Actinia tenebrosa (Australian red waratah sea anemone): 116308769
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Entry
116308769 CDS
T07455
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aten
Actinia tenebrosa (Australian red waratah sea anemone)
Pathway
aten03022
Basal transcription factors
aten03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aten00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
116308769
09124 Replication and repair
03420 Nucleotide excision repair
116308769
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aten03021
]
116308769
03400 DNA repair and recombination proteins [BR:
aten03400
]
116308769
Transcription machinery [BR:
aten03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
116308769
DNA repair and recombination proteins [BR:
aten03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
116308769
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
IBR
Motif
Other DBs
NCBI-GeneID:
116308769
NCBI-ProteinID:
XP_031575116
UniProt:
A0A6P8J4X2
LinkDB
All DBs
Position
Unknown
AA seq
372 aa
AA seq
DB search
MADEEEGYRWLNEYEKTWEEIREDNEGSLQSLVDELIHRNKRKRAFSRPGNVRLGMMRHM
YLIIDMSKAMEEADLKPTRLNCTVKLLENFITEYFDQNPISQIGIILTRNKRAEKLTELS
GNPKLHIKALQKACLPKMCQGEPSLQNSLLVAANSLRNSRFLCQSLLQSVVEQNIRCSII
GLAAEMRVCKTICNKTQGKYKVILDEKHYKDLLMEQVTPPAAKADTEAALIRMGFPQHMV
KGPPSLCMCHLDNDYSTKGLNTRGFFCPQCKSKYCDLPVECKVCGLTLVSAPHLARSYQH
LFPFPQYIEEHLTISTEVRKCQACQIILREKSASTCTKCQQTFCLDCDAYIHESLHACPG
CVAKEISQCIDL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaagaagaaggttatcgatggttaaatgaatatgaaaaaacttgggaagaa
atccgagaagataatgaaggatctttgcaaagtttggtggacgagctcatccatcgtaac
aaaagaaagagggctttttcaagaccaggaaatgtcaggcttggcatgatgcgacatatg
tatttaattattgatatgtctaaagcaatggaagaggctgacttgaaaccaacaagacta
aattgtactgtcaagctactagagaattttataacagaatactttgatcaaaatccaata
tcacagattggaataatattaactagaaataaaagagctgaaaagctgacagaattgagt
ggtaacccaaaattacacatcaaagctttgcaaaaagcttgtttacccaagatgtgtcaa
ggagaaccatcactacaaaattcattgttagttgctgcaaactcactaagaaattcaaga
tttttatgtcaatccttgttgcagtctgttgtggaacaaaatattagatgctcaatcatt
ggtctagctgctgaaatgagggtttgtaagacaatttgtaataaaacacaaggaaagtac
aaagtcattcttgatgaaaaacactataaagatctgctaatggaacaggttactccacca
gcagccaaggctgatacagaagcagctttgatcagaatgggtttccctcaacatatggtc
aagggacctccatcactgtgtatgtgtcatttagacaatgactacagtacaaaagggttg
aacacaagaggttttttctgtcctcagtgtaaaagcaagtactgtgatcttcctgttgag
tgtaaagtctgtggtttaaccttagtgtcagcacctcatcttgctcgctcatatcaacac
ttgtttccatttccacaatacatagaagaacatttaacaatcagcacagaagtacggaaa
tgtcaagcatgtcagattattttaagagaaaaatctgcctccacgtgtacaaaatgtcag
cagacgttctgtttggactgtgatgcgtatatccacgagtccttgcatgcctgcccggga
tgtgtagctaaagaaatatcacaatgcatcgacttgtag
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