KEGG   Atopobium sp. oral taxon 416: J4859_01785
Entry
J4859_01785       CDS       T07170                                 
Name
(GenBank) sugar nucleotide-binding protein
  KO
K23987  dTDP-4-dehydrorhamnose 3,5-epimerase/reductase [EC:5.1.3.13 1.1.1.133]
Organism
atb  Atopobium sp. oral taxon 416
Pathway
atb00521  Streptomycin biosynthesis
atb00523  Polyketide sugar unit biosynthesis
atb00541  O-Antigen nucleotide sugar biosynthesis
atb01100  Metabolic pathways
atb01110  Biosynthesis of secondary metabolites
atb01250  Biosynthesis of nucleotide sugars
Module
atb_M00793  dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:atb00001]
 09100 Metabolism
  09107 Glycan biosynthesis and metabolism
   00541 O-Antigen nucleotide sugar biosynthesis
    J4859_01785
  09109 Metabolism of terpenoids and polyketides
   00523 Polyketide sugar unit biosynthesis
    J4859_01785
  09110 Biosynthesis of other secondary metabolites
   00521 Streptomycin biosynthesis
    J4859_01785
Enzymes [BR:atb01000]
 1. Oxidoreductases
  1.1  Acting on the CH-OH group of donors
   1.1.1  With NAD+ or NADP+ as acceptor
    1.1.1.133  dTDP-4-dehydrorhamnose reductase
     J4859_01785
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.3  Acting on carbohydrates and derivatives
    5.1.3.13  dTDP-4-dehydrorhamnose 3,5-epimerase
     J4859_01785
SSDB
Motif
Pfam: RmlD_sub_bind dTDP_sugar_isom Epimerase GDP_Man_Dehyd
Other DBs
NCBI-ProteinID: QUC03713
LinkDB
Position
345515..346981
AA seq 488 aa
MSEFAFEKDLEVHETDIDGLKVVELSVHGDSRGWFKENWQRAKMVYLGIPDFHVVQNNIS
FNAERGVTRGIHAEPWNKFISVATGSIFGAWVDLRAGSATFGKAYTTTLDPSRAIYVPRG
VGNSFQALEDGTAYTYLVDAYWSAELKRTYTFVNLADPDLAIKWPIPLSKAILSEADLHH
PYLKDVVPMVPKRTLVTGCRGQLGRAVRQLAESRGLLTSFDFCDIDTFDFSDPSSYSEYD
WDLYGTVINCGAWTAVDKAETPEGRVSCWEANAQGPALLARTCAEHGIVLVHISSDYVFD
GTKEPHTETEPFSPLSVYGQSKAAGDLAVAGCPKHYILRSSWVIGDGHNFVKTMASLSDR
CADPDDTLDHVTVVDDQLGRLTFTRDMAAAIFHLLDTHVAYGTYGCTGSGAVKSWADIAR
AVFQQRHGNGSAVVPVSTKEYYASAKGPIALRPVHSALSLAKLEAAGFHMPDWEEELTKY
LSSLLESR
NT seq 1467 nt   +upstreamnt  +downstreamnt
atgtctgagttcgcattcgaaaaagatcttgaagtccacgagaccgacatagacggcctc
aaggtcgtggagctctccgtgcatggagactcgagaggctggttcaaggagaactggcag
agggccaagatggtgtacttgggaatccccgacttccatgtcgtgcagaacaacatctcc
ttcaacgcggagaggggcgtcacgcgtggcatccatgcggagccatggaacaagttcatc
tccgtcgccacgggttccatctttggcgcatgggtcgatctcagggccggctctgccacc
ttcgggaaggcctacaccacgacgctcgatccctcccgtgccatctatgtcccgagaggc
gttggcaactcctttcaggccctggaggacggcacggcctatacctacctcgtggatgcg
tactggtcggcggagctcaagcgcacctacaccttcgtgaacctagcggaccccgatctt
gctatcaagtggcccatcccgctctctaaagccatactctccgaggcagacctccaccat
ccgtatctcaaggatgtcgtccccatggtcccgaagaggacgctcgtgacaggatgcagg
ggacagctgggacgggccgtgcggcagctcgccgagagcaggggcctcctcacctccttc
gacttctgtgatatcgataccttcgacttctcggatccttcttcctactccgagtacgac
tgggacctctatggtaccgtgatcaactgcggtgcctggacagcggtggataaggcggag
accccagaaggccgcgtctcctgctgggaggcgaacgcccaaggcccggccctgctcgca
cgcacctgtgcagagcatggcatcgtgctcgttcacatctcctccgactacgtcttcgac
gggacgaaggagccccacacggagacagagcccttcagcccgctttccgtctacggccag
tccaaggcagcaggagacctcgccgtcgcaggatgtccgaagcactatatcctgaggagc
tcttgggtcataggggacggtcacaactttgtgaagaccatggcttcgctctccgacagg
tgcgcagaccccgatgatacccttgaccacgtcaccgtcgtggacgaccagctgggacgt
ctcaccttcacgcgtgacatggcggcagctatcttccatcttctggacacccatgtggca
tatggcacctacggctgcacaggatcgggggctgtgaagagctgggcggacatagcacgt
gccgtcttccagcagaggcacggcaacggcagtgctgttgtgcccgtctccaccaaggaa
tactacgcatccgctaagggacccatagccctcaggccggtgcactctgccctttcgctc
gccaagctcgaggctgcaggcttccacatgcccgactgggaggaagagctcacgaaatac
ctttcttcacttctggagagccgttag

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