KEGG   Aethina tumida (small hive beetle): 109599441
Entry
109599441         CDS       T06105                                 
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
atd  Aethina tumida (small hive beetle)
Pathway
atd03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:atd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    109599441
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:atd03400]
    109599441
Enzymes [BR:atd01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     109599441
DNA repair and recombination proteins [BR:atd03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     109599441
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N zf-PARP LIG3_BRCT DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 109599441
NCBI-ProteinID: XP_049820956
LinkDB
Position
3:complement(21379491..21382148)
AA seq 885 aa
MSDTEEEKPFAIEIAKQGRAGCKKCKQKCPQGELRIAKLVANPFGEGKMKSWHHVDCLFE
VFKKQRQNTRRIESISDIDGWNLLSAENQKLILDKIEEFDKTFHKKFGTSPKKKPAENNI
KKTTELVETQETPSSSPVKSVKSKDLLFKGFRILVADISNVSSYTEKTNLVAKVFKDGFD
GKGFKGDIILWCRLLLPGVIKRVYNLQSKQLVKLFSRIFHTDQESMLEHLEQGDIGETIE
EFFINSNKIKPAKNSSLTIQEVDDFLEELTKLTKEDEQIFHFKKFVPKCTANDLKMVIRL
IVHDLRMNAGAKHVLEAVHPDAYEVYQSCRDLNKVISRCLHNLKEVKSSSVKATINVMTP
VLPMLANACKSVQQAIKACPNGMYSEIKYDGERVQVHKQGTEFKYFSRNLKPVLQHKIGH
FKDYIPKAFPNANDLILDSEILMIDTVTGNPLPFGTLGVHKKNEFKDASVCLFVFDCIYY
NGESLTHKPIKYRKKILQENMTEIPNHIVFSEMKEINNPEDLKAMIAKVLSAGLEGLVLK
DLNSIYEPGKRHWLKVKKDYLFDGAMADTADLIVLGAWYGTGKKGGMMSTFLMGAYNKFS
KKFCTVTKVHTGHDDKTLERLQSELIMEKISCDPSKVPSWLKCTKTMVPDFVAKDPKKQP
VWEITGAEFTKHEVHTADGISIRFPRVTKIRDDKHWESATTVDELKVLYEKSKETTDVSL
LLNAPNNDLQESPSKKKKTDDESTKINTLFEAMNNKGQDKLKRKISNDKSPSPRKKNKGK
IEVEKYFENQLPNYFPNVKAILEPNIDKNCDLIRYFIAYGGVILTENEASEATHVIYLDN
KIIEPYIVCPKTAVHVVINWIWDTVINKGIPKDIRPYIVRWDPLE
NT seq 2658 nt   +upstreamnt  +downstreamnt
atgtctgatacagaagaagaaaaacctttcgccatagaaatcgcaaaacaaggtagagca
ggatgtaaaaagtgtaaacagaaatgtcctcaaggagaactcagaatagcgaaactggta
gcaaatccttttggtgagggcaaaatgaagtcctggcaccatgttgactgtctatttgag
gtttttaaaaaacaaaggcaaaatactagaagaatagaaagcataagtgatatagatgga
tggaatttattaagtgctgagaaccaaaaattaatattagataaaattgaagagtttgac
aaaacattccacaagaagtttggaacttcaccaaagaagaaaccagctgaaaacaacatt
aaaaaaaccactgaactagttgagacccaagaaactccttctagttcacctgtaaaatca
gtgaaatcaaaagacttattatttaaaggatttagaattttagtagctgatataagcaat
gtaagcagctatacagaaaaaacaaatttagtggcaaaagttttcaaagatggttttgat
gggaaaggtttcaaaggtgatattattttatggtgtcgtttacttttacctggagttatt
aaaagggtatacaatttacaaagtaaacagcttgttaaattatttagtagaatttttcat
actgatcaagagagtatgcttgaacatttggagcaaggtgacataggtgaaacaattgaa
gaatttttcataaacagcaacaaaataaaacccgctaaaaatagttcacttactatacaa
gaagtggatgatttcttagaagaacttacaaagttaacaaaagaggatgaacagattttt
cattttaaaaaatttgtacccaagtgtactgcaaatgatttaaaaatggttattcgatta
attgtccatgacttaagaatgaatgctggtgctaagcatgttcttgaagctgttcatcca
gatgcatatgaagtttatcagtcttgcagagacttaaataaagttattagtcgatgttta
cacaatttaaaagaagttaaatcatcctctgttaaagctacaattaatgtcatgacacct
gtgttaccaatgcttgcaaatgcctgcaaatctgtgcaacaagccattaaagcttgtcct
aatggcatgtattctgaaataaaatatgatggggaacgtgtacaggttcataaacaggga
actgaatttaaatatttttcacgtaatttaaaaccagttttgcagcataaaattggccat
tttaaagattacatccctaaagctttcccaaatgctaatgacttaatactggacagtgaa
atactgatgattgatactgtgactgggaatcctttaccttttgggacattaggagtgcat
aaaaaaaatgaatttaaggatgccagtgtttgtttgtttgtatttgattgtatttattac
aatggagaaagtttaactcataaaccaattaagtataggaaaaaaatattacaggaaaac
atgacagaaattccaaatcatattgtcttttctgagatgaaggagattaataatcctgaa
gacttaaaagctatgattgccaaagtgctgagtgctggtttggagggcttagtactgaaa
gatttgaacagcatttatgaaccaggcaaaaggcattggttaaaagttaaaaaggactat
ttgtttgatggggcaatggcggacacagcagacctcatagttttaggggcttggtatgga
actggcaagaaaggaggtatgatgtcaacttttcttatgggagcatataataagttttca
aagaaattttgcactgtaacaaaagttcatactggtcatgatgataagactctagaaagg
ttgcaatctgaattaattatggaaaagataagttgtgacccctcaaaagtgcctagttgg
ttaaaatgtactaaaacaatggttcccgattttgtcgctaaagatccaaaaaaacagcca
gtatgggaaattactggggctgaattcactaaacatgaagttcacactgcagatggtatt
tcaatcagattcccaagagttacaaaaataagggacgacaagcactgggaatccgccact
acagttgatgaactaaaagtcctttacgaaaaatctaaagaaacaacagatgtaagttta
ctgttgaatgctcctaataatgatttacaagaatctccaagtaaaaaaaagaaaactgat
gatgaatctacaaaaattaatacactttttgaggcgatgaataataagggacaagataaa
ttgaaacgcaaaatttcaaatgacaaatcacctagtcctcggaaaaaaaataaagggaaa
atagaagtagaaaaatactttgaaaaccaattaccaaattatttccccaatgttaaagca
attcttgaaccaaatattgataaaaactgcgacttaataagatactttattgcatatggt
ggagtaattttaacagaaaatgaggcaagtgaagccacacatgttatatatttggataat
aaaatcattgaaccatatattgtatgtcccaaaactgccgttcatgtagtgataaattgg
atttgggacactgtgataaataagggcatcccaaaagatattagaccttatatagttcga
tgggaccctttagaataa

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