Agrobacterium tumefaciens Ach5: Ach5_47330
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Entry
Ach5_47330 CDS
T03816
Name
(GenBank) LysR family transcriptional regulator
KO
K18900
LysR family transcriptional regulator, regulator for bpeEF and oprC
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_47330
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
atf01504
]
Ach5_47330
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ach5_47330
Antimicrobial resistance genes [BR:
atf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump BpeEF-OprC [MD:
M00698
]
Ach5_47330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
AKC10500
UniProt:
A0AA86KSV3
LinkDB
All DBs
Position
pAt:complement(143252..144193)
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AA seq
313 aa
AA seq
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MDQILAIRTFVRVAEAGSFAKAADTMNLPRSSVSKLVQDLEAHLGTKLVERTTRSVTMTT
EGVAYHERALKLLADLDDMDGTVAGSRSAPKGKLRVDIGSVLANQILIPALSDFQHLYPD
IDLMLGVSDRPADLISEGIDCVIRGGALSDSSMKARKLCELDYVICASPAYLNGLELPER
PEDIEQHRIVSYFSASSGKRFPLRFQHGEERSEYLPASGGVSVNESTAHLNALLSGLGIG
QSFGFLARPHFNSGALVELLPEWKPDNHPLHLVYPADRFPNPRLRAFTEWAAKIFEAVDV
RRNVPAETIHPHG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtggatcagatactcgccattcgaacgtttgtccgcgtcgccgaagccggctctttcgcc
aaggcggcggatacgatgaacctgccccggtcctctgtcagtaaacttgtgcaggatctt
gaggcacatctcgggacaaagctcgtggagcgcaccacgcggtccgtcacgatgaccacc
gaaggcgtcgcctatcacgagcgtgcgctcaagctcctcgccgatctcgatgacatggat
ggcactgtcgccggctcccgcagcgcgcccaaaggaaagctgcgcgtggacatcgggtca
gtgctggcaaatcagatcctcatccccgcgctctccgattttcagcacctgtatcccgat
atcgacctcatgcttggcgtcagcgatcgccccgccgacctcatcagtgaagggatcgat
tgcgtcattcgcggcggggcgctgagtgactcctcgatgaaggcgcgcaagctgtgcgag
ttggactacgtgatttgtgcatcacccgcttatctgaatggcctggagttgccggagcga
ccggaggatatcgagcagcatcggatcgtcagttatttctccgcatcatctggcaagaga
tttccattgcgctttcagcacggcgaagagcgaagcgagtatctcccggcctctggcggc
gtttccgtcaacgagagtaccgcgcatctgaacgcgctgctgtcgggactgggaattggc
caaagcttcggatttctcgcgcggccccatttcaatagcggagcgctggtcgaactgttg
cctgagtggaagccggacaatcatccactgcacctcgtctacccggccgaccgatttcca
aacccgcggctgcgtgcctttacggaatgggcagcgaagatattcgaagccgtcgatgtc
agacgcaatgtgcctgcggagaccatccatccccatggataa
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