Aethina tumida (small hive beetle): 109604081
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Entry
109604081 CDS
T06105
Name
(RefSeq) THO complex subunit 1
KO
K12878
THO complex subunit 1
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd03013
Nucleocytoplasmic transport
atd03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109604081
09122 Translation
03013 Nucleocytoplasmic transport
109604081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
atd03019
]
109604081
03041 Spliceosome [BR:
atd03041
]
109604081
Messenger RNA biogenesis [BR:
atd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
109604081
Spliceosome [BR:
atd03041
]
Complex C
Other components
EJC/TREX
109604081
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
109604081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
109604081
NCBI-ProteinID:
XP_019876177
EnsemblRapid:
ENSATDG00005001127
LinkDB
All DBs
Position
1:complement(join(74277619..74278339,74278394..74278505,74278563..74278735,74278791..74278999,74279060..74279737,74279794..74279832))
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AA seq
643 aa
AA seq
DB search
MDANFDTLRMEYYHVLEKSFKSKDLNIMEDKVKSINRTDMDLKTPLDQTYRTYLLKLLGE
EVPVEKLKEFIQFSIDSCRRGLNGPTLPVILLADIFEALTLDMCKEMFNFVENNVHVLKE
ELFFGACKNHLLRLCNDLLRRLSRSTATVFCGKILLFLAKFFPFSERSGLNIVSEFNFEN
VTEYSKDARDDDYSTEIQGEQNKNIVIDFTFYCKFWQLQDFFRNPTQCYNKIEWKQFCAH
SASILNTFQGIKLDYVNIQENTNQGYFAKYLTSQKLLDLQLYDVNFRRSVLIQFLIVFQY
LTSSVKFKSDSQELKQDQKEWIQIHTEKVYNLLRETPPDGDKFAEIAKKILSREELWNAW
KNEGCPELKKVYDICEKRKSESERPLLGDILKEANKDGRFYMGSGELTRLWNQCPNNLEA
CKCRERDFLPSIEEYFADAILQLESGTPVKDEDNLLKDGNYGWRALRLLARKSSHFFTYS
NTIMNPLSSYLEMMVQKIASEKPGIQENNESQNEAELEESLLNEEDQNTEDLKQDNTEDF
LDDNNPRTETKGMTDAQLQLFSSKVGKDWQKLAAKFGFKPDEIEWLKSEHPTDVDQARHL
LKLWIDEDEDASLDNLLYILEGLEMSEAAEAVRTELGNIMDTS
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggatgccaatttcgatacattacgcatggaatactaccatgtattggaaaaatcattc
aaatcaaaagatctaaacataatggaagacaaagttaaatcgatcaaccgaaccgatatg
gatttaaaaacgcccttggatcagacctacaggacctacctattgaaacttttaggagaa
gaagtgccagttgaaaaactcaaggagttcatccaattttctatagattcatgccggagg
ggcttgaacggtcctactttgcccgtcattttgcttgccgacattttcgaggcgctcacg
ttggatatgtgcaaggagatgtttaattttgttgaaaataatgtgcatgtcttgaaagag
gagttgttcttcggcgcatgcaagaatcatttgttaaggttgtgtaatgatttgttgaga
aggttgtccaggtcgaccgcaaccgttttctgtggcaaaattctattgtttcttgcaaaa
tttttcccgtttagcgaacgatctggcttaaatattgtcagtgagtttaattttgagaat
gttactgaatattctaaagatgccagagatgatgattacagtactgagatacagggtgaa
cagaacaaaaatattgttattgattttacattttactgcaagttctggcagttgcaagac
tttttcaggaaccctactcaatgttataataaaattgaatggaagcagttttgtgctcat
tctgcaagtattttaaatacattccaaggtataaaactggattatgtaaacatacaagag
aacacaaatcagggatactttgcaaaatatttaactagccaaaaattattagatttgcaa
ttatatgatgtaaacttcagaagatcagtcctcatacaattcctcatagtatttcaatat
ctcacatcttcagtcaagttcaaatcggacagtcaagaattgaagcaagaccagaaagag
tggattcaaatacacacagaaaaagtgtacaatcttctgcgagaaacaccaccagatgga
gataaatttgcagaaatcgctaagaaaatactgagcagagaagaattgtggaatgcttgg
aaaaatgaaggatgccctgagttgaaaaaagtttacgacatctgcgagaaacgcaaaagc
gaatcagagaggccacttttaggagacattcttaaagaggccaataaagatggtcgattt
tatatgggaagtggagaattgacaagactttggaatcagtgcccaaacaatttagaagca
tgcaaatgcagagaaagagattttcttccttcaattgaagaatactttgcggatgcaata
ctacaattagaatcgggtactccagttaaagatgaagacaatcttctcaaagatggaaat
tatggttggagggctttgagacttttggccagaaagagttcgcacttcttcacctatagt
aacacaatcatgaatcctttgtcgtcgtatttggagatgatggtgcagaaaattgcctcg
gaaaaacccggaatccaagagaataatgaaagtcaaaatgaagctgaattagaagagagt
ctgctgaacgaagaagaccaaaacacggaagacctaaagcaggacaacactgaagacttc
ctcgacgacaacaacccaaggaccgaaacaaaaggaatgaccgatgcccagttacagttg
tttagctcaaaagttggtaaagactggcaaaaattggcagcgaaattcggtttcaaaccg
gacgaaatcgagtggctaaagagcgaacatccgactgatgtagatcaggcaaggcatttg
ttgaaattatggatcgacgaggatgaggatgcgtctttggataatctgctgtatattttg
gagggactagaaatgagtgaagctgcagaagcagtcagaactgaactagggaatattatg
gatactagttaa
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integrated database retrieval system
