KEGG   Arthrobacter sunyaminii: KG104_00265
Entry
KG104_00265       CDS       T08124                                 
Name
(GenBank) ATP-dependent DNA ligase
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
asun  Arthrobacter sunyaminii
Pathway
asun03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:asun00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    KG104_00265
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:asun03400]
    KG104_00265
Enzymes [BR:asun01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     KG104_00265
DNA repair and recombination proteins [BR:asun03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     KG104_00265
SSDB
Motif
Pfam: LigD_Prim-Pol DNA_ligase_A_M LigD_N DNA_ligase_A_C RNA_ligase DNA_ligase_OB_2 DNA_primase_S
Other DBs
NCBI-ProteinID: QWQ36324
UniProt: A0A975PFR7
LinkDB
Position
49814..52489
AA seq 891 aa
MASSGAGLKQQETVNVDGHRLRLTNLDKVLYPETGTTKADVLSYYAAVAEALLPHSRDRP
ATRKRWVHGVGVPGDPGQVFFQKNIETSAPTWVKRFPIEHKSGTNIYPLVNDLATLTWLA
QSAALEIHVPQWRFGPRGKINNPDRLVLDLDPGEGVDLAQCAEVARLARDILSDMGLDAR
PVTSGSKGIHLYAALDGMQTSDEVSAVAHELARALEADHPDLIVSDMKKSLRTGKVLLDW
SQNNGNKTTICPYSLRGRFTPTVAAPRTWEELEDPDLAQLDYEQVMQRLAEDGDPLTGMD
SGSGELDAEALEDAGSEGTGAGPADRLSKYRSMRDAAKTPEPVPAEPAEPSEGNSFVIQE
HHARRLHWDFRLEHDGVLVSWALPKGPPDSPDQNHLAVQTEDHPLDYGSFAGTIPKGEYG
AGEVRIWDHGTYEPEKWRDGKEVIAVLHGQPDGGLASEGSADRRFALIHTGGKGGANNWL
IHLMKHQPEPRDPADTPDIPDTPDEADKANKADNADKGDPKARDADEAEDSPVETVAAAA
AAPPPGAKTLPDTAGTAKAVAADAGEHGMPAVEPMLATLGTRADVNEDDEWAFEMKWDGV
RAVVDVTPEGTRLISRNGNDMTAAYPELQELGRHLNGERAVLDGEIVAINKSGRPDFGLL
QPRMHLTKRRDIEAAAARTPVHLMIFDLLWLDGNSLMELPYSQRREILESAVEPAGEDGH
VQVPPALEMSMDEAVEASRELGLEGVMAKRRTSTYSPGRRSKSWIKLKNSFTQEVVIVGW
RPGKGNRASKIGSLLVAVPDGHELTYIGRVGSGLSEKDLALVGGKLKKLARKTPPLEGVP
HADASDAQWVRPVLVGEVTYSERTATGKLRHPAWRGLRPDKKPSDVVVEIP
NT seq 2676 nt   +upstreamnt  +downstreamnt
atggcgagcagcggagcgggtctgaagcagcaggaaactgtgaacgtggacggccaccgc
ctccggctgaccaatttggacaaggtgttgtatccggaaaccggaaccaccaaggccgac
gtgctgtcctattacgccgccgtcgccgaggcgctgctgccgcattcccgggaccgtccg
gccacccgcaagcgctgggtccacggagtgggagtgcccggagatccggggcaggtcttc
tttcagaaaaacattgagacctcagctcccacgtgggtgaagaggtttccgattgaacac
aaaagcggcaccaacatttatccgctggtcaacgacctggcgacattgacctggctggcc
caaagcgcggccctggaaatccatgtgccgcagtggcggtttggcccgcgcggcaagatc
aataatccggaccgcctggtgctggatctggatccgggggagggcgtggacctggcgcag
tgtgccgaggtggcccgcctggcccgggacatcctctccgacatgggactggacgcccgc
ccggtcaccagcggttccaagggcatccatctgtatgccgcactggacgggatgcagacc
tcggacgaggtgagcgccgtcgcacacgaactcgcgcgggcactggaagcggaccatccg
gacctgatcgtgtccgacatgaaaaagtccctgcggaccggcaaggtcctgctggactgg
agccagaacaacggcaacaaaaccaccatctgcccctattcgctgcgcggccggttcacg
cccacggtggcggcgccgcgcacctgggaagagctcgaggatccggacctcgcccagctg
gactacgaacaggtgatgcagcggctggccgaggacggggatccgctaaccggcatggac
tccggctccggggaactggacgccgaggcactggaggacgccggctcggaaggaaccggc
gcgggacctgcggaccggctcagtaagtaccgcagcatgcgcgacgccgctaaaaccccg
gaacctgttccggccgaacccgcggagccctccgaaggcaacagctttgtcatccaggag
caccacgcccggcggctgcactgggacttccggctggaacatgacggcgtcctggtctcc
tgggcgctgcccaagggaccgccggattccccggaccagaaccatctggcagtccagact
gaggatcatccgctggactacggcagctttgcggggaccatccccaagggggagtacggc
gccggcgaggtgcggatctgggaccacggaacctatgaaccggaaaaatggcgtgacggc
aaggaggtcattgccgtgctgcacggccagcccgacggcggccttgcctccgaaggcagc
gcggaccgccgcttcgccctgatccacaccggaggcaagggcggggccaacaactggctg
atccatctcatgaagcaccagcctgagccgcgggatccggcggacactcccgacattccc
gatactcccgatgaggcggacaaagccaacaaagcggacaacgcggacaagggtgatccg
aaggccagggatgccgacgaggcggaagattcgcccgtcgaaaccgtggcagccgccgcc
gcagcgccgcctccaggggccaaaacccttccggacaccgccgggacagccaaggccgtt
gcggcggacgccggggaacacggcatgcccgccgtggaacctatgctggccaccctcgga
acccgcgcggacgtcaacgaagacgacgaatgggcctttgaaatgaagtgggacggcgtc
cgagcggtggtggatgtgacgccggagggaacccggctgatcagccgcaacggcaatgac
atgaccgccgcctatcccgaactgcaggaactggggcggcatctgaacggggaacgcgcg
gtcctggacggggaaatcgtggccatcaacaagtcgggccggccggacttcgggctgctc
cagccgcgcatgcacctgaccaagcgccgcgacatagaggccgccgccgcccgcaccccg
gttcacctgatgatctttgacctgttgtggctggacggaaactcgctgatggagctgccg
tactcgcagcggcgggagatcctggaatccgcagtggaaccggcgggggaggacggccac
gttcaggtgccgccggcgctggagatgtccatggatgaggccgtggaggcgagcagggag
ctcggccttgaaggagtcatggccaagcggcgaaccagcacctattcccccggccggcgg
tccaagagctggatcaaactcaagaattccttcacccaggaagtggtgattgtgggctgg
cgcccgggcaagggcaaccgggcatccaaaatcggttcgctgctggtggccgttccggac
ggtcatgagctgacctacattggccgggttggatcgggcctgagcgagaaagatctggcc
ctggtgggcgggaaactgaaaaaactggcccgcaagacacccccgttggagggagttccc
cacgcggacgcctccgacgcccaatgggtccgtcccgtcctggtgggtgaagtgacctat
tccgaacgcaccgccaccggcaagctccgccaccccgcctggcgcggactgcgcccggac
aagaaaccctccgacgtcgtcgtcgaaatcccctga

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