Agrobacterium tumefaciens Ach5: Ach5_10270
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Entry
Ach5_10270 CDS
T03816
Symbol
holC
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
atf
Agrobacterium tumefaciens Ach5
Pathway
atf03030
DNA replication
atf03430
Mismatch repair
atf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ach5_10270 (holC)
03430 Mismatch repair
Ach5_10270 (holC)
03440 Homologous recombination
Ach5_10270 (holC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atf03032
]
Ach5_10270 (holC)
03400 DNA repair and recombination proteins [BR:
atf03400
]
Ach5_10270 (holC)
Enzymes [BR:
atf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ach5_10270 (holC)
DNA replication proteins [BR:
atf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ach5_10270 (holC)
DNA repair and recombination proteins [BR:
atf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ach5_10270 (holC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
DUF6164
Motif
Other DBs
NCBI-ProteinID:
AKC06804
UniProt:
A0AA86FW75
LinkDB
All DBs
Position
circular:1055366..1055815
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AA seq
149 aa
AA seq
DB search
MTEILFYHLTESKLEDALPPLLEKSLERGWKVAIQTVDEERRDFLDTHLWTFRDDSFLPH
ATDSSAAPQNQPILLTASNANGNEASVRFLVDGAEPPAVEGYERIVFMFDGYDAYQLEMA
RNHWKRLKTEGHALTYWQQSPEGRWQKKA
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaatcctgttctaccatctgacggaatcgaagctggaggatgcattgccgccc
ttgctcgaaaaatcgctggaacgcggctggaaggtcgcgatccagacggtggacgaggag
cgccgcgatttcctcgacacgcatctgtggacctttcgtgacgacagttttctgccgcac
gcaacggatagctctgccgcgccgcaaaaccagccgattcttttgacggcgtcgaatgcg
aacggtaacgaggcgagtgtccgctttctcgtcgacggtgccgaaccgccggcggtggag
ggctatgagcggatagtgttcatgttcgacggatacgatgcctaccaactggaaatggcg
cggaaccactggaaaaggctgaagaccgaaggtcatgcgctgacctattggcagcaatcg
ccggaaggccgctggcagaagaaagcctga
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