Arabidopsis thaliana (thale cress): AT4G38440
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Entry
AT4G38440 CDS
T00041
Symbol
IYO
Name
(RefSeq) RPAP1-like, carboxy-terminal protein
KO
K20826
RNA polymerase II-associated protein 1
Organism
ath
Arabidopsis thaliana (thale cress)
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ath03021
]
AT4G38440 (IYO)
Transcription machinery [BR:
ath03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
AT4G38440 (IYO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPAP1_C
RPAP1_N
Motif
Other DBs
NCBI-GeneID:
830001
NCBI-ProteinID:
NP_195557
TAIR:
AT4G38440
UniProt:
Q8GYU3
A0A654FWY4
LinkDB
All DBs
Position
4:17989067..17994727
Genome browser
AA seq
1465 aa
AA seq
DB search
MEQSSGRVNPEQPNNVLASLVGSIVEKGISENKPPSKPLPPRPSLLSFPVARHRSHGPHL
APVGSSIAQPKDYNDDQEEEEAEERFMNADSIAAFAKPLQRKEKKDMDLGRWKDMVSGDD
PASTHVPQQSRKLKIIETRPPYVASADAATTSSNTLLAARASDQREFVSDKAPFIKNLGT
KERVPLNASPPLAVSNGLGTRHASSSLESDIDVENHAKLQTMSPDEIAEAQAELLDKMDP
ALLSILKKRGEAKLKKRKHSVQGVSITDETAKNSRTEGHFVTPKVMAIPKEKSVVQKPGI
AQGFVWDAWTERVEAARDLRFSFDGNVVEEDVVSPAETGGKWSGVESAAERDFLRTEGDP
GAAGYTIKEAIALARSVIPGQRCLALHLLASVLDKALNKLCQSRIGYAREEKDKSTDWEA
IWAYALGPEPELVLALRMALDDNHASVVIACVKVIQCLLSCSLNENFFNILENMGPHGKD
IFTASVFRSKPEIDLGFLRGCYWKYSAKPSNIVAFREEILDDGTEDTDTIQKDVFVAGQD
VAAGLVRMDILPRIYHLLETEPTAALEDSIISVTIAIARHSPKCTTAILKYPKFVQTIVK
RFQLNKRMDVLSSQINSVRLLKVLARYDQSTCMEFVKNGTFNAVTWHLFQFTSSLDSWVK
LGKQNCKLSSTLMVEQLRFWKVCIHSGCCVSRFPELFPALCLWLSCPSFEKLREKNLISE
FTSVSNEAYLVLEAFAETLPNMYSQNIPRNESGTWDWSYVSPMIDSALSWITLAPQLLKW
EKGIESVSVSTTTLLWLYSGVMRTISKVLEKISAEGEEEPLPWLPEFVPKIGLAIIKHKL
LSFSVADVSRFGKDSSRCSSFMEYLCFLRERSQDDELALASVNCLHGLTRTIVSIQNLIE
SARSKMKAPHQVSISTGDESVLANGILAESLAELTSVSCSFRDSVSSEWPIVQSIELHKR
GGLAPGVGLGWGASGGGFWSTRVLLAQAGAGLLSLFLNISLSDSQNDQGSVGFMDKVNSA
LAMCLIAGPRDYLLVERAFEYVLRPHALEHLACCIKSNKKNISFEWECSEGDYHRMSSML
ASHFRHRWLQQKGRSIAEEGVSGVRKGTVGLETIHEDGEMSNSSTQDKKSDSSTIEWAHQ
RMPLPPHWFLSAISAVHSGKTSTGPPESTELLEVAKAGVFFLAGLESSSGFGSLPSPVVS
VPLVWKFHALSTVLLVGMDIIEDKNTRNLYNYLQELYGQFLDEARLNHRDTELLRFKSDI
HENYSTFLEMVVEQYAAVSYGDVVYGRQVSVYLHQCVEHSVRLSAWTVLSNARVLELLPS
LDKCLGEADGYLEPVEENEAVLEAYLKSWTCGALDRAATRGSVAYTLVVHHFSSLVFCNQ
AKDKVSLRNKIVKTLVRDLSRKRHREGMMLDLLRYKKGSANAMEEEVIAAETEKRMEVLK
EGCEGNSTLLLELEKLKSAALCGRR
NT seq
4398 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaagtagcgggagagtcaatccggaacagccgaacaacgtcttggcgagcctt
gtcgggagcatcgtggagaaaggaatatcggagaataagcctccaagcaagccgcttccc
ccaaggccctcccttctttccttccccgtcgctcgtcatcgttctcacggaccccatttg
gctcctgtgggaagcagcatagcacaacctaaggattacaatgacgatcaggaagaagaa
gaagcagaagaacgtttcatgaatgcagactccattgctgcttttgctaaaccgcttcaa
agaaaagagaagaaagacatggacctcgggaggtggaaagatatggtctctggggatgat
cctgcatccacacatgtccctcagcaatcaaggaaacttaagatcattgaaacgagaccg
ccctatgttgcttcagccgatgcggccactacatccagcaacactttactggctgccagg
gcatcagaccagagagagtttgtttctgataaagcaccgtttattaaaaatttgggaacc
aaggaaagggttcctttaaacgcttctcctcccctagctgtttcgaatggacttgggact
cgacacgcgtcttcgtctcttgaaagtgatattgatgttgagaaccatgcaaagttgcag
acaatgtcacccgacgagattgctgaggctcaggctgagttattggacaagatggatcct
gcactactctccattttgaagaaacgaggtgaggcaaaattgaagaagcgaaagcattct
gtgcagggggtttccatcaccgatgaaacagcaaagaattcaagaactgagggtcatttt
gtcactcctaaagtgatggcaataccgaaagaaaaaagtgtggtgcaaaagccagggata
gcccaaggattcgtgtgggatgcatggactgagagggttgaggcagccagagacttgaga
ttttcttttgacgggaatgttgttgaggaagatgttgtctcgccagctgaaactggtgga
aagtggtctggtgttgaatctgctgccgaacgtgatttcttgagaaccgagggggatcct
ggggccgcaggttacactatcaaagaagctattgctcttgcacgaagtgtgattcccggg
cagagatgtcttgctttgcatctgcttgcatctgtactcgacaaagctttgaacaaactt
tgtcaaagcagaataggctacgcaagggaagaaaaagataaatccactgactgggaagcc
atctgggcttatgcccttggaccggaacctgagcttgtcttagcattgaggatggctctt
gatgacaaccatgcctctgttgttatagcatgtgtaaaagtgattcagtgtctactgagc
tgttctcttaacgagaatttctttaatattctggagaacatgggaccacacgggaaagat
atcttcacggcctcggtgttcaggagtaagccggaaattgatcttggcttcctccgtggt
tgctactggaagtacagcgctaaaccctccaatattgttgcgttccgtgaagaaatcttg
gatgacgggacagaagatacggatactattcagaaagatgtttttgtagccggacaagat
gttgctgctggtctcgtcagaatggatatccttccaagaatttatcaccttctggagaca
gaaccaacagcagcgcttgaggacagcataatctctgttactattgcgatagcaaggcat
tctccaaaatgcacaactgcaatcttgaagtatcccaaatttgtgcaaacaattgtgaaa
agattccaattgaacaaaagaatggacgttctttcttctcagatcaactctgtccgcctc
ttaaaggtgttggcccggtatgatcaaagtacttgcatggaatttgtgaagaatgggact
ttcaatgcggtcacatggcatttgtttcagttcacctcatctcttgactcatgggtgaag
ctagggaagcagaactgcaagctttcatctaccttgatggttgaacagctccggttttgg
aaggtctgtatccatagtggctgttgcgtatctcgcttcccagagctattcccagctctg
tgtctgtggttgagttgtccatcattcgaaaagctcagggagaaaaatctcatcagcgag
tttacttctgtgtcaaacgaggcctacctggtccttgaggcttttgccgagacacttcct
aatatgtactcacaaaacattccacggaatgaatctgggacatgggactggagctatgtt
agccctatgattgattcagcactgagttggataacattggccccgcaattactcaagtgg
gagaaaggaatcgaaagtgtctctgtatcaactactactctgttgtggttgtattcaggt
gtcatgcgtacaatttccaaagtccttgagaaaatctctgcggagggagaggaagaacct
ctaccatggctaccggagtttgttccaaagattggccttgccattatcaagcacaagctt
cttagtttttctgttgcagacgtaagtaggtttggaaaagactcttccaggtgttcctct
tttatggagtatttgtgttttctaagagaacgatctcaagatgacgaactagcattagct
tctgtgaattgtcttcatgggttaacacggactatcgtgtccatccaaaatctgatagaa
tctgctagatccaagatgaaagctccgcatcaggtaagtatttccactggagatgaatct
gtgcttgcaaatgggatactggcagagtctctggctgagctaacatctgtgtcgtgctct
tttagagattctgtttcatcagaatggcccatcgtgcaatcaattgagctacataaacga
ggcggattggcccccggcgttggacttggttggggagctagcggtggtgggttttggtca
accagagttctgttggcacaggctggtgccggtcttctgagtctctttcttaacatctct
ctgagcgactcgcagaatgatcagggatctgttggctttatggataaagtaaactccgct
ttagctatgtgtttgattgcaggtccaagggattatttactcgtggaaagagcctttgaa
tatgtccttagaccgcatgctttagaacacctggcctgctgtatcaagtcaaacaaaaaa
aacatatcgtttgaatgggaatgcagcgaaggggactatcatcgtatgagcagtatgctt
gcttctcacttcagacatagatggttacagcaaaagggaagatcgatagccgaggaaggg
gtcagtggggtaaggaagggcacagttggtctggagactattcatgaggacggtgaaatg
tcaaatagttcaactcaggataaaaaatcagactcctcgaccatagagtgggctcaccag
agaatgcccctacctccacactggtttctcagcgccatctcagcagtccacagtggtaaa
acctcaacagggccaccagaatccacagagttgcttgaagttgcaaaagctggagttttc
tttcttgcaggacttgagtcatcgtctggttttggatcgcttccctctcctgttgtgagt
gtaccgttggtttggaagtttcacgctttgtctaccgtattgcttgttggaatggacatc
atcgaagacaagaacactaggaacttgtacaattatctgcaggagctttatgggcagttt
cttgatgaagcgagactaaatcaccgtgacactgagcttctgaggttcaagtcagacatt
catgagaactactctacttttctggagatggtggtggagcagtatgctgcggtgtcatat
ggtgatgtagtgtatggccggcaggtctcggtttacctgcatcaatgcgtggaacactct
gttcggctttcggcatggacagtgctctccaatgcccgtgttctcgagcttctgccgagt
ctagacaagtgcttgggagaagcggatggttacctcgaacctgttgaggaaaatgaggcc
gtccttgaggcctacctgaagtcatggacttgtggggcattggacagagctgcgacgcgt
ggatcagtagcctatacgctggttgtgcatcacttttcatctttagtcttttgcaaccaa
gccaaggataaagtatccctgcggaataagattgtcaagactcttgtcagggatttatca
agaaagcggcatcgtgaggggatgatgttagatctcctgcggtataagaaagggtctgcg
aacgccatggaagaagaagtgatagcagcggagacagagaaaagaatggaggtgttgaaa
gagggttgcgaagggaactccaccctcctcttggaactggagaagctgaaatcagccgct
ctctgtggaagaaggtga
DBGET
integrated database retrieval system
