Arabidopsis thaliana (thale cress): AT1G66500
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Entry
AT1G66500 CDS
T00041
Name
(RefSeq) Pre-mRNA cleavage complex II
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
AT1G66500
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT1G66500
03019 Messenger RNA biogenesis [BR:
ath03019
]
AT1G66500
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
AT1G66500
Messenger RNA biogenesis [BR:
ath03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
AT1G66500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
842968
NCBI-ProteinID:
NP_176823
TAIR:
AT1G66500
UniProt:
Q9C710
A0A654ELL5
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Position
1:complement(24811080..24812661)
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AA seq
416 aa
AA seq
DB search
MASNGSFSAQRNANARTTMKRRSDNRGYGGGIGGYQEETNRYAPPQKRFRSQAQQQFRSG
HNPLYHHHGSNNNNVSRVSSQSYNNCGVDVIASNSSFALRNNDSNTNNYQKPFVAGYGNP
NPQIVPLPLPYRKLDDNLSLDSLPDWVPNSRTLTPNYPVRSSNFVPNTPVFTNVQNPMNH
SNMVSVVSQSMHQPIVLSKELTDLLSLLNNEKEKKTLEASNSDSLPVGLSFDNPSSLNVR
HESVIKSLYSDMPRQCSSCGLRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWL
ASASLWLCAATGGETVEVASFGGEMQKKKGKDEEPKQLMVPADEDQKNCALCVEPFEEFF
SHEDDDWMYKDAVYLTKNGRIVHVKCMPEPRPAKDLREPSRVMSVTVPSVAKAIAC
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaaacggatctttctctgctcagagaaacgcaaacgctagaacaacgatgaag
agaagaagcgacaatcgcggttacggtggcggaatcggaggttatcaagaggagacgaac
cgttacgcgccgccgcaaaaacgtttcagatcacaagcgcaacagcaattccgatctggt
cataatcctctgtatcatcatcatggtagtaataataataacgtgtctagggtttcttct
caatcatataacaattgcggtgttgatgtgattgcttctaattcaagttttgcattacgt
aacaatgattctaacaccaacaattatcagaaaccctttgttgctggttatggaaaccct
aatccccaaattgttcctcttccattaccttatcgtaagcttgatgacaatctctcttta
gattcgttacctgattgggttccgaattcaagaaccctaactccgaattatcctgttagg
tcatcgaattttgtaccaaacactcctgtttttacgaatgttcaaaatccgatgaatcat
tcgaacatggtttcagttgtgtctcaatctatgcatcaaccaattgttttgagcaaagaa
ttgactgatttgcttagtcttcttaacaatgagaaagagaagaaaactttagaagcaagt
aatagtgattctttgcctgttggattaagctttgataatccatcgtcacttaatgttcga
catgaatctgtgattaagtctctgtattctgatatgccgagacaatgttcatcgtgtggg
ttgagattcaagtgtcaagaagagcatagtaaacacatggattggcatgtaaggaagaac
aggtcggtgaaaaccactacaagactgggtcagcaaccgaagaaatcgaggggatggtta
gcaagtgcatctttatggctttgtgcagcgacgggaggagagacggtagaagtagcatct
tttggaggagaaatgcagaagaagaaaggaaaggacgaagaaccaaaacaactcatggtg
cctgcggatgaagatcagaagaattgcgcattatgcgtagagccgtttgaagagttcttt
agccatgaagatgatgattggatgtataaagatgcagtctacttaaccaagaatggtcgt
atagttcatgttaagtgtatgcctgaaccccgacctgctaaggatttgagagagccttcg
agggtaatgtctgttacagttccatcggttgcgaaagctatagcctgctga
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