Aethina tumida (small hive beetle): 109603782
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Entry
109603782 CDS
T06105
Name
(RefSeq) mismatch repair endonuclease PMS2 isoform X2
KO
K10858
DNA mismatch repair protein PMS2
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03430
Mismatch repair
atd03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
109603782
03460 Fanconi anemia pathway
109603782
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atd03400
]
109603782
DNA repair and recombination proteins [BR:
atd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
109603782
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
DacZ_T
Motif
Other DBs
NCBI-GeneID:
109603782
NCBI-ProteinID:
XP_019875837
EnsemblRapid:
ENSATDG00005011856
LinkDB
All DBs
Position
2:join(38042713..38042811,38042861..38043020,38043075..38043420,38043472..38043759,38043812..38044738,38044792..38044892,38044947..38045044,38045097..38045246,38045299..38045361)
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AA seq
743 aa
AA seq
DB search
MDKTENEPEATKAEAKLIQPINRESVHKICSGQVVLSLAIAMKELVENAIDATATRIEVK
LKNYGADLIEVADNGTGIEKENFQTLTMKHYTSKIRQFSDLESLSTLGFRGEALSSLCAL
SNLTIITKHSGASLATKIDYDRNGKIVNESPIARGQGTTVILENLFATLPVRRKEFLKNL
KKEFNKMCNLLYSYCLVSKGIRFSCVNITDVGSKVQVVETEGHKTVKENIISVFGTKQIS
SIIEIPLKFPDDEIIQEYGLKLTVGDELPFDFECLVSSVIHSSGRSTTDRQYYYINSRPC
EPTKLIKLINQTYRQFNGSQYPFVYLNVTTKGTLVDVNVTPDKRQVFLEQEKLLLAIVKS
SLLDAFKLFPSSYKVQNLDVSKKIFVIDKKKDKGLKRRLTDSILKQGSILETFKKRSRTD
PGPSQSFENESLQLSEESDEELERTRDLDHFLELAREYETKPNIENCDIKSEKERSMSDD
EPDIFEVSLDVPVKTTRKIVNVDFSLDDIKKRIREIESKQSYEEDIKIKFRSEVKPEENH
KAEEELTKHINKTDFKRMDIIGQFNKGFIITKLENDLFIVDQHATDEKYNFEQLQLTTIL
DHQKLVNPKPLGLTAGNEAILIENEGIFKKNGFKFIINHDAPTGKKVSLSAIPISKSYLF
GRDDIDEMLFMLQDSNDTLIRPSRVRQMFASRACRKSVMIGKSLTTSDMRKLIDHMGEID
QPWNCPHGRPTMRHLINLNLIQI
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggataaaaccgaaaacgaacctgaagcaacaaaagcagaagccaaactaatacaacca
ataaatcgtgaaagcgttcataaaatatgctcgggacaagttgttttaagtttagcaata
gcaatgaaggaacttgtagaaaacgcaatagacgcaacagcaacaagaattgaagtcaaa
ttaaaaaattatggagctgatttaattgaagtggcagataatggtaccggaattgagaag
gaaaactttcaaactttaactatgaagcattacacgtcgaaaattcgtcaatttagcgat
ttagaaagtttgtcaaccttaggattcagaggtgaagccctgagttctttgtgtgctctt
tcaaatttaaccataataacaaaacattctggcgctagtttggcgaccaaaattgattat
gacagaaatgggaaaattgtgaatgaatctccaatagcaagaggtcaaggcacaactgta
attctagaaaatctgtttgcaactcttccagtcagaagaaaagagtttcttaagaacttg
aaaaaggagttcaataaaatgtgtaatttgctttactcctactgtttggtttctaaggga
ataagattttcttgtgtgaatataacagatgttggctcaaaagttcaggtcgttgaaacg
gaaggacataaaaccgtaaaggaaaacataattagcgttttcggcaccaaacaaatttca
tcaataatcgaaatacctttaaaatttccagacgacgaaataatacaggaatacggcttg
aaattaactgtgggcgatgaattaccatttgattttgaatgtctggtttccagtgtaata
cattcaagcgggagaagtacaaccgatcgacagtattattatataaattcaagaccatgt
gagccaacaaaactcattaaattaataaatcaaacttatagacagtttaatggcagtcaa
tatccctttgtttatttaaatgttactacaaaaggcacacttgttgatgtgaatgttaca
ccagacaaaagacaagtatttttggaacaagaaaaattattacttgcgatcgttaaatcg
tcactgttggatgcatttaagctgtttccttccagctataaagtacaaaatttggatgtt
tcaaagaaaatttttgttattgacaagaagaaggataaaggcttgaaaagacgtttaaca
gattcgattttaaaacaaggaagtatactggaaacatttaaaaaacgttccagaactgat
cctggtcccagccaatcattcgaaaacgaatctttacaactaagcgaagaaagcgatgaa
gaattagaacggacaagagatttggatcattttcttgaactggctagagaatatgaaaca
aaaccaaatatagaaaattgtgatataaaatctgaaaaagaaagaagtatgtctgatgat
gaaccagacatttttgaggtaagcctagatgtccctgttaagacgactaggaagattgta
aatgttgacttttctctggatgatattaaaaaaaggatacgagaaatagagtctaaacaa
tcatatgaagaagacataaaaattaaatttagaagtgaggtaaagccggaagaaaaccat
aaagcggaagaagaattaacaaaacatataaataaaacggattttaaaagaatggatatt
ataggacagttcaataaaggatttataataacaaagttagaaaacgatttatttattgtt
gatcaacatgccacagatgaaaagtacaattttgaacaacttcaattgactaccatattg
gatcatcaaaaattggtcaatccaaaacctttaggattaactgctgggaacgaggcgatt
ttaattgaaaacgaggggatattcaagaaaaatggttttaaatttattattaatcatgac
gcaccaacaggaaaaaaagtatctttatcagcaattccaattagtaaatcatatctattc
ggaagagacgatatagatgaaatgttatttatgctacaagattcaaatgatacgttaata
aggccttcaagagttcgacaaatgttcgcttcgagagcttgtcgaaagtcagtaatgatc
ggaaaatctttaacaacatccgatatgcgaaaacttattgatcacatgggagaaattgat
caaccctggaattgccctcatggaagaccaacaatgagacacctgatcaatttaaatctt
atacaaatttaa
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