Arabidopsis thaliana (thale cress): AT1G20920
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Entry
AT1G20920 CDS
T00041
Name
(RefSeq) P-loop containing nucleoside triphosphate hydrolases superfamily protein
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
AT1G20920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ath03041
]
AT1G20920
Enzymes [BR:
ath01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AT1G20920
Spliceosome [BR:
ath03041
]
Complex A
U2 snRNP components
U2 related factors
AT1G20920
Complex B
AT1G20920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
838685
NCBI-ProteinID:
NP_001322012
TAIR:
AT1G20920
UniProt:
Q8H0U8
LinkDB
All DBs
Position
1:7285042..7289943
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AA seq
1166 aa
AA seq
DB search
MEVEKSKYRSEDLDVVEEEADLKKSRRDRDRSNERKKDKGSEKRREKDRRKKRVKSSDSE
DDYDRDDDEEREKRKEKERERRRRDKDRVKRRSERRKSSDSEDDVEEEDERDKRRVNEKE
RGHREHERDRGKDRKRDREREERKDKEREREKDRERREREREEREKERVKERERREREDG
ERDRREREKERGSRRNRERERSREVGNEESDDDVKRDLKRRRKEGGERKEKEREKSVGRS
SRHEDSPKRKSVEDNGEKKEKKTREEELEDEQKKLDEEVEKRRRRVQEWQELKRKKEEAE
SESKGDADGNEPKAGKAWTLEGESDDEEGHPEEKSETEMDVDEETKPENDGDAKMVDLEN
ETAATVSESGGDGAVDEEEIDPLDAFMNTMVLPEVEKFCNGAPPPAVNDGTLDSKMNGKE
SGDRPKKGFNKALGRIIQGEDSDSDYSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVD
HSKIEYEPFRKNFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRPIKFWHQTGLTSKI
LDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIKDQPPVEAG
DGPIGLVMAPTRELVQQIHSDIRKFSKPLGIRCVPVYGGSGVAQQISELKRGTEIVVCTP
GRMIDILCTSSGKITNLRRVTFLVMDEADRMFDMGFEPQITRIIQNIRPERQTVLFSATF
PRQVETLARKVLNKPVEIQVGGRSVVNKDITQLVEVRPESDRFLRLLELLGEWSEKGKIL
VFVQSQEKCDALYRDMIKSSYPCLSLHGGKDQTDRESTISDFKNDVCNLLIATSVAARGL
DVKELELVVNFDAPNHYEDYVHRVGRTGRAGRKGCAVTFISEDDAKYAPDLVKALELSEQ
PVPDDLKALADGFMVKVKQGIEQAHGTGYGGSGFKFNEEEEEVRKAAKKAQAKEYGFEED
KSDSEDENDVVRKAGGGEISQQQATFAQIAAIAAAAKAAAAAPVSAPVTANQLLANGGGL
AAMPGVLPVTVPTLPSEGAGRAAAMVAAMNLQHNLAKIQADAMPEHYEAELEINDFPQNA
RWKVTHKETLGPISEWTGAAITTRGQFYPTGRIPGPGERKLYLFIEGPSEKSVKHAKAEL
KRVLEDITNQAMSSLPGGASGRYSVL
NT seq
3501 nt
NT seq
+upstream
nt +downstream
nt
atggaggtagagaaatccaagtataggagcgaagatttggatgtggtggaggaggaggct
gatttgaagaagagtcggcgagatcgtgatcggagtaatgagcggaagaaggataagggt
tcagagaagcgtcgagagaaggataggcggaagaaacgagttaagagtagtgattctgaa
gatgattacgatagagatgatgatgaagagagggagaagcgtaaggagaaggagagggag
cggagacggagggataaggatagggtgaagagacggtctgagagaaggaagagtagtgat
tctgaagatgacgttgaagaagaggatgagagggataaacgcagagtgaatgagaaggag
agagggcatcgagaacatgagagagatagaggcaaagataggaaaagggatagagagagg
gaagagaggaaggataaagaaagagaaagggagaaggatagagagaggagagaacgggaa
cgggaagagcgggagaaggagagagttaaagaaagagaaaggcgggaacgggaagatgga
gagagggataggagagagcgtgagaaagaaaggggtagtaggaggaaccgggaaagggaa
aggtcaagagaggtgggcaatgaagagagtgatgatgatgtcaagcgtgacttgaaacgt
agaagaaaagagggcggtgaacggaaggagaaagagcgtgaaaagagtgttggcagatct
agcaggcatgaagatagtccaaagagaaagagtgtcgaggataatggggaaaagaaagag
aagaaaacgcgagaagaagaactagaggatgagcagaagaagttggatgaggaagtggaa
aaacgaaggagaagagtccaggagtggcaagaattgaagaggaagaaggaggaagctgaa
agtgaaagtaagggtgatgcggatggtaatgagcccaaggccggtaaggcttggactctt
gaaggagaatctgatgatgaagaaggccatccggaagaaaaatcagaaacagaaatggat
gttgatgaagagactaaacctgaaaatgatggagatgctaagatggtagacttggagaat
gagacagctgctactgtctctgagagtggaggtgatggagctgtagatgaagaggaaatt
gatcctttagatgcttttatgaatactatggtattacctgaggttgagaagttttgcaat
ggtgctcctcccccagcagtgaacgatggtactttggattctaaaatgaatgggaaggaa
agtggtgaccggccaaagaaaggttttaataaggcccttggtaggataattcaaggtgaa
gattctgattctgattattcagaaccaaagaatgatgatgatccaagtttagacgaagac
gatgaggagttcatgaagagagtaaagaagacaaaagctgagaagttgtcccttgttgac
cactcaaaaatagagtatgaacctttccggaagaacttctatatcgaagtgaaggatatc
tctaggatgacacaagaagaagttaacacttacagaaaggaattggagctgaaagttcat
ggaaaggatgttccaagacccataaagttttggcaccagactgggctaaccagcaaaatt
ttggatactatgaagaagcttaattatgaaaagccaatgcctattcaaacacaagcactc
cctatcatcatgagcggtcgagactgcattggggttgcaaaaaccggttcaggtaaaacc
cttggttttgttttgccaatgctgaggcatattaaagatcagcctcccgttgaagctggt
gatgggccaattggtcttgtaatggcacctactagggagcttgttcagcagattcacagc
gatatcagaaagttttctaagccattgggtataagatgcgtccctgtgtatggaggatca
ggagttgcccagcaaattagtgaacttaagcgaggtactgagattgttgtgtgcactcct
gggagaatgattgatatcctttgcacaagcagtgggaaaatcactaatctgcgaagagtc
acatttttggtaatggatgaagctgatcgtatgtttgacatgggttttgagcctcaaatt
actcgtattattcagaacattcgaccggaacgccaaactgtgcttttttctgccactttt
ccacgccaagttgaaactttggcacgtaaagtcttgaacaagcctgtagaaatacaggtc
ggtggaaggagtgttgtgaataaggatataactcagttagttgaagtcagaccggagagt
gataggttccttagacttctggaacttcttggggaatggtctgagaaagggaaaattctg
gtctttgttcagtcgcaggaaaaatgtgatgccttgtatagggatatgattaaatctagt
tacccttgtctgtctcttcacgggggtaaggatcagaccgatcgtgaatcaactatatct
gattttaagaacgatgtctgcaatttgttgattgccacaagtgttgctgctaggggtcta
gatgtgaaagagcttgagttggttgtaaactttgatgcgccgaaccactatgaagattat
gtgcatcgcgttggcaggacaggcagggcagggcgtaagggctgtgctgtgacatttatc
tccgaggatgatgcaaaatatgcaccagatttagtcaaggccctggagctttctgagcag
ccagttcctgatgatctgaaagcacttgctgatggtttcatggtgaaagtgaaacagggt
attgagcaagctcatggaactggctatggtggtagtggctttaaattcaacgaagaggag
gaagaagttagaaaagcagcaaagaaagcacaagcaaaggagtatggctttgaggaagac
aagtctgactcagaagatgagaatgatgtagtaagaaaggcaggtggtggtgagatctca
cagcagcaggctacttttgctcagatagccgccattgctgctgctgccaaagctgctgct
gctgctccagtgagtgctcctgtgacagctaaccaattactggcaaatggtggcgggctt
gctgccatgccaggtgtccttccggttactgttcctacccttcctagtgaaggggcaggc
cgtgctgcagccatggttgctgccatgaatctgcaacataatctggcaaagattcaagct
gatgcaatgcctgagcactatgaagcagaacttgaaatcaatgacttcccacaaaatgct
cgttggaaggtcacccataaagaaactttgggtccaatatcagagtggactggagctgct
attaccaccaggggtcagttttatcctacaggacgtataccgggacctggggaacggaag
ctgtacttattcattgaagggcctagcgaaaaatcagttaagcacgcaaaagctgaactc
aagcgtgttcttgaagacattacgaatcaggccatgtcctcacttcctggaggagcatcc
gggagatactcagtcctttaa
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