Agrobacterium tumefaciens Ach5: Ach5_00240
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Entry
Ach5_00240 CDS
T03816
Name
(GenBank) exonuclease RecB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_00240
Enzymes [BR:
atf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ach5_00240
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Ach5_00240
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKC05806
UniProt:
A0AA86KPY7
LinkDB
All DBs
Position
circular:complement(23620..26805)
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AA seq
1061 aa
AA seq
DB search
MTFTHHAKRVLTIAAGTPFLKTLAETLCDGTLTAGYKYDPADPLSLAKVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFEIENPEIMDLAPPISGTGRQIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALGEVIDAMDTEEKEWEALAHLDTGD
HAQWWQLTADFLKIASVFWPARLAELNRTSAGRHRNGILRAEANRLANLPDTGPIIVAGS
TGSIPAAADLIASVASLPQGVVVLPGLDLTMPEEQWEAIAEDPTDPSSRTHSQYGLYMLL
QKLDIMRDDVVQIGAIDSDLEKRAAVFSAALAPAKSTSDWNRWREDKQPGFFDDAFAAAT
LIEAANEREEATAIAVALRLALEAPGAGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATPQAGLTQLALEAILRPGDPVPVISLLKHPLSRFGLSLEAFTKASKALELIAL
RGGRVETEIGNLEAVLDAQLAAQRDDRHPPAWRLALPEGSVDAARDLARRIAVSTEPLGS
AFVRSDRSGRSFTDKLPLSDWAERTGRVIEAICADDNNDLATLWSGEAGDKLSGLFGELM
ESGEILDADGPQWADIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEG
LWPGQTANNPFLSRNMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYSRALRQGSTPAVA
SRWLQRLLALGGEDFAEQLKKRGETYRHWAALMDATIDQEAAKRPAPKPPADLQPKSYSF
SEVGRLRRDPYSIYARRILKLNPLDGFNRDPNAADRGTLYHAIIERYSREGHIPGTPASL
EAMQRILDESFDAEDLPAHVDVIWRPRFEAVARAFIDWEKERHPSIRRSFFEARAGQEIP
EAGIRLTGIADRIDIKTGGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSQTPENLIYVRLRPGTRFFADQVNNEHSNRGGKKAPKSAIELATESIDQLAKFVRSLRD
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgactttcacccatcacgcaaagcgcgtcctgacgatcgctgcgggaacaccgttcctc
aaaacgctcgcggaaacgctgtgtgacgggacactgacagccggctataaatacgaccct
gcggatccgctttcgcttgccaaggtgacgatctatgttccgacccggcgctccgcccgc
gtgctgcgctcagagtttgtcgatcttctgggcggccgttccgccattttgccactgatc
cggccgctcggcgaaaccgatgacgacagcggcttcttcgagatcgaaaatcctgagatc
atggatctggcgccgccgatttccggcaccggccggcaaatcgagctggcgcgcctcatt
ctggcatggcgcaacagcctgcccgacgccatcagggccatccattcggactcaccactt
gtcgcccccgccagccctgccgacgccatatggctggcgcgcgcgcttggcgaagtgatc
gatgcgatggatacggaagaaaaagaatgggaggcgctcgcgcatctcgataccggcgat
cacgcccaatggtggcagctgacggcggatttcctgaaaatcgccagcgtgttctggccc
gcccgtcttgccgaactcaatcgaacttccgcaggccgacatcgcaacggcatcctgagg
gcagaggcgaaccggcttgccaacctgccggacaccggaccaatcatcgttgcgggctcc
acgggctcaattccggcagcagcagaccttatcgcctctgtcgcctccctgccccagggc
gtcgtcgtgcttccgggcctcgatcttacgatgccggaggaacaatgggaggctattgcc
gaggaccctaccgatccttcaagccgcacccattcgcaatacggactctacatgctgttg
cagaagctcgatatcatgcgagacgatgtcgttcagattggcgctatcgatagcgatctt
gaaaaacgcgcggcggttttttcggcagcacttgctcctgccaaatccaccagcgactgg
aaccgctggcgtgaggacaagcaacccggatttttcgacgatgcttttgcggcagcgacc
ctgatagaagctgcaaacgagcgcgaagaggcaaccgcaattgcggtggcgctgcggctg
gcgcttgaagcgccgggcgctggccgcccgtctcaggccgcgctgatcacgcccgatcgc
ggactggccaggcgcgtggcgacggaattgcaacgcttcggtatcgaagccgacgattcc
gccggtacgccgctttccgccacgccgcaggccggactgacgcaactcgcactggaagct
atcctcaggcccggagatccggtgccggtcatttcccttctgaaacatccgctcagccgt
ttcgggctttcgctggaggcttttacaaaagcatcaaaggcgctggaattgatcgcactt
agaggcggccgcgtcgaaacggaaatcggcaatctggaggcggttctcgatgcgcaactg
gcggcgcagcgtgatgaccggcatccgcctgcctggaggctggcactgcccgagggaagc
gtagacgccgcgcgcgatctggcacgccggatcgccgtttcgacagagccgcttggcagc
gcattcgttcgtagcgaccgctcaggccggtctttcacggacaaattgccgctttccgat
tgggccgagcggacgggccgggtgatcgaagccatctgcgcggatgacaacaacgatctt
gccactctctggtccggcgaggcaggcgacaagctttccggcctgtttggcgaattgatg
gaaagcggcgaaatcctggatgcggatggtccgcaatgggctgatatcttcgcggcactg
gtggctggcgaatcgatcaagccgcgatccatgcgccatccgcgcattttcattttcggt
gcccttgaggcacgactgcaaagcgtcgacactgtcgtgatcggcggtctcaatgaaggg
ctttggccgggccagacggcaaacaacccgtttctgtcccgcaacatgaagacagccatc
ggtctggaaccgccggagcggcgcatcggccagctggcgcacgatttcgagatggcgaac
gggacacggcagattttctacagccgcgcgctcagacagggctcgacacccgcagtcgca
tcgcgctggctgcagcgattgctggcactcggcggcgaggattttgccgaacagctgaag
aagcgcggcgagacctatcgccactgggcagccctgatggatgcgaccatcgaccaggaa
gcagcaaagcgccctgcccccaaaccgccggccgacttgcagccgaagagctattccttc
agcgaagtgggcaggctgcgccgtgacccctattcgatctacgcgcggcgtatcctgaag
ctcaacccgcttgatggcttcaaccgcgatcccaatgccgccgaccgtggcacgctctat
catgcaatcattgagcgctattcccgcgaggggcatattcccggcacaccggcatcgctc
gaggccatgcagcgtattctggatgagagtttcgacgcggaagatcttcctgcacatgtc
gatgtcatctggcgcccgcgattcgaggcggtggcacgcgcctttatcgactgggagaaa
gaacgacatccatccatccgccgcagctttttcgaggcgcgtgccggacaggaaatcccc
gaggcaggcataaggctgaccggcatcgccgaccgcatagatatcaagaccggcggtcag
gcggatattatcgactacaaaacggggcttgcgccttcagtcaatcaggcgcgcgcgctg
ctcgacccgcagctcgcgctggaagcggcagcactgatgcggggcgccttccgcgaggcg
ggttcgcagacaccggaaaaccttatctatgtgcgcctgcggccgggtacccgttttttt
gccgaccaggtgaataacgaacactccaaccggggtggcaaaaaagcaccgaaatcggca
attgagctggcaaccgaatcaatcgatcagctggccaagttcgtgcgttcgctgcgtgat
ggcgagaacggttttgcctcgcggctggtgccggaggagcagcagtcctatgggggggaa
tatgaccacctcgcccgcgtttcggaatggtcgacggcagaaccgggagacggcgatgat
gattga
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