Aethina tumida (small hive beetle): 109606421
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Entry
109606421 CDS
T06105
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
atd
Aethina tumida (small hive beetle)
Pathway
atd04512
ECM-receptor interaction
atd04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
atd00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
109606421
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109606421
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
atd04147
]
109606421
00536 Glycosaminoglycan binding proteins [BR:
atd00536
]
109606421
Exosome [BR:
atd04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
109606421
Glycosaminoglycan binding proteins [BR:
atd00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109606421
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CBM_14
Motif
Other DBs
NCBI-GeneID:
109606421
NCBI-ProteinID:
XP_019878537
EnsemblRapid:
ENSATDG00005008326
LinkDB
All DBs
Position
3:complement(join(16375010..16375134,16375189..16375443,16375506..16376384,16376438..16376947,16377008..16377466,16377515..16377686,16377744..16377772,16378389..16378413))
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AA seq
817 aa
AA seq
DB search
MRIIHLAFVFLLIHGYTFAQQGYKYPPPDIPFPEGGTAPGSTPGYPGSTPQPFPSTTGRP
SIPGSYPGQQPQGPTGGYPGRPSTHFPPSSVGPTGTPGGYPGSTPGYPSGPSSTGFPQPT
TPGYPATTGAPQYGPPTTPRPGFPGQPTGPQQGYPGQPTGPQGYPGQPTGPQPSFPGQPT
GPQQGYPGQPTGPQQGYPGQPTGPQAGYPSGRPQGPGFPTPGGAPSTPGFSPTYPGQPSA
PGYPGAGPTTPGYPGARPTTPGYPGTGPTTPGYPGAGPTTPGYPGAGPTTPGYPGAGQPS
TPGYPGPGQPSTPGYPSTPGFPSTPGYPGAGQPPRPGYPGTGFTPGYPSSPLPTSPGYPQ
PPTGYPSTGQQVGPTGPTTGFPTGVPSYPGQRPSLPGPGGFPGQEPSYPGQGPELQIPGQ
PGRPGVSGGPGRPQGPEGGEGEGEGDFSAIPGQPDIDYPIYATVPETSFRCDQQQFPGYY
ADVETRCQIFHVCANNKTYDFICPNGTIFHQEYLVCVWWNQFDCNSAPSLYGINENIYDY
SIIGAQQPQGPGRYPSPGTTPGGYPGTTPGGFPGSTPGGFPGSLPGGFPGTTPGGFPGTT
PGGLPGTTPGGYPGSTPGTGFPGRPGYPGPSQPTPGYPGTPAPGYPGAATPGYPGAPSPG
YPGAPSPGYPEVSTPGYPGSTPGVPGTGAPGGYPGTGPTGYPSRPGTGPGGYPSTTPTPD
GYPSTTAIGYPGRPGSAPGGYPTVTPPPGRPGGYPGQAGYPSVRPTPGFPSTPGYDGTSG
TPGVTPGYPSTGYPSPGPTGGPGSTLPSREYLPPVGK
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgaggataatacacttagcgtttgtttttcttttaatacacggttacacatttgctcaa
caaggttacaaatacccaccaccagatataccttttcccgaaggaggaacggctccaggt
agtactccaggttatcctggatcaaccccacaaccttttccatcaactactggtagacca
tcaatacccggaagctatccagggcaacaacctcaaggacccactggtggttatccagga
agaccgagcacccacttccctccaagttctgttggccccactggcactccaggtggttat
ccgggttccacccccggatacccatcagggccttcatcgacaggattcccacaaccaact
actcctggatatccagcaaccacaggtgcacctcaatacggtcctccaaccactccaaga
ccgggatttccggggcagccaacaggaccgcaacaaggttatcccggacaaccgactgga
ccacaaggttatccgggacaacctacaggaccccaaccaagtttcccagggcaaccgaca
ggacctcaacaaggttacccaggacaaccaactggaccacaacaggggtatcctgggcaa
cctaccggacctcaggctggttatccgtctggaaggccacaaggacctggatttccaaca
ccaggtggtgccccatcaacaccaggctttagtccaacttatcctggacaaccttcagca
ccaggatatcctggagcaggaccaacgacgccaggctatccaggagcaagaccaaccaca
ccaggctacccaggaacaggaccaaccacaccaggctatccaggagcaggaccaaccaca
ccaggctatccaggagcaggaccaaccacaccaggctatccaggagcagggcaaccatca
acacccggctatccaggtccaggacaaccatctacaccaggatatccttccactccaggg
tttccgtcaactccaggctatcccggagcgggacaacctcctagaccaggttatccaggc
acaggatttactccaggttatccatcgagtcctttgccaacctctcccggatatccacaa
ccacctactggatatccttccactggacaacaagtaggaccaactggtcccactacagga
tttcccactggagtaccttcatatcctggccaaagaccatcattaccaggcccaggtggt
ttccctggtcaagaaccttcgtacccaggacaaggacctgaacttcaaatccccggacag
cccggaagacctggagtatctggaggacctggtagacctcaagggcctgaaggtggggag
ggtgaaggagaaggagatttctctgcaattcctggacaaccggacatagattaccccatt
tatgccacagtgccagaaacgtctttcagatgcgatcaacaacaattccctggttattat
gcagatgtagaaactagatgtcaaatcttccacgtttgcgctaataacaaaacatacgat
ttcatttgtccaaatggtaccatttttcatcaggaatatctcgtatgcgtttggtggaat
caatttgattgtaattccgctccgtcactttacggcatcaacgagaacatctatgactac
tcaataatcggcgcacaacagccccaaggaccaggacgttatccgagcccaggaaccaca
cctggaggatacccaggaacaacacctggaggtttccctggaagtacacccggcggtttc
cctggaagtctacccggtggtttcccaggaactactcccggaggtttccctggaactaca
cccggaggtctaccgggcactactccaggaggatatccgggatccacgcccggtaccgga
ttcccaggcaggccgggttacccaggaccatcgcaacctacaccaggttatccaggaaca
ccggctccgggttatccaggcgctgcaactccgggttatccgggagctccgtccccagga
tatccaggagctccgtctcccggttacccagaagtatcgacacccggatatccaggttca
acaccgggagtaccaggaacgggtgcacccggaggatatccaggaacgggcccaacggga
tacccaagtagacctggcacaggtcctggtggatatccttcaactacacctaccccagac
ggttacccatcgactacagccattggttacccaggaagaccaggatcagccccaggtggt
tatcccactgtaactccaccacctggtagacctggtggataccccggtcaagctggttac
ccatctgttagacccactccaggattccccagcactccaggatatgatggaactagtggt
actcctggtgtaactccgggttacccaagcacaggctatccaagtccaggtccaacaggt
ggacctggatctactttgccatcaagagaatacttgcctccagtcggaaagtga
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