Actinia tenebrosa (Australian red waratah sea anemone): 116305204
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Entry
116305204 CDS
T07455
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116305204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aten03041
]
116305204
Enzymes [BR:
aten01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
116305204
Spliceosome [BR:
aten03041
]
Complex A
U2 snRNP components
U2 related factors
116305204
Complex B
116305204
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
Motif
Other DBs
NCBI-GeneID:
116305204
NCBI-ProteinID:
XP_031570919
UniProt:
A0A6P8IV40
LinkDB
All DBs
Position
Unknown
AA seq
1081 aa
AA seq
DB search
MGRDSRRSRRSTSPSYERRRRSRSTERDKRKRSRSRDRERERNRDRDQERKRDRDRDRDR
ERGKEREKIRGRKRDRRRSKEKNRKRGHSSSSSKSSSSRSRSSSSEKKSRKRRSRSKSLE
RKRRRRSRERKRKSRSRSDSSSKSRSRSRERESKKSKSSKDKRKQDDEEIQDKDKKNKES
EKETSSEAIDKISEQNQLDLEMQKRRERVEAWRAKKKREQEVQDAQKRVQEIRKNKVWSL
EDDEEDDEADNVIDEENKDEEKDDSKDGTNGNVKEEDEDVDPLDAFMATVNSKAHKENPL
AHKKVGKGKATFVTHVVSKKSVVTKSAGKRGELMEVNPDALEYSSEEEKEEEDLEATYSG
YKTKKKKDLQPVDHNKVYYSSFRKDFYVEVPELAKMTPEELDEFRLSLENIQIRGKNCPK
PVKTWAQTGVNLKILDVFKKNGYEKPTPIQAQAIPVIMSGRDMIGIAKTGSGKTLAFLIP
MFRHVKDQPPLDRDDGPIAIIMTPTRELAIQIHRECKKFSKPLNLGAVCVYGGTGISEQI
AELKRGAEIIVCTPGRMIDMLTANSGRVTNCRRCTYLVLDEADRMFDMGFEPQVMRIIDC
IRPDRQTVMFSATFPRQMEALARRILDRPIEIQVGGRSVVCSDVEQHVMVIEEDNKFLKL
LELLGVFQEKGSVLVFVEKQDSADTLFKDLLRRSYPCLSLHGGMDQFDRDSTIADFKNGV
TKLMIATSVAARGLDVKHLNLVVNYDCPNHYEDYVHRVGRTGRAGNKGTSYTFITPEQGR
FAIEIVKALENSEVLVPDELRNLANEYIETQQAEGKQITKTSGFSGKGFKFNEEEVNKVN
EAKKIQKWALGLQDSDDEAEAAEKEVEEIDKRLDAVFSKKPHIKKVVPAVSEAVIKGEQK
AKLNLAASIAAKINQKISAGTNTLDPTQQAASQIIKGGTVTALTGLDLAKQLAEKIHSKL
NYEGPQEEPKEQDQKEVEAERYEDEVEINEFPQTARWKITSKDTIMAITEYSECAVTVRG
TYFPPGKEPKEGERKIYLYIEGPSERAIQLAKVEIKRIVKEELVRLGTFRGPQQTGRYKV
V
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtgatagcagacggagtagaagatccacatccccaagttatgaaagaagaaga
cgctcaagaagtacagaaagagataaaagaaaacggtccagaagtcgcgatagggaaagg
gaaagaaatcgcgacagagaccaagaacgaaaaagagacagagatagagacagagataga
gaacgaggaaaggaaagagaaaaaatcaggggaagaaaaagagatagaagaagatcaaaa
gagaaaaatagaaagagagggcatagtagttcatcaagtaagagttcatcaagtcgaagt
cggagcagcagttctgaaaagaagagcagaaagcgaaggtcgcgcagtaaaagtttagaa
agaaaacgacgccgtcgcagtagggaaaggaaaagaaagtcacgaagcagaagtgacagt
tcttcaaagtcaagatcaagaagtagggagagagaaagcaaaaagtctaaaagcagtaaa
gacaaaagaaaacaggatgacgaggaaattcaagataaagacaaaaagaacaaagagtcc
gaaaaagaaacatcatctgaagctatcgataagatctcagagcaaaaccagcttgacctt
gagatgcagaagagaagggaacgagtagaagcctggagagcaaaaaagaaacgagaacag
gaagtccaggatgctcagaaaagagtacaagaaataagaaagaataaagtatggagtctg
gaagatgacgaggaagatgatgaagctgacaatgttattgatgaggaaaataaagatgaa
gaaaaagatgattcaaaagatgggacaaatggtaatgtgaaggaagaggatgaagacgta
gatcctcttgatgcattcatggctacagtcaatagcaaggctcataaagaaaatcctctt
gcgcataaaaaagttggtaaaggaaaggctacattcgtaactcacgtggtgtccaagaaa
tctgtcgtaacaaaatcagcaggaaagagaggagagttgatggaagtcaatccagacgcc
ttagagtattcatccgaggaagaaaaagaggaagaagacttagaagctacatactctgga
tacaagaccaaaaagaaaaaggatttacaaccagttgaccataacaaggtgtactactca
tcatttagaaaagatttctacgtagaggtccctgaattagccaaaatgactccagaagag
ttggatgaattcagattgagtctagagaacatccaaatcagagggaaaaactgcccaaaa
cctgtcaaaacatgggcacagaccggagtcaatctcaaaatcttggatgttttcaaaaaa
aatggttatgagaaacccacccccatccaggcacaagctattccagtcatcatgtctggt
agagatatgataggaattgccaagactggtagtggtaaaaccttagcttttttaatcccg
atgtttcgacatgtcaaggatcaaccaccattagacagagacgatggtcctatcgcaata
ataatgactcctacgagggaattagcaatccagatacacagagagtgcaaaaagttttct
aaaccattaaacttgggtgccgtgtgtgtttatggtggaacaggaatcagtgaacagata
gcagagctcaaacgcggagcagaaatcattgtgtgtactccaggccgaatgattgacatg
ctgacagctaacagtggtcgtgtgactaactgtagaagatgtacatatttagtacttgac
gaggcagatagaatgttcgatatgggatttgaaccacaggtcatgcgcattatcgactgt
atcagaccggacagacaaaccgttatgttctcggccacctttcctcgtcaaatggaagcc
ctcgccaggagaatcctagatagaccaattgaaattcaagttggtggcagaagtgtcgtc
tgttcagacgttgagcaacatgtgatggtgattgaagaagacaataaattcctgaagctg
ctggaattgttaggggttttccaggagaaaggaagtgtgttggtgttcgtggagaaacag
gattcagctgatacgttgttcaaagatctgctgagaagaagctacccatgcctgtcatta
cacggaggaatggaccagtttgatcgtgacagcacaatagctgacttcaagaatggggtc
accaaactcatgatcgcaacctcggtcgctgcacgagggctggatgtcaaacacctcaac
cttgtagtaaactatgactgtcctaaccattatgaagattatgtacatcgtgttggacga
acaggacgtgccggtaacaaagggacgtcatacacttttatcacccctgaacaaggaaga
tttgctattgaaattgtaaaggcgcttgaaaattctgaagttcttgtccctgatgaactc
agaaaccttgccaatgaatacattgagacccaacaagctgaaggaaaacagatcactaaa
acaagtggattttcaggaaaaggttttaaatttaacgaagaagaagtcaacaaagtcaat
gaggccaagaagatacaaaaatgggctctaggactacaagactcagatgatgaggcagaa
gctgcagagaaagaagtagaagagattgataagcgacttgacgctgtattcagcaagaaa
cctcacatcaagaaggtggtgcctgctgttagtgaagcagtgattaaaggagaacagaaa
gcaaaattaaacctcgctgcgagtatcgctgctaaaatcaaccagaagatcagtgctggc
accaatactttagatcccacacagcaagcagctagtcagatcatcaagggtggaactgtt
actgcactaacgggtcttgatctggcaaaacaactggcggagaagattcacagcaaattg
aactacgaaggaccacaagaagaaccaaaagaacaagatcagaaagaagtagaggctgaa
cgatatgaagacgaggtggaaataaacgaattccctcaaactgctcgatggaaaattact
tctaaggatactatcatggctatcacagagtattctgaatgtgctgttaccgtcagagga
acatacttccctccaggcaaagaacccaaggaaggagaacgaaagatttatctgtatatc
gaaggtccgtctgaacgtgctattcaactcgctaaagtggagatcaaacggattgttaaa
gaagaactcgtacgattgggaacatttcgtggaccccaacagactggaagatacaaagtt
gtctag
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