Arabidopsis thaliana (thale cress): AT3G07850
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Entry
AT3G07850 CDS
T00041
Name
(RefSeq) Pectin lyase-like superfamily protein
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath00040
Pentose and glucuronate interconversions
ath01100
Metabolic pathways
Module
ath_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AT3G07850
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
AT3G07850
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Motif
Other DBs
NCBI-GeneID:
819976
NCBI-ProteinID:
NP_187442
TAIR:
AT3G07850
UniProt:
P49063
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Position
3:complement(2505546..2507558)
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AA seq
444 aa
AA seq
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MVGSHKASGVLLVLLVVMATTIANGTPVVDKAKNAATAVEDTAKNAATAVGGAAASVGAK
VSGAKPGAAVDVKASGAKGDSKTDDSAAFAAAWKEACAAGSTITVPKGEYMVESLEFKGP
CKGPVTLELNGNFKAPATVKTTKPHAGWIDFENIADFTLNGNKAIFDGQGSLAWKANDCA
KTGKCNSLPINIRFTGLTNSKINSITSTNSKLFHMNILNCKNITLSDIGIDAPPESLNTD
GIHIGRSNGVNLIGAKIKTGDDCVSIGDGTENLIVENVECGPGHGISIGSLGRYPNEQPV
KGVTVRKCLIKNTDNGVRIKTWPGSPPGIASNILFEDITMDNVSLPVLIDQEYCPYGHCK
AGVPSQVKLSDVTIKGIKGTSATKVAVKLMCSKGVPCTNIALSDINLVHNGKEGPAVSAC
SNIKPILSGKLVPAACTEVAKPGP
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggtgggttctcacaaagcaagcggagtgcttcttgtgctactagtggttatggccacc
acaatagcaaacgggacaccggttgtcgataaagcaaaaaatgcagctacagcagttgaa
gatacagcaaaaaatgcagctacagcagttggcggtgcagctgcatcagttggtgctaaa
gtatcaggtgccaaaccaggcgcagcagttgatgttaaagcatcaggagccaaaggagac
agcaaaactgatgatagtgcggcatttgcggctgcatggaaagaagcttgtgcagcaggg
agcacaattacagtgccaaaaggtgagtatatggtagagagcctagagttcaaaggtcca
tgcaaaggtccagtcactttggaattgaatggcaatttcaaggctccggctacggtcaag
accactaagccacatgccggatggattgatttcgaaaatatagctgatttcactttgaat
ggaaacaaagctatttttgacggtcaagggtccctcgcttggaaggccaatgattgtgcc
aaaactggcaaatgcaactctctccctatcaacatccgattcactggtctaacaaactca
aagattaatagtattacatcaacaaacagcaaacttttccacatgaacatccttaactgc
aagaacattactctttcggatattggtattgatgcacctccggagagtctcaacaccgat
ggtatccacatcggaaggtccaatggagtcaacttaattggggcaaagatcaaaaccgga
gatgactgcgtttccattggagatggtaccgaaaatctcattgttgagaacgtagaatgt
ggaccaggacacggaatttccattggaagtcttggaagataccctaatgagcaaccagta
aaaggagtcaccgtgaggaaatgcctcatcaagaacactgacaatggtgttcgcatcaag
acatggccaggatctccccccggcatcgcctccaacattcttttcgaagatatcacaatg
gacaatgttagccttcccgttctcatcgaccaagagtactgtccttatggccactgcaaa
gctggggtaccatcgcaagtgaagttgtcagacgtgactatcaagggcattaagggtaca
tcagcaacaaaggtggctgtgaagctaatgtgcagcaaaggagtgccttgcaccaatatt
gctctctctgacatcaacttggtccacaacggcaaagagggaccagctgtctcggcatgt
tctaacatcaagcctattctcagcggaaagttggttccagcggcttgcactgaagttgct
aaaccgggtccataa
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