Arabidopsis thaliana (thale cress): AT2G39480
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Entry
AT2G39480 CDS
T00041
Symbol
ABCB6
Name
(RefSeq) P-glycoprotein 6
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
AT2G39480 (ABCB6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ath02000
]
AT2G39480 (ABCB6)
04147 Exosome [BR:
ath04147
]
AT2G39480 (ABCB6)
04090 CD molecules [BR:
ath04090
]
AT2G39480 (ABCB6)
Enzymes [BR:
ath01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
AT2G39480 (ABCB6)
Transporters [BR:
ath02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
AT2G39480 (ABCB6)
Exosome [BR:
ath04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
AT2G39480 (ABCB6)
CD molecules [BR:
ath04090
]
Proteins
AT2G39480 (ABCB6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_29
AAA_21
Zeta_toxin
AAA_16
AAA_15
RsgA_GTPase
AAA_30
DUF87
Motif
Other DBs
NCBI-GeneID:
818533
NCBI-ProteinID:
NP_181480
TAIR:
AT2G39480
UniProt:
Q8LPT1
LinkDB
All DBs
Position
2:complement(16477792..16485039)
Genome browser
AA seq
1407 aa
AA seq
DB search
MMISRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDPGAEHGGTGTAAQADDEEEMEEPE
EMEPPPAAVPFSQLFACADRFDWVLMVFGSVAAAAHGTALIVYLHYFAKIVQVLAFPTDS
DHLISDDQFNRLLELSLTIVYIAGGVFISGWIEVSCWILTGERQTAVIRSKYVQVLLNQD
MSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFISGLIIGFVNCWEIALIT
LATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYVRTLYAFTNETLAKYSYA
TSLQATLRYGILISLVQGLGLGFTYGLAICSCAMQLWIGRFFVIHHRANGGEIITALFAV
ILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSGTNQEGIILSAVQGNIEFRNVYFS
YLSRPEIPILSGFYLTVPAKKAVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKN
LKLEWLRSQIGLVTQEPALLSLSIRENIAYGRDATLDQIEEAAKKAHAHTFISSLEKGYE
TQVGKTGLTLTEEQKIKLSIARAVLLDPTILLLDEVTGGLDFEAERVVQEALDLLMLGRS
TIIIARRLSLIRNADYIAVMEEGQLLEMGTHDELINLGNLYAELLKCEEATKLPRRMPVR
NYNDSAAFQAERDSSAGRGFQEPSSPKMAKSPSLQRGHNVFRSQELCFNSEESPNDHSPA
PEKLGENGSSLDVGEKEPTIKRQDSFEMRLPELPKIDIQCPQRQKSNGSDPESPISPLLI
SDPQNERSHSQTFSRPLGHSDDTSASVKVAKDGQHKEPPSFWRLAQLSFPEWLYAVLGSI
GAAIFGSFNPLLAYVIALVVTTYYTSKGSHLREEVDKWCLIIACMGIVTVVANFLQHFYF
GIMGEKMTERVRRMMFSAMLRNEVGWYDEEENSPDTLSMRLANDATFVRAAFSNRLSIFI
QDSFAVIVAILIGLLLGWRLALVALATLPVLTLSAIAQKLWLAGFSKGIQEMHRKASLVL
EDAVRNIYTVVAFCAGNKVMELYRLQLQRILRQSFFHGMAIGFAFGFSQFLLFACNALLL
WYTALSVDRRYMKLSTALTEYMVFSFATFALVEPFGLAPYILKRRRSLASVFEIIDRVPT
IEPDDTSALSPPNVYGSIELKNIDFCYPTRPEVLVLSNFSLKVNGGQTVAVVGVSGSGKS
TIISLIERYYDPVAGQVLLDGRDLKSYNLRWLRSHMGLIQQEPIIFSTTIRENIIYARHN
ASEAEMKEAARIANAHHFISSLPHGYDTHIGMRGVELTQGQKQRIAIARVVLKNAPILLI
DEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGKIVEEGTHD
CLAGKNGLYVRLMQPHFGKNLRRHQLI
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgatgatttcgagaggtttgtttggttggtctccgccgcatatacaaccgttaactcct
gtttctgaagtttccgagcctcctgagtctccatctccttaccttgatcctggtgctgag
cacggtggtacaggaacagcggcgcaagcggatgatgaggaggaaatggaggagccggag
gagatggagcctcctcctgctgctgttcctttctctcagctatttgcttgtgctgatcgc
tttgattgggttcttatggtttttggatccgttgctgctgctgctcatggtactgcgctt
attgtttacttgcactacttcgccaaaattgttcaggttcttgcatttcccactgattcg
gatcatctgataagtgatgatcagttcaatcgtctcctcgagctttcgctgaccattgta
tatatcgctggaggtgttttcatatctggttggattgaggtgtcttgctggatactgact
ggagagaggcagactgctgtgatcaggtcaaagtacgtccaagtgctactaaatcaggat
atgagtttctttgatacatatgggaataacggggatatagtaagccaagtactgagtgat
gttctacttattcagtcggctctaagtgaaaaagttgggaattacattcataacatggcg
acatttatcagtggtcttattattggttttgtcaactgctgggaaattgccctcattacg
ttagccaccggtcctttcattgttgctgctggaggcatatcaaatatatttctccacaga
cttgctgagaatattcaagatgcatatgctgaagcagccagcattgctgaacaggcagtc
tcttatgttaggactttgtatgcctttacaaatgaaactcttgcaaaatactcttatgca
acttctctccaagcaactctgagatatggtatattgattagtcttgtgcaaggacttgga
cttggatttacttatgggcttgctatatgttcatgtgctatgcaactttggattggtcgg
ttctttgttattcatcatagagcaaatggtggagagatcataacagccctttttgctgtt
attttaagtgggctgggtttaaatcaagcggctacaaacttttattcatttgatcaagga
agaattgcggcgtataggctttttgagatgataagtcgttcatcctctgggactaatcaa
gagggaattattttgtctgctgtccaaggaaatattgagtttcggaatgtatatttcagc
tatttgtcacgacctgaaattccaatcttgagtggattttaccttactgtgccggctaaa
aaagctgttgcacttgttggtagaaatggttctggaaaaagcagtatcattcctctaatg
gaacggttttatgatcctacactaggagaagttctacttgatggagaaaatattaaaaat
ctaaaattagagtggctgagaagccaaataggcctggtgacacaggagcctgctttgctt
agtctgagcataagagagaatattgcatacggccgagatgctactctggatcagatagag
gaagcagctaaaaaagcacatgcacacacatttatcagctcacttgaaaaaggatatgaa
actcaggttggaaagactggtttaacgttgacagaggagcagaaaataaagctatcgatt
gctagagccgtactcttagatccaacaattcttttgcttgacgaggtcactggaggacta
gactttgaagctgaaagagttgtccaagaagcccttgatcttctaatgttaggaaggtct
accataataatagcccgacgactaagtctgataagaaatgctgactatattgctgtaatg
gaggagggccagctacttgaaatgggtacgcatgatgaactaatcaaccttggtaatttg
tatgctgagcttctgaagtgtgaagaagcaacaaagctacccagacggatgccagttagg
aactacaacgattctgctgcgtttcaggctgagagggattcttcagctggtcgtggcttc
caagaaccatcatcgcccaaaatggctaagtctccatctcttcagagaggtcataatgtt
ttccgctcccaggaattgtgctttaatagtgaagaatcgcccaatgatcatagccctgca
ccagagaaactgggagaaaatggctcgtcgttggatgttggtgagaaggaacccaccatc
aaaagacaagatagtttcgagatgcggttaccagaattaccaaaaattgacattcagtgt
ccacaacgtcagaaatcaaatggttcagatccggagtcccctatatcaccccttttgata
tcagatccccaaaatgagcgctctcattcacagacttttagccgccctcttggtcactca
gatgacacttcagcaagtgttaaggtggccaaggacggtcaacacaaggagccaccttca
ttttggaggttggcacagcttagttttccagagtggctatacgctgtattagggagtatt
ggtgctgcaatctttggttctttcaatcctcttctagcttatgttattgcattagtagtg
acgacatactatacgagcaagggaagccacctgcgtgaagaggttgacaagtggtgtttg
atcattgcctgcatgggaatagtgacagttgttgccaatttcttacagcacttctacttt
ggtattatgggggagaaaatgactgagagagtgcggcgaatgatgttctcagcaatgctg
cgtaatgaagttggatggtatgacgaagaagagaacagtccagatacattatccatgcgc
ctagcaaatgatgccacttttgtccgagctgccttcagcaacaggctttccatatttatt
caggatagttttgctgttatcgttgccattcttattgggctgctgctcggttggcgtttg
gcccttgttgcattagcgactttgccagtacttactctttctgccattgcccagaaactt
tggcttgctggattctcaaagggcatccaggagatgcatcgaaaggcgtccttagtactc
gaggatgctgtcagaaacatatatactgttgtcgcgttctgtgccggcaacaaggtgatg
gaactctacagactgcaactccaacggatactcaggcagagctttttccatgggatggct
attggctttgcgtttggcttctcacagtttcttctcttcgcctgtaatgcgctcctcctg
tggtacaccgcgttatcagtagaccgcagatatatgaaattgtctacagctctaaccgag
tacatggtcttctcctttgctacatttgctcttgtggagccattcggattagcaccttac
attctcaagcgccgtagatctctcgcttcagtttttgaaataatagatcgagttcctaca
atcgaacctgatgatacctcggctcttagtccgcctaacgtgtatggaagcattgaactg
aaaaacatcgacttctgctacccaacccgcccggaagtgttagtactaagcaacttcagt
ctcaaagtcaatggcggacaaacagtagctgtggttggtgtttctggttctggaaagagc
acaataatatcgttgatcgagagatactacgacccagttgctggtcaggtcttattagat
gggcgagacttgaagtcatataatttgagatggttaagaagccatatgggtctgattcaa
caggaacccataatcttttccacaacgatcagagaaaacattatatacgcaaggcacaat
gcaagtgaagctgagatgaaggaagcagcaaggattgcaaatgcccaccatttcatcagc
agcttacctcacggatacgacacacatatcgggatgagaggtgttgagcttacccaagga
caaaaacagagaatcgctatagctcgggtagtgctgaagaatgctccaatactgttgatt
gacgaagcgagttcatctatcgaatccgagtcgagccgtgttgtgcaggaagctcttgat
acattgataatggggaacaaaacaacaattctgatagcgcatagagtagcgatgatgaga
catgtggataacattgtggttctcaatggaggcaaaatagtagaggaaggtacgcatgat
tgtttagcgggtaaaaacggattgtatgtccgtttaatgcaaccacattttggcaagaat
ctacggcgacatcaactgatctaa
DBGET
integrated database retrieval system
