Acetobacter senegalensis: ASN_163
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Entry
ASN_163 CDS
T04217
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
asz
Acetobacter senegalensis
Pathway
asz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
asz00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ASN_163 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
asz03021
]
ASN_163 (rpoD)
Transcription machinery [BR:
asz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ASN_163 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r1_1
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
CEF39608
UniProt:
A0A0U5EVJ9
LinkDB
All DBs
Position
I:complement(91670..93640)
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AA seq
656 aa
AA seq
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MATKTASGNVAQAEQDGDTTLLDTQSAAVKKLIAKGREHGCITFDELNAVLPQDKMSSEQ
IEDIMAMLSEMGIQVVESEEGEDAETAKANTAEGEEAAEEDAEEAETPTGNVNAENLGRT
DDPVRMYLREMGTVELLSREGEIAIAKRIEAGRDEMIGGLCESPLTFRAIISWHEMIRNN
EMLLRDIVDLEAMQSGGNPPGEGEEGFESDESEESDEAEAETETEGEVEGEGSGLSLSAL
EEKLKPEILAHFEEIEPLYEKLRQLQVQRIEALTAGEAVEDQSELVYAQLRDELVGKVEQ
VHLHNNRIEDLVMQLKEMFRSLNVLEGRMLRLAESCRVSREDFLLKYRGRELDPSWMDMV
SALPGKSWKNFVAKHSDTVVDLRNQVAQLAQDTGLPIGEFRRVYATVARGERDSARAKKE
MIEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQA
ITRSIADQARTIRIPVHMIETINKLVRTSRQMLHEIGREPAPEELAEKLGMPLEKVRKVL
KIAKEPISLETPIGDEEDSHLGDFIEDKTAVIPLDAAIQTNLREATTRVLASLTPREERV
LRMRFGIGMNTDHTLEEVGQQFNVTRERIRQIEAKALRKLKHPSRSRKLRSFLDDN
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atggcgacaaaaacggcatcaggtaacgtagcgcaggcagagcaggatggtgacaccacc
ctgcttgatacgcagtctgccgcggtcaagaaactgatcgcgaaagggcgcgagcacggg
tgcatcacgtttgatgaactgaatgctgtcctaccgcaggacaagatgtcttcagagcag
attgaagatatcatggccatgctctccgaaatgggcattcaggtggtggaaagcgaggaa
ggcgaagacgctgaaaccgccaaggcaaatactgccgaaggcgaggaagcggctgaagaa
gacgccgaagaagcggaaaccccgacagggaacgtcaacgccgagaatctgggccgcacg
gatgatcctgtgcggatgtatctgcgcgagatgggcaccgttgagctgctctcccgcgaa
ggcgaaattgcgattgccaaacggattgaggctggccgcgatgaaatgattggtgggctg
tgcgaaagcccgctgacgttccgcgccatcatctcctggcatgagatgatccgtaacaat
gaaatgctgctgcgtgacattgtggatctggaagccatgcagtctggcggcaacccgccc
ggcgaaggtgaggaaggtttcgagagcgacgaatcggaagagtcagacgaggcggaagcc
gaaactgaaaccgaaggcgaagtagaaggtgagggcagcggtctctccctgtctgcgctg
gaagaaaaactgaagcctgaaatcctcgcgcatttcgaagaaattgaaccgctttacgaa
aaactgcgtcagttgcaggtgcagcgcattgaagcgctgaccgcaggggaagcagtggaa
gaccagtccgagctggtttatgcccagttgcgcgatgaactggtgggcaaggtggagcag
gttcatctgcacaacaaccggattgaagatctggtgatgcagttgaaagagatgttccgg
agcctgaatgttctggaaggccgcatgctgcgtctggcagaaagctgccgcgtctcccgt
gaggacttcctgctcaagtatcgcgggcgcgaacttgatccctcatggatggatatggtc
tccgcgctgccgggcaaatcctggaaaaactttgtcgccaagcatagcgataccgtggtg
gacctgcggaatcaggttgcccagcttgcgcaggatacgggcctgcccattggcgagttc
cgtcgcgtctatgcaacggtggctcgtggtgaacgtgattctgcgcgcgccaagaaggaa
atgattgaagccaacctgcggttggtgatctccattgccaagaaatacaccaatcgtggc
ttgcagttccttgacctgattcaggaaggcaatatcggcctgatgaaggcggtggataaa
tttgaataccgccgtggctacaaattctccacctatgccacatggtggattcgtcaggcc
atcacccgttctatcgcggatcaggcgcgcaccatccgtattccggtgcatatgatcgaa
accatcaacaagctggtgcggacgtcccgccagatgttgcatgagattggtcgggaacct
gcgccggaagaactggctgaaaagctgggtatgccgcttgaaaaagttcgcaaggtgctg
aagatcgccaaggagccgatctctcttgaaaccccgatcggggacgaagaagacagccat
ctgggtgacttcattgaggataaaacggctgttattccgctggatgcagctattcagacc
aacctgcgtgaagctacaacccgcgttctggcctcccttaccccgcgtgaagagcgtgtg
ctgcgcatgcgcttcgggattggcatgaacacggaccacacgctggaagaagttggccag
cagttcaacgtgacgcgtgaacgtattcgtcagattgaagccaaggccctgcgtaaactc
aaacacccgagccgtagccgcaagctgcgttccttcctggatgataactaa
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