGMQTSDEVSAVAHELARALEADHPDLIVSDMKKSLRTGKVLLDW
SQNNGNKTTICPYSLRGRFTPTVAAPRTWEELEDPDLAQLDYEQVMQRLAEDGDPLTGMD
SGSGELDAEALEDAGSEGTGAGPADRLSKYRSMRDAAKTPEPVPAEPAEPSEGNSFVIQE
HHARRLHWDFRLEHDGVLVSWALPKGPPDSPDQNHLAVQTEDHPLDYGSFAGTIPKGEYG
AGEVRIWDHGTYEPEKWRDGKEVIAVLHGQPDGGLASEGSADRRFALIHTGGKGGANNWL
IHLMKHQPEPRDPADTPDIPDTPDEADKANKADNADKGDPKARDADEAEDSPVETVAAAA
AAPPPGAKTLPDTAGTAKAVAADAGEHGMPAVEPMLATLGTRADVNEDDEWAFEMKWDGV
RAVVDVTPEGTRLISRNGNDMTAAYPELQELGRHLNGERAVLDGEIVAINKSGRPDFGLL
QPRMHLTKRRDIEAAAARTPVHLMIFDLLWLDGNSLMELPYSQRREILESAVEPAGEDGH
VQVPPALEMSMDEAVEASRELGLEGVMAKRRTSTYSPGRRSKSWIKLKNSFTQEVVIVGW
RPGKGNRASKIGSLLVAVPDGHELTYIGRVGSGLSEKDLALVGGKLKKLARKTPPLEGVP
HADASDAQWVRPVLVGEVTYSERTATGKLRHPAWRGLRPDKKPSDVVVEIP
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcagcggagcgggtctgaagcagcaggaaactgtgaacgtggacggccaccgc
ctccggctgaccaatttggacaaggtgttgtatccggaaaccggaaccaccaaggccgac
gtgctgtcctattacgccgccgtcgccgaggcgctgctgccgcattcccgggaccgtccg
gccacccgcaagcgctgggtccacggagtgggagtgcccggagatccggggcaggtcttc
tttcagaaaaacattgagacctcagctcccacgtgggtgaagaggtttccgattgaacac
aaaagcggcaccaacatttatccgctggtcaacgacctggcgacattgacctggctggcc
caaagcgcggccctggaaatccatgtgccgcagtggcggtttggcccgcgcggcaagatc
aataatccggaccgcctggtgctggatctggatccgggggagggcgtggacctggcgcag
tgtgccgaggtggcccgcctggcccgggacatcctctccgacatgggactggacgcccgc
ccggtcaccagcggttccaagggcatccatctgtatgccgcactggacgggatgcagacc
tcggacgaggtgagcgccgtcgcacacgaactcgcgcgggcactggaagcggaccatccg
gacctgatcgtgtccgacatgaaaaagtccctgcggaccggcaaggtcctgctggactgg
agccagaacaacggcaacaaaaccaccatctgcccctattcgctgcgcggccggttcacg
cccacggtggcggcgccgcgcacctgggaagagctcgaggatccggacctcgcccagctg
gactacgaacaggtgatgcagcggctggccgaggacggggatccgctaaccggcatggac
tccggctccggggaactggacgccgaggcactggaggacgccggctcggaaggaaccggc
gcgggacctgcggaccggctcagtaagtaccgcagcatgcgcgacgccgctaaaaccccg
gaacctgttccggccgaacccgcggagccctccgaaggcaacagctttgtcatccaggag
caccacgcccggcggctgcactgggacttccggctggaacatgacggcgtcctggtctcc
tgggcgctgcccaagggaccgccggattccccggaccagaaccatctggcagtccagact
gaggatcatccgctggactacggcagctttgcggggaccatccccaagggggagtacggc
gccggcgaggtgcggatctgggaccacggaacctatgaaccggaaaaatggcgtgacggc
aaggaggtcattgccgtgctgcacggccagcccgacggcggccttgcctccgaaggcagc
gcggaccgccgcttcgccctgatccacaccggaggcaagggcggggccaacaactggctg
atccatctcatgaagcaccagcctgagccgcgggatccggcggacactcccgacattccc
gatactcccgatgaggcggacaaagccaacaaagcggacaacgcggacaagggtgatccg
aaggccagggatgccgacgaggcggaagattcgcccgtcgaaaccgtggcagccgccgcc
gcagcgccgcctccaggggccaaaacccttccggacaccgccgggacagccaaggccgtt
gcggcggacgccggggaacacggcatgcccgccgtggaacctatgctggccaccctcgga
acccgcgcggacgtcaacgaagacgacgaatgggcctttgaaatgaagtgggacggcgtc
cgagcggtggtggatgtgacgccggagggaacccggctgatcagccgcaacggcaatgac
atgaccgccgcctatcccgaactgcaggaactggggcggcatctgaacggggaacgcgcg
gtcctggacggggaaatcgtggccatcaacaagtcgggccggccggacttcgggctgctc
cagccgcgcatgcacctgaccaagcgccgcgacatagaggccgccgccgcccgcaccccg
gttcacctgatgatctttgacctgttgtggctggacggaaactcgctgatggagctgccg
tactcgcagcggcgggagatcctggaatccgcagtggaaccggcgggggaggacggccac
gttcaggtgccgccggcgctggagatgtccatggatgaggccgtggaggcgagcagggag
ctcggccttgaaggagtcatggccaagcggcgaaccagcacctattcccccggccggcgg
tccaagagctggatcaaactcaagaattccttcacccaggaagtggtgattgtgggctgg
cgcccgggcaagggcaaccgggcatccaaaatcggttcgctgctggtggccgttccggac
ggtcatgagctgacctacattggccgggttggatcgggcctgagcgagaaagatctggcc
ctggtgggcgggaaactgaaaaaactggcccgcaagacacccccgttggagggagttccc
cacgcggacgcctccgacgcccaatgggtccgtcccgtcctggtgggtgaagtgacctat
tccgaacgcaccgccaccggcaagctccgccaccccgcctggcgcggactgcgcccggac
aagaaaccctccgacgtcgtcgtcgaaatcccctga
DBGET
integrated database retrieval system