Acetobacter oryzifermentans: WG31_05480 Help Entry WG31_05480        CDS       T04478                                  Name (GenBank) RNA polymerase subunit sigma   KO K03086   RNA polymerase primary sigma factor Organism asv  Acetobacter oryzifermentans Brite KEGG Orthology (KO) [BR:asv00001]  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     WG31_05480  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:asv03021]     WG31_05480 Transcription machinery [BR:asv03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      WG31_05480 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma70_ner Sigma70_r3 Sigma70_r1_1 Sigma70_r2 Sigma70_r4 Sigma70_r1_2 Motif Other DBs NCBI-ProteinID:  ANA13532 LinkDB All DBs Position 1125632..1127623 Genome browser AA seq 663 aa AA seqDB search MATKTASTNAAQEQDGDTTLLDTRSSAVKKLIAKGRERGCITFDELNAVLPQDKMSSEQI EDIMAVLSEMGIQVVENEDNDNEEAEPKKAAAESEDADAEEEAETEAEAESPTGNVNAES VGRTDDPVRMYLREMGTVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTFRAIISWHEM IRNNEMLLRDIVDLEAMQSGGNPLEEGGDGTFNEAESDSDSEEAEEPETEGEGDIESEGS GLSLSALEEKLKPEILAHFDEIEPLYAALRKLQVQRIEALTSGEDVDGNFEENYVALREK LVGKVEQVHLHNNRIEDLVAQLKQMFQKLNMLEGRMLRLAESCRVSREDFLLKYRGRELD PGWMDMVSALSGRSWKNFVAKHANTVVDLRDQVAQLAQETGLPIGEFRRVYATVARGERD SARAKKEMIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYA TWWIRQAITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPL EKVRKVLKIAKEPISLETPIGDEEDSHLGDFIEDKTAIIPLDAAIQTNLREATTRVLASL TPREERVLRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFL DDN NT seq 1992 nt NT seq  +upstreamnt  +downstreamnt atggcgacaaaaacggcatcaaccaacgcagcgcaggaacaggatggggataccaccctg cttgatacgcggtcttctgcagtcaaaaaactgattgccaaagggcgtgagcgcgggtgc attacgtttgatgagctgaatgccgttctcccgcaggacaagatgtcttctgaacagatt gaagacattatggctgtgttgtctgaaatgggtattcaggttgtcgaaaacgaagataac gacaacgaagaagctgaacccaaaaaagccgccgctgaaagcgaagatgcagatgcggag gaagaggctgaaaccgaagctgaagccgaaagcccaaccggcaacgtaaatgctgaaagc gtaggccgcacggatgacccggtgcggatgtatctgcgcgaaatgggcacggtggaactg ctctcccgcgagggcgaaattgctattgccaagcggattgaggctggccgcgatgaaatg attggcggcttgtgtgaaagcccgctgacattccgcgccatcatctcctggcatgagatg atccgtaacaatgaaatgctgctgcgtgacattgtggatctggaagccatgcaaagcgga ggcaacccgctagaagaaggcggagacggcacgtttaacgaagccgaatccgattcggac tcggaagaggcagaagagccagaaaccgagggcgagggcgatattgaaagcgaaggcagc ggcctttccctttctgcgctggaagaaaagcttaagccggaaattctggcgcattttgat gagatcgaaccgctttatgcagctctgcgtaagttgcaggttcaacggattgaagccctg acatctggtgaagatgttgatgggaattttgaagaaaactacgttgccctgcgtgaaaaa ctggtgggcaaggtagagcaggtacacctgcacaataaccggattgaagatctggttgcc cagcttaaacagatgttccagaagctaaacatgctggaagggcgcatgctgcgtctggca gaaagctgccgtgtctcgcgtgaagatttcttgctgaaataccgtgggcgtgagcttgat ccgggctggatggacatggtttccgccctgtctggccgttcatggaaaaactttgtggcc aagcacgccaacacagtggttgacctgcgtgatcaggttgcgcaactggcgcaggaaacg ggtttgccgattggtgaattccgccgtgtgtatgcaacggttgcacgtggtgagcgtgat tctgcccgcgctaaaaaggaaatgatcgaagctaacctgcggctggttatttccattgcc aaaaaatacaccaaccgcggccttcagttccttgatctgattcaggaaggcaatatcggc ttgatgaaggcggtggataagtttgaataccgccgtggctacaagttctccacttatgca acgtggtggatcaggcaggctattacgcgctccattgcggatcaggcgcgtaccatccgt attcctgtgcatatgatcgaaacgatcaacaaactggtgcgcacatcccgccagatgctg catgaaatcgggcgtgaacctgctccggaagaactggctgaaaagctgggtatgccgctg gaaaaagtgcgcaaggtgctaaaaattgccaaggagcccatctccctcgaaaccccgatt ggggatgaggaagatagccatcttggtgattttatcgaggataaaacggctattattccg ctggatgccgctatccagaccaacctgcgtgaggccacaacccgcgttctggcctctctc accccgcgtgaagaacgcgtgctgcgtatgcgctttggtatcggcatgaacaccgatcac acgctggaagaagttggccagcagtttaacgtgacgcgtgaacgtatccgccagattgaa gccaaggccctgcgtaagcttaaacatccaagccgtagccgtaagctgcgttccttcttg gatgataactga

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