Aethina tumida (small hive beetle): 109602580
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Entry
109602580 CDS
T06105
Name
(RefSeq) probable ATP-dependent RNA helicase DDX55 homolog
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
atd
Aethina tumida (small hive beetle)
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
atd03009
]
109602580
Enzymes [BR:
atd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
109602580
Ribosome biogenesis [BR:
atd03009
]
Eukaryotic type
Pre-60S particles
Helicases
109602580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Motif
Other DBs
NCBI-GeneID:
109602580
NCBI-ProteinID:
XP_049824974
EnsemblRapid:
ENSATDG00005012134
LinkDB
All DBs
Position
6:complement(join(19885353..19885630,19885708..19885900,19885960..19886094,19886156..19886353,19886416..19886928,19887024..19887185,19887242..19887559))
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AA seq
598 aa
AA seq
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MPKSWAEIGVSLHKEVSNGIDSFNFPTMTPVQAATIPQLINKKDVAAEAVTGSGKTLAFL
VPLLDILKKREEKWKKHEVGAVVISPTRELALQTNQVLDQLLQHVSGLSQLLLVGGNSVE
EDTKKFKDKGGNILICTPGRLEDLLTRKFDLNLPNAVKSLEILILDEADRLLDLGFQKSL
DTILSYLPRQRRTGLFSATQTKAVEDLIRAGLRNPVLVSVSAKAKESTPLSLKNYYIVTR
NDGKLATLLSFIHEKHVRKAMLFLPTCACVDYWSSVFGKILPKQLKNELQVMAIHGKMKD
KRNKILDSFRKCDNALLLCTDVMARGIDIPEVDWVLQWDPPANASAFVHRVGRTARQGQE
GCSLILLLENEESYVHFIEKNQRVKLISEPDTATQDNVIALMDQLRNIQKQDRAIMEKAT
RAYVSHVRAYSKHECNLLLKVNELPLGSMAVTYGLLQLPKMPELKNRDLSDFRPLDNDDL
DITTIPYKDKARETIRKQKLEQYKTTGVWPGHKPKNIKKATEPWSLTKQKKEERKEKRQK
RKEKKQIKIANNQPLKKKKRKGVMSEEDLEELKKDVALMKKFKKKKISDEDFDREFCS
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaaagttgggccgaaattggcgtgtcccttcacaaagaagtaagcaatggcatc
gattcgttcaattttccgacaatgacgccggtacaggcggccacaattccacaattgatc
aacaaaaaagatgttgcagccgaagccgtgactggatccggaaagactttggctttttta
gtgcctcttttggatattctgaaaaaacgagaagaaaaatggaagaaacacgaagtggga
gctgttgtcatcagtcctacgagggaattagccttgcaaaccaatcaagtgctagatcaa
ctgctacaacatgtttctggattgtctcagctattgttggttggaggcaacagtgtggaa
gaagatacaaaaaaattcaaagacaaaggtggcaacattcttatatgtactccaggcaga
ctggaggatctattaactagaaaatttgatctcaatttgcctaatgctgtaaaaagtctt
gagattttaattctggatgaagctgaccggttacttgatttgggttttcaaaagtctttg
gacacgatattgagttatttaccaagacaaagacgaacaggactgttctcagccactcaa
actaaagctgtggaagatttaatcagagcgggacttaggaatcctgtcctggtaagtgtt
tcagccaaggccaaagaaagcacaccactttcgctgaaaaactattacatcgtcacgaga
aacgacggcaaactggccaccctattgtccttcatccatgagaaacacgtacgaaaagca
atgctgttccttccgacttgtgcgtgtgtggattactggtcgtcagtattcggtaaaatc
ttaccgaaacaactgaaaaacgagttgcaagttatggcaattcacggtaagatgaaggac
aaacgcaacaaaatcctggatagtttcagaaaatgtgacaatgctttgctgctgtgtacc
gacgtaatggctaggggaatcgacattccggaagtggattgggttttacagtgggatcca
ccggcgaatgccagtgccttcgtccacagagttggcaggacggccagacagggacaggaa
ggctgcagtttgattctcctattggaaaatgaagagagctatgtccatttcattgaaaag
aatcaacgcgtcaagctcatcagtgaaccggacacggccacccaagataatgtgattgca
ttgatggaccaattgagaaacatacaaaaacaagaccgagcaattatggaaaaggccacg
agggcgtacgtttcacatgttagagcgtattccaaacacgagtgcaatttactattaaaa
gtcaatgaactacctttaggaagtatggcagttacttatggactgttgcagctgccgaaa
atgcccgaattaaaaaatagagatttgtcagactttaggccgctcgacaacgacgaccta
gacatcacgacgattccctataaagataaagccagagaaaccatcaggaaacagaaactg
gaacagtacaaaacaacaggagtttggccaggacacaagcccaagaatattaaaaaagct
acggaaccctggtcattgaccaaacagaaaaaggaggaaagaaaagaaaagagacagaaa
agaaaggaaaagaaacaaattaagatcgcaaataatcagccgttgaaaaagaagaaacgc
aaaggagtaatgagcgaagaagacttggaagaattgaagaaagacgttgcattaatgaaa
aagtttaaaaagaagaaaatctctgacgaagactttgacagagagttttgttcgtaa
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