Aethina tumida (small hive beetle): 109594934
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Entry
109594934 CDS
T06105
Name
(RefSeq) ATP-dependent RNA helicase DDX54
KO
K14808
ATP-dependent RNA helicase DDX54/DBP10 [EC:
5.6.2.7
]
Organism
atd
Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atd03009
]
109594934
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109594934
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
Pre-60S particles
Helicases
109594934
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DBP10CT
DUF1604
Motif
Other DBs
NCBI-GeneID:
109594934
NCBI-ProteinID:
XP_019865758
EnsemblRapid:
ENSATDG00005006258
LinkDB
All DBs
Position
3:join(32736830..32737012,32737068..32737235,32737302..32737657,32737712..32737880,32737938..32738148,32738207..32738421,32738546..32738749,32738801..32739120,32739174..32739309,32739367..32739705)
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AA seq
766 aa
AA seq
DB search
MQDLPGFADPNTAVDIDPDDEPVKKKGPKKSGGFQSMNLSFNLIRGITKRGYKQPTPIQR
KTIPLILEGRDVVAMARTGSGKTACFLIPMFEKLKIRSAKAGARALILSPTRELALQTLK
FIKELGRFCDLKAAVILGGDSMDDQFSAIHGNPDIIVATPGRFLHVCVEMELKLNSIEYI
VFDEADRLFEMGLGEQLTEIVGRLPDARQTVMFSATLPKVLVDFAKAGLSDPVLLRLDVE
SKLPSTLQLWYFPVRPEEKLAALLVLLKSHIDKKQQTVVFAATKHHVEYLHVILDKFGIS
NTYIYSNLDPSARKIHAAKFSTGKVKVLVVTDVAARGIDIPQLDNVINYNFPAKPKLFVH
RVGRCARAGRDGTAFSLVTPDEYAYLVDLYLFLGRPLDIATEKNKQGSIGKIPQSLIEEQ
HSSLVTLHDNQIDLVSMRKVTENGYQQYLRSRPPASSDSNKRIKELPISTCYIHHLFKSS
EFESECERESLLDKMKNYRPQGTIFEICGKNKSQEYLTMKEKRAVHKDKIADHHQKVEKK
KIEIESALTTHETNLQSSNQEDIQETFQKVVVPKKRKIDDLYKPKNKKQKVKDENYIPYA
PKDQHTEEGLAINSFVKEANRVQMDITGDSEETMRIAKQTKKWDRVKKKMVGVPDPKAGK
IKTESGVWIPATFKSNRYAQWKEKTKVDNEDNNDDEEEDNTPQNVTKGRPNTHWARHNEK
IKLKQRKSEMKSTDQILKARQIAEKKKQRQKGKKGRGKGKGKRPRK
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgcaagatttaccgggatttgctgatcccaatacagctgtggatatagatcctgacgat
gaaccggttaaaaagaaaggacctaaaaaaagtggtggatttcagtctatgaatttgagt
tttaatttaattcgaggtatcactaaaaggggctataaacaaccaacaccaattcaaagg
aagacaattcctttgatattagaaggaagagatgttgttgctatggctcgaacaggcagt
ggtaaaactgcttgttttctaattcccatgtttgagaagttaaaaattcgcagtgcgaaa
gccggagcaagagctctgatattatcaccaaccagagaattggcactacagacacttaaa
tttatcaaagaattgggaaggttctgtgatctcaaggctgcagtaattctgggtggtgat
tcaatggatgatcaattttctgccatccatggaaatccagatataattgttgcaactcct
ggccgtttcttgcatgtatgtgttgaaatggaattgaagttgaacagtatagaatatata
gtatttgatgaagccgacagattatttgaaatgggattaggagaacagcttacagaaata
gtggggcgattgccagatgccagacaaactgttatgttttctgcaactctaccaaaggtc
ttagtagacttcgcaaaagcaggtttaagcgatccagtgcttcttagattggatgtggaa
tcaaagttgccttcaactttacaactgtggtattttccagtcagaccagaggaaaaatta
gctgcactattggttctgcttaaatcacacattgacaaaaaacaacagacagtggttttt
gctgctaccaaacatcatgtggaatatttacatgtgattttggataaatttggtataagc
aacacttatatttattcaaacttggacccctccgcccgcaaaatccacgcagcgaaattc
agtacaggaaaagttaaagttcttgttgtaacagatgttgctgcaagaggtatagatata
cctcaattggacaacgtgattaattacaatttccctgctaaacccaaattgtttgtgcac
agagttggtcgttgtgccagagctggaagagatggtactgctttctcactggttacacct
gatgaatatgcatatctagtcgatttgtatctatttcttggacgacctctcgacattgca
actgagaaaaataaacagggatccataggaaaaattccgcaatccttgatagaagaacag
cacagttcccttgtcacacttcatgataatcaaattgatttggttagtatgaggaaggtc
acagaaaatggatatcagcaatacttaagatctagaccaccagcatcaagtgacagtaac
aaaagaataaaagaacttccaatatccacatgctatattcatcatctgttcaagtctagt
gaatttgaaagtgaatgtgaaagggaaagtcttttggataaaatgaaaaattatagacct
caaggaacaatatttgaaatctgtggtaaaaataaatctcaagaatatttaacaatgaaa
gaaaaacgagcagtgcacaaggataaaatagcagatcatcatcagaaagttgagaagaaa
aaaattgaaattgaatctgccttaactacccatgaaacaaatttacagagcagtaatcag
gaagacatacaagaaacatttcaaaaagttgtggttcccaaaaaaagaaaaattgatgat
ttgtataaacctaaaaacaaaaagcagaaagttaaagatgaaaattatattccatatgct
cctaaggatcaacatacagaagaaggattggcaattaatagttttgtcaaagaagcaaac
agagtgcaaatggacataactggggattctgaagaaactatgaggattgcaaaacaaact
aaaaagtgggatagagtaaagaaaaagatggttggagtgcctgatcccaaagcaggaaaa
attaagacagaatctggagtgtggattcccgctaccttcaaaagtaatcgctacgcgcaa
tggaaagaaaagacaaaagtggataatgaggataacaatgatgatgaggaagaggataat
acacctcaaaatgttacaaaaggacgtccaaacactcactgggctagacataatgaaaag
ataaagttgaaacaaaggaagtctgagatgaagagtacagaccaaattctgaaggccaga
cagattgctgaaaagaaaaagcaaagacagaaaggcaaaaaaggcagaggtaaaggtaaa
gggaagagacctagaaaatag
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