KEGG   Aethina tumida (small hive beetle): 109598521
Entry
109598521         CDS       T06105                                 
Name
(RefSeq) SR-related and CTD-associated factor 4
  KO
K13191  RNA-binding protein 16
Organism
atd  Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:atd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:atd03021]
    109598521
   03041 Spliceosome [BR:atd03041]
    109598521
Transcription machinery [BR:atd03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     109598521
Spliceosome [BR:atd03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA binding proteins (RBPs)
    109598521
SSDB
Motif
Pfam: CID RRM_1 RRM_occluded RRM_5 RNA_bind
Other DBs
NCBI-GeneID: 109598521
NCBI-ProteinID: XP_019869993
EnsemblRapid: ENSATDG00005008334
LinkDB
Position
3:complement(join(10642078..10642535,10642597..10642841,10643745..10644224,10644283..10644531,10644626..10645437,10645496..10645704,10645760..10646048,10646619..10646807,10647315..10647471,10647532..10647710,10648865..10648944,10649380..10649539,10650508..10650795,10650946..10650975))
AA seq 1274 aa
MDAVKAFNAELSALYEVRPPISKAKMTAITRGAIKAIKFYKHVVQSVEKFILKCKSEYKV
PGLYVIDSIVRQSRHQFGDKDVFAPRFAKNMQQTFVNLFKCPAEDKSKIIRVLNLWQKNQ
VFAPEVIQPLFDLTDPNNPIHKELGTPMQSNGINQNAAKGSPALQKTPTKGSQPQGNEVA
HGASNLNLTDPVILAQLQRLLQRGADNSGKADGQVHFDKKLLDYDYGDDDEEVNPSPRPP
ADSVSSLLANPEVIRHLQTIQQGMQSSHPDMDMDKMRKLQEMKQQEDEFEKHLAQTVPNL
PFAAECDFKPGGNASVMGGYYLPPGQDLTLPPPGYKTAEYDMSQPNNVDYSGGNNTSGDV
EVITLDHDDSRSVSPDDRYRDRRRRSRSRDKSRDRGRDRDRDRRRRSRDRSRSRGRRHRS
RSRDRNRTKEKEKEKETEKDKERKKRGLPAIRKENLSVCSTTLWVGHLSKLVHQDDLSNT
FGEFGDVVNIDLISPRGCAFIVMHRRQDAARCLNKLKNHVLHGKAITLAWAPGKGVKGKD
LKDYWEGDLGVSYIPWSKLKPDIDLEMLEEGGMIDEDTMPEWMKNKMAAMSATRNPNAAY
MALTDVTGANPAPTVDTSQPPPIPGAGLLQPSLTLSLMNPFQFNNRLLGPVGMNVTGMMP
PNIPIGVPPPNMPTAAMMPNQLLGLGSPFQGPPGIMQQMMDGKASSQSSDSKGSLLNMTQ
PFGMVPQPPVGLPAPHDDNMDIEMEDAEKPEVKPLSLSEQLQASMNQFNRDGDKRDNGRD
ERGRRRSRSRDRDRDHNRDRERRGSRERDRERRDSRDTSRGGRGDGRRERRDDRRDRPNR
WGDRDNGRRDNPGRENDIEGRRDREKTLNDRLQEMAGMPDRSNDRPGRERKVSESGSVKK
FGQELAPPPDPALFMHGAGGPPGDFGPPSGADFGPAGPDYGMRGPPMRGPPIDDYPPDFN
SRMNGPMMGPPDMMMDGPPDMMDGPPHLMDGPPHLMDGPPHLMDGPPHLMDGPPHLMDGP
PHLLDGPPHLMDGPHMGLPHRMHHDDGFRRGGRRGDYRDEFESRMRGPPDFYPRDDYGPR
GPPHMRGGPPDFGPRGPPMMRGDFGPRGPPRFGPRGPHMRARAPRFDSFGPRFDGPPDFY
RGPGGPRGPPPPGMYDEPPHLMRHRGGPPFDDRRRSGRSDFHESDGPPVERPERRSRWGN
DTPTADEVPVKQDAEEEQKDEGKGGNCTPLVDECPVPGEEPVSVPVVEEPPEECAPPAEP
EAAPQEEPVEEKAE
NT seq 3825 nt   +upstreamnt  +downstreamnt
atggatgcggttaaagccttcaatgcagagctctctgccctgtatgaggtgagacctcca
atatccaaagccaaaatgactgccatcacgagaggtgctatcaaagccataaagttctat
aaacatgtagtgcaaagtgtggagaagttcattttaaagtgcaaatctgaatacaaagtg
cctggactctatgtaatagacagtatagtgcgccaatcgagacaccagtttggtgacaag
gatgtgtttgcacccagatttgccaagaatatgcaacagacatttgttaatcttttcaaa
tgccccgctgaggacaaaagtaaaataatcagggttctgaacctttggcaaaagaatcag
gtgttcgctccagaagtaatacagcccctgttcgatctgacggaccccaacaacccgatc
cacaaagaattaggcacgccgatgcagtcgaacggaattaatcaaaacgccgcaaaaggt
tcccccgcactgcaaaagacaccgaccaaaggaagtcaaccgcaagggaatgaggtcgca
cacggagcttcgaatttgaatttgacggacccagtgattctggcccagcttcagcgcctg
ttgcagaggggcgcagacaattcgggtaaagcggacggtcaagtgcacttcgacaagaaa
ctgctcgattatgattacggcgacgatgacgaagaggtcaatccgtcgccgcgtcctccc
gccgattccgtctcgagtcttcttgcgaatcctgaggtgatcagacatctgcagacgata
caacagggcatgcagtcgagtcaccccgacatggacatggacaagatgaggaagctgcag
gaaatgaagcagcaggaagacgagtttgagaaacacctcgcacaaaccgtgccgaacttg
ccgttcgccgcggagtgcgatttcaaaccgggcggcaacgcatcggtgatgggcggctat
tatctgccgcccggccaagacctgaccctgccgccacccggctacaagaccgccgagtac
gacatgtcgcaacccaacaacgtggactatagcggcggcaataacactagtggagacgtc
gaagtgatcaccctggatcatgatgattcacgtagcgtctcgcccgacgaccgatacaga
gatcgtagacgacgaagcagatctcgggacaaatcgcgggaccgaggcagagaccgcgac
agggaccgaagacgacggtcccgcgatcggtccaggtccagaggcagaagacacaggtcc
cgttccagagatcggaatcggaccaaagaaaaggaaaaagagaaagagaccgagaaagac
aaagagaggaagaagcgtggtctgcctgcgatcagaaaggagaatttgagcgtgtgcagt
accacgctttgggttggacatctttcgaaactggttcatcaggacgatctgtcgaatacg
tttggcgagttcggcgacgtggtcaacatagatctgatatcgcctagggggtgtgcattt
attgttatgcacaggagacaggacgcggccaggtgtttgaacaaactgaaaaaccacgtg
cttcacgggaaagcaataacgttggcttgggcccccggtaaaggtgtcaaaggcaaggac
ctaaaggattactgggagggcgatctgggcgtgtcgtacattccgtggagcaaactcaag
ccggacatcgatttggagatgctcgaggagggcggcatgatcgatgaggatacgatgccc
gaatggatgaagaacaaaatggcagcaatgtctgccactcgcaatccgaacgccgcctac
atggcactgacggacgtgacaggggccaatcccgcaccgaccgtcgacactagccaaccg
ccgcccataccgggtgccggcctccttcaaccgtcgctcacgttgtcgctcatgaatccg
ttccaattcaacaacagactgttgggaccggtgggcatgaacgtgaccggtatgatgccg
cccaacataccgatcggtgtgccaccacccaacatgcccacggcggccatgatgcccaac
caacttctcggcttgggttcgccgttccaggggccgccaggcataatgcagcagatgatg
gacggcaaagccagttcgcagtcatcggactcgaaagggtcgttgttgaacatgacacag
ccttttggcatggtacctcaacctccagtcggcttgccggcacctcacgatgataatatg
gacattgagatggaggatgcggaaaagccggaagttaagccattgtcgttgagtgagcag
ttgcaggcgtcgatgaatcagtttaacagggatggcgacaaaagagacaatggccgagac
gaaagggggaggaggcggtcaaggagtagagatcgcgacagagatcacaatcgagacaga
gagagacgtggtagcagagaaagagatcgggaacggcgtgactctagggatacgagtcgc
ggagggcggggcgatggccgtcgtgaacgcagggacgatcgccgtgaccggccgaaccgc
tggggtgatcgggacaacggccgccgcgacaatcccggcagggagaacgacatcgaaggt
cgcagagatcgagagaaaacgctcaacgatcgtctacaggaaatggcaggaatgcccgac
aggtcgaatgaccgtccgggaagggaacgtaaagtgtcggagtccggttccgtgaagaag
tttggccaggaattggcgccgccgcctgacccggccctctttatgcacggtgccggaggc
ccgcccggcgatttcggtccgccttccggcgccgactttgggccggccggacccgattac
gggatgcgtggaccgccgatgcgtggtccaccgatcgacgattacccgcctgatttcaat
tcgcgcatgaacggtccgatgatgggtccgccagatatgatgatggacgggccgccggat
atgatggacggaccgccgcacttgatggacgggccgcctcacttgatggacggaccgcct
cacttaatggacgggccgccccatttgatggatggaccgcctcacttaatggacgggccg
ccccatttattggatgggcccccacacttaatggatgggccgcacatgggactacctcat
aggatgcatcatgacgacggcttccgaagaggcggcagacgcggcgactaccgcgacgaa
ttcgaatcgaggatgcgcggcccccccgacttctacccacgcgatgactacggtcctcgc
ggtccgccccatatgcgcgggggcccgccggacttcggacctcgcggtcctccgatgatg
cgcggcgactttgggcccaggggtccgcctcggttcgggccacggggaccacacatgcga
gccagagcaccccgatttgacagttttggtccgcgattcgacggtccgccggacttctac
cggggtcccggcggtcctaggggaccaccgccgcccggtatgtacgacgaaccgccacat
cttatgagacatcggggcggcccgccgttcgacgatcgccgacgaagcggccgatccgat
ttccacgagtccgacggtccgccggtcgagagaccggaacggcgtagccggtggggtaat
gatacgccaacggccgacgaggtgccggtaaaacaggatgccgaagaagaacaaaaggac
gagggcaaaggtggtaactgtacgccgttggtggatgaatgtccggtgccgggagaggag
cccgtatctgtgcctgtagtggaggaaccaccggaagaatgtgcaccaccagcggaaccg
gaggcagcgccccaagaggaacctgttgaagagaaagctgagtaa

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