Arabidopsis thaliana (thale cress): AT1G27940
Help
Entry
AT1G27940 CDS
T00041
Symbol
ABCB13
Name
(RefSeq) P-glycoprotein 13
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AT1G27940 (ABCB13)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ath02000
]
AT1G27940 (ABCB13)
04147 Exosome [BR:
ath04147
]
AT1G27940 (ABCB13)
04090 CD molecules [BR:
ath04090
]
AT1G27940 (ABCB13)
Enzymes [BR:
ath01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
AT1G27940 (ABCB13)
Transporters [BR:
ath02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
AT1G27940 (ABCB13)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AT1G27940 (ABCB13)
CD molecules [BR:
ath04090
]
Proteins
AT1G27940 (ABCB13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_16
AAA_29
AAA_22
ABC_ATPase
Zeta_toxin
RsgA_GTPase
AAA_21
AAA_7
nSTAND1
AAA
DEAD
AAA_30
P-loop_TraG
Mg_chelatase
AAA_15
APS_kinase
AAA_23
SpoIVA_ATPase
DUF87
Motif
Other DBs
NCBI-GeneID:
839687
NCBI-ProteinID:
NP_174115
TAIR:
AT1G27940
UniProt:
Q9C7F8
A0A178W4F4
LinkDB
All DBs
Position
1:complement(9733430..9738236)
Genome browser
AA seq
1245 aa
AA seq
DB search
MDNTERSSNGNIQAETEAKEEKKNIKKESVSLMGLFSAADKLDYFLMLLGGLGACIHGAT
LPLFFVFFGKMLDSLGNLSTDPKAISSRVSQNALYLVYLGLVNFVSAWIGVSCWMQTGER
QTARLRINYLKSILAKDITFFDTEARDSNLIFHISSDAILVQDAIGDKTDHVLRYLSQFI
AGFVIGFLSVWQLTLLTLGVVPLIAIAGGGYAIVMSTISEKSETAYADAGKVAEEVMSQV
RTVYAFVGEEKAVKSYSNSLKKALKLGKRSGLAKGLGVGLTYSLLFCAWALLLWYASLLV
RHGKTNGAKAFTTILNVIFSGFALGQAAPSLSAIAKGRVAAANIFRMIGNNNSESSQRLD
EGTTLQNVAGRIEFQKVSFAYPSRPNMVFENLSFTIRSGKTFAFVGPSGSGKSTIISMVQ
RFYEPNSGEILLDGNDIKSLKLKWFREQLGLVSQEPALFATTIASNILLGKENANMDQII
EAAKAANADSFIKSLPNGYNTQVGEGGTQLSGGQKQRIAIARAVLRNPKILLLDEATSAL
DAESEKIVQQALDNVMEKRTTIVVAHRLSTIRNVDKIVVLRDGQVRETGSHSELMLRGGD
YATLVNCQETEPQENSRSIMSETCKSQAGSSSSRRVSSSRRTSSFRVDQEKTKNDDSKKD
FSSSSMIWELIKLNSPEWPYALLGSIGAVLAGAQTPLFSMGIAYVLTAFYSPFPNVIKRD
VEKVAIIFAGAGIVTAPIYLLQHYFYTLMGERLTSRVRLSLFSAILSNEIGWFDLDENNT
GSLTSILAADATLVRSALADRLSTIVQNLSLTVTALALAFFYSWRVAAVVTACFPLLIAA
SLTEQLFLKGFGGDYTRAYSRATSVAREAIANIRTVAAYGAEKQISEQFTCELSKPTKNA
FVRGHISGFGYGLSQFLAFCSYALGLWYVSVLINHKETNFGDSIKSFMVLIVTAFSVSET
LALTPDIVKGTQALGSVFRVLHRETKISPDQPNSRMVSQVKGDIEFRNVSFVYPTRPEID
IFKNLNLRVSAGKSLAVVGPSGSGKSTVIGLIMRFYDPSNGNLCIDGQDIKTLNLRSLRK
KLALVQQEPALFSTTIYENIKYGNENASEAEIMEAAKAANAHEFIIKMEEGYKTHAGDKG
VQLSGGQKQRVAIARAVLKDPSVLLLDEATSALDTSSEKLVQEALDKLMKGRTTVLVAHR
LSTIRKADTVAVLHKGRVVEKGSHRELVSIPNGFYKQLTSLQEVL
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggataacacagaaagatcctctaatggaaacatccaagccgagacggaagcaaaggag
gagaagaaaaatataaagaaggaatcagtgtcattgatgggtttgtttagcgcagcagat
aaacttgattactttctcatgttgctaggaggtttaggtgcgtgtatacatggcgctacg
cttcctctcttcttcgtgttcttcggaaaaatgctagattctcttggaaatctttctaca
gatcctaaagccatatcttcccgcgtttcacagaatgctctgtacttggtctacttagga
ttggtcaattttgtatcagcttggatcggagtttcttgttggatgcaaacaggggaaaga
caaacagcacgattgcgtataaattatctcaaatcgatattagcaaaagacattactttc
tttgatactgaagctagagattcaaatctcatttttcacatatcaagcgatgctatcttg
gttcaagatgcaattggcgataagaccgaccatgttttgcggtatctatctcagtttata
gcgggatttgtcattggttttttgtcggtatggcaactaacgctgctcacgttaggagtg
gttccactgatagctattgcaggaggagggtatgctatagtcatgtctacaatctcagag
aagagtgagactgcttatgctgatgcaggaaaagtcgcagaagaggttatgtcacaggtg
agaacagtgtatgcttttgtaggagaagagaaagctgtaaaatcttactcaaattctctc
aagaaagctctgaaactcggtaaaaggagcggtcttgctaaaggtttaggagttggatta
acatatagcctcttgttctgtgcttgggctttgcttttgtggtatgcaagtcttcttgta
cgccacggcaaaaccaatggtgcaaaagccttcacaaccatcctcaatgtcattttcagt
ggattcgccttaggtcaagccgcacctagcttatccgcgattgctaagggtagagttgct
gctgcaaacatattcagaatgatagggaacaacaattctgaaagttctcaaagattagac
gagggaacaacattgcaaaatgtagctgggaggattgagtttcaaaaagtgtctttcgca
tatccttctagaccaaacatggtttttgagaatcttagtttcacaatacggtcaggcaag
acttttgcatttgtcggtccaagtggttcagggaaaagcacaatcatatcaatggttcaa
cgtttctatgaacctaactcaggggagattctcttagatggaaatgacatcaagagccta
aagcttaaatggtttagagaacagcttggattagtgagtcaagaaccagcattattcgcc
acaacaatagcttccaatattcttttaggtaaagagaatgcgaatatggatcagatcata
gaagctgctaaagcagctaatgctgattctttcattaaatcattacctaatggttacaat
actcaggttggagaaggaggaactcaactctcaggaggacagaaacagaggattgcaatt
gctcgagcagttctaagaaatccaaagatattacttttagatgaagcaacaagcgctctt
gatgccgaatcagagaagattgttcagcaagcacttgacaatgtcatggaaaaaagaaca
acaatcgtcgttgcacatagattatccaccattcgaaatgttgacaagattgttgtcttg
agagatggtcaagttagggaaaccggaagccactcagaactcatgttaagaggaggagat
tatgcgactcttgtcaattgccaagagacagaacctcaagaaaactcgagatcaattatg
tctgaaacttgtaaatctcaagctggatcttctagttcaagaagagtttctagctcaagg
aggacttcaagcttcagggtagaccaagagaagactaaaaatgatgattccaaaaaagac
tttagctcttcttcgatgatatgggaacttataaagttgaattctccagaatggccatat
gcattacttggctccattggtgcagtacttgctggagcacaaactccattgttctctatg
gggattgcttatgtgttaactgcattttattcgccttttcctaatgtgatcaagcgcgac
gtagaaaaggtagctattatctttgctggagctggaatagtaactgcacctatatatctt
ctccaacattacttctatacactaatgggagagcgtcttacttctagggttcgcttatcc
ttgttctcagcgattctttcaaatgagattggatggtttgatctggatgagaacaacact
ggctcacttacttcaatcttagctgctgatgcaactttggtgaggagtgctctagcggat
cgcctctcgacaatagtccaaaacttgtctcttacagtcactgcattggcacttgccttt
ttctatagttggcgtgttgcagctgtggtaacggcttgtttccctcttctcattgcggct
tcacttaccgagcaactatttttaaaaggctttggaggagattacacaagagcttactct
agggcaacttcagtggcacgtgaagcgattgcaaatataagaactgtcgctgcatatggt
gccgaaaagcagatctcggaacagtttacttgtgagctaagcaagcccaccaagaatgcc
tttgtcagaggtcatatctctggatttggatacggtttgtctcagtttcttgcgttctgt
tcctacgctcttggtctctggtacgtatcggttttgatcaatcataaggagacgaatttt
ggggatagtatcaaatccttcatggtgttgatcgtcacagctttctcagtttcggaaacg
cttgctttgaccccagatatcgtgaagggcacgcaagcactcgggtcagttttcagggtt
ttacatagagagaccaagatatctccagaccagcctaactcaagaatggttagtcaagtc
aaaggagatatagagtttagaaacgtgagttttgtgtatcccacaagacccgaaattgac
attttcaaaaacctaaacctccgagtttcagccgggaaaagtcttgcggtcgtaggacct
agtggttcgggaaagagcacggtgatcggactgatcatgagattctacgatccgagcaac
ggcaatctttgcatcgatgggcaagacataaaaaccctaaacttacgtagcttgcgcaag
aagctagcgctagttcaacaagaaccggctctcttttcaacaaccatatacgaaaacatt
aagtatggcaatgaaaacgcatcggaggcagagatcatggaagctgcgaaagcggcgaat
gcgcacgagttcattatcaagatggaagaagggtacaaaacgcacgcgggtgataaggga
gtacaattatcaggtgggcagaaacagagagtggctatcgcgagggcggttttaaaggac
ccttcagtgcttctccttgatgaggcaacaagtgctctggacacgagctcggagaaacta
gtccaagaggcgctagacaagctaatgaagggacgaacgacggtattggtggctcatagg
ctgtcgaccataagaaaagcagatacggtcgctgtgttgcataagggaagggttgtagag
aaaggaagtcatagagagcttgtttcaatacctaatgggttttataagcaattgacgagt
cttcaagaagtactgtga
DBGET
integrated database retrieval system
