Agrobacterium tumefaciens Ach5: Ach5_47340
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Entry
Ach5_47340 CDS
T03816
Name
(GenBank) LysR family transcriptional regulator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
atf
Agrobacterium tumefaciens Ach5
Brite
KEGG Orthology (KO) [BR:
atf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
atf03000
]
Ach5_47340
Transcription factors [BR:
atf03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Ach5_47340
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Fe_dep_repress
HTH_IclR
HTH_Tnp_ISL3
HTH_28
HTH_24
Motif
Other DBs
NCBI-ProteinID:
AKC10501
UniProt:
A0AA86KV08
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Position
pAt:complement(144426..145406)
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AA seq
326 aa
AA seq
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MKFLRRSLPSMNGLFTFEAAARCGSFSRAADELNVTPAAVSRMMSRLEEHLDTTLFLRQP
GGVMLTEPGQLLFDAIARGFAGIESALREIEDRRTGIETVSLSVSTGFTTHWMMPRMAEF
KREFPNVDLRFQLMMGALAGPVNDVDLGMRFVDGPDRHHEAAFVMPEILLPICSPGYRES
HAISGNDIDRVPDTTINLSDAQPNWSTLFTPASGSDPQNSMIFSDYAIVVQAALLGQGVA
LGWLNVVAHWLRTRTLVPAREQLMVTGRRCHLIRLRTKPARPIVTQVKEWMIGELKADVE
AVSALYPNLNIDSVGSDVTINQKQGS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttctccgtcgctccctgccctccatgaacggcctcttcactttcgaggccgct
gcgcgctgcggcagtttttcaagggcagctgacgaattgaacgtaacgccggcggctgtt
agccgcatgatgtcccgactggaggaacatcttgatacgacattgtttcttcggcagccc
ggtggcgtgatgctgaccgaacccggccagctgcttttcgatgcgattgccagaggcttc
gccggaatagaaagcgccttgcgggaaatcgaggatcgccgaaccggtatcgaaaccgtg
tccctttccgtctcgaccggcttcaccacgcactggatgatgccgagaatggccgaattc
aaaagggaatttcccaatgtcgatcttcgttttcagctcatgatgggcgccctggcgggg
ccggtcaacgacgtcgatcttgggatgcgcttcgtagacggaccggacaggcatcacgag
gcagctttcgtcatgcccgaaatcctgctgccgatatgcagtccgggctacagggaaagc
catgccatttccggcaacgatattgatcgcgtgccggatacgacgatcaacctaagcgat
gcgcaacccaactggtcgacgctgttcacaccggccagcggcagcgacccgcagaattcg
atgatcttctccgattacgccatcgtcgtgcaagctgctcttctgggccagggcgtggcg
cttggctggcttaacgtcgtcgcccattggctgcggacacggacactggttccagcgaga
gaacaattgatggtcaccggccggcgctgccatcttatccggctgcgtaccaagcctgcc
cgaccgatcgtcacgcaggtcaaggaatggatgatcggtgaattaaaggcagacgtcgaa
gcggtgagcgcgctttatccgaatttgaatatcgattcagtgggttccgacgtaaccatc
aatcaaaaacaaggctcttaa
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