Arabidopsis thaliana (thale cress): AT1G16610
Help
Entry
AT1G16610 CDS
T00041
Symbol
SR45
Name
(RefSeq) arginine/serine-rich 45
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03013
Nucleocytoplasmic transport
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
AT1G16610 (SR45)
03015 mRNA surveillance pathway
AT1G16610 (SR45)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G16610 (SR45)
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
AT1G16610 (SR45)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
Motif
Other DBs
NCBI-GeneID:
838230
NCBI-ProteinID:
NP_173107
TAIR:
AT1G16610
UniProt:
Q9SEE9
LinkDB
All DBs
Position
1:complement(5675495..5678873)
Genome browser
AA seq
414 aa
AA seq
DB search
MAKPSRGRRSPSVSGSSSRSSSRSRSGSSPSRSISRSRSRSRSLSSSSSPSRSVSSGSRS
PPRRGKSPAGPARRGRSPPPPPSKGASSPSKKAVQESLVLHVDSLSRNVNEAHLKEIFGN
FGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEKAQLYMDGAQIDGKVVKATFTLPPRQK
VSSPPKPVSAAPKRDAPKSDNAAADAEKDGGPRRPRETSPQRKTGLSPRRRSPLPRRGLS
PRRRSPDSPHRRRPGSPIRRRGDTPPRRRPASPSRGRSPSSPPPRRYRSPPRGSPRRIRG
SPVRRRSPLPLRRRSPPPRRLRSPPRRSPIRRRSRSPIRRPGRSRSSSISPRKGRGPAGR
RGRSSSYSSSPSPRRIPRKISRSRSPKRPLRGKRSSSNSSSSSSPPPPPPPRKT
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaccaagtcgtggccgtcgttccccctccgtgtctggctcgtcatctcgttcc
agttccagatctcgttcgggttcgagcccctccaggtctatttcccgctcacgctcccgt
tctagatcgctctcttcatcttcatctccttcgcgaagcgtcagttctgggagtcgcagt
cctccacgtcgtggaaaaagtcctgctggacctgctaggcgaggtcgctctcctcctcct
ccaccatctaaaggagcatcttcaccttccaagaaagctgttcaagaatctcttgttctc
catgttgattctcttagcaggaatgtgaatgaagcccatctcaaagaaatctttggcaac
tttggtgaagttatacatgtcgaaattgcgatggatcgagctgttaatcttccaagagga
catggttatgttgagttcaaggcaagagctgatgctgagaaagctcagctctacatggat
ggtgcccaaattgatggaaaggttgttaaagcaacgttcacactaccacctcgtcagaaa
gtatcttcaccccctaaacctgtctcagctgcaccaaaaagagatgctccaaaatctgat
aatgctgctgctgacgctgagaaagatggtggtcccaggcgcccaagagagacatctcct
caacggaaaacagggctttctccgagaaggcgatcacctctacctaggagaggcttatca
cctagaaggcgatcacctgattctccccatcgccggaggccgggctctcctatccgccgt
cgcggtgatacacctcctagacgtaggccagcatcaccatctagaggccgttctccatct
tctccccctccaagacgatatagatctcctccaaggggctcccctagaagaattcgtggc
agtcctgttcgaagaaggtctcctcttcctctaagacgaaggtctccacctccaaggaga
ctacgcagtcctcccagaagatctccaatccgtaggcgtagccgatccccaattcgtagg
cctggtcgctctcgttcaagttccatctcaccccgcaagggacgaggtccagctgggaga
cgtgggaggtcatcttcttactctagttcaccaagtcccagaaggattcctaggaagatt
tcaaggagccgcagtcctaagaggccactgagaggaaaaagaagcagcagtaacagcagc
agcagcagttcaccgccaccaccacctccacctcgtaaaacttaa
DBGET
integrated database retrieval system
