Arabidopsis thaliana (thale cress): AT5G06600
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Entry
AT5G06600 CDS
T00041
Symbol
UBP12
Name
(RefSeq) ubiquitin-specific protease 12
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
AT5G06600 (UBP12)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ath01002
]
AT5G06600 (UBP12)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ath04121
]
AT5G06600 (UBP12)
Enzymes [BR:
ath01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
AT5G06600 (UBP12)
Peptidases and inhibitors [BR:
ath01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
AT5G06600 (UBP12)
Ubiquitin system [BR:
ath04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
AT5G06600 (UBP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
USP7_C2
UCH
MATH
UCH_1
RA
ubiquitin
SASP
Malt_amylase_C
Motif
Other DBs
NCBI-GeneID:
830548
NCBI-ProteinID:
NP_568171
TAIR:
AT5G06600
UniProt:
Q9FPT1
LinkDB
All DBs
Position
5:complement(2019084..2028116)
Genome browser
AA seq
1116 aa
AA seq
DB search
MTMMTPPPVDQPEDEEMLVPNSDLVDGPAQPMEVTQPETAASTVENQPAEDPPTLKFTWT
IPNFSRQNTRKHYSDVFVVGGYKWRILIFPKGNNVDHLSMYLDVSDAASLPYGWSRYAQF
SLAVVNQIHTRYTVRKETQHQFNARESDWGFTSFMPLSELYDPSRGYLVNDTVLVEAEVA
VRKVLDYWSYDSKKETGFVGLKNQGATCYMNSLLQTLYHIPYFRKAVYHMPTTENDAPTA
SIPLALQSLFYKLQYNDTSVATKELTKSFGWDTYDSFMQHDVQELNRVLCEKLEDKMKGT
VVEGTIQQLFEGHHMNYIECINVDFKSTRKESFYDLQLDVKGCKDVYASFDKYVEVERLE
GDNKYHAEGHGLQDAKKGVLFIDFPPVLQLQLKRFEYDFMRDTMVKINDRYEFPLELDLD
REDGKYLSPDADRSVRNLYTLHSVLVHSGGVHGGHYYAFIRPTLSDQWYKFDDERVTKED
LKRALEEQYGGEEELPQTNPGFNNNPPFKFTKYSNAYMLVYIRESDKDKIICNVDEKDIA
EHLRVRLKKEQEEKEDKRRYKAQAHLYTIIKVARDEDLKEQIGKDIYFDLVDHDKVRSFR
IQKQTPFQQFKEEVAKEFGVPVQLQRFWIWAKRQNHTYRPNRPLTPQEELQPVGQIREAS
NKANTAELKLFLEVEHLDLRPIPPPEKSKEDILLFFKLYDPEKAVLSYAGRLMVKSSSKP
MDITGKLNEMVGFAPDEEIELFEEIKFEPCVMCEHLDKKTSFRLCQIEDGDIICFQKPLV
NKEIECLYPAVPSFLEYVQNRQLVRFRALEKPKEDEFVLELSKQHTYDDVVEKVAEKLGL
DDPSKLRLTSHNCYSQQPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGL
KTLKVAFHHATKEEVVIHNIRLPKQSTVGDVINELKTKVELSHPDAELRLLEVFYHKIYK
IFPSTERIENINDQYWTLRAEEIPEEEKNIGPNDRLILVYHFAKETGQNQQVQNFGEPFF
LVIHEGETLEEIKNRIQKKLHVSDEDFAKWKFAFMSMGRPEYLQDTDVVYNRFQRRDVYG
AFEQYLGLEHADTTPKRAYAANQNRHAYEKPVKIYN
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atgactatgatgactccgcctcccgttgatcagccagaagatgaggagatgcttgtgccg
aattcagatttggtcgacggtcctgctcagcccatggaagttacccaacccgagactgct
gcgagtactgtggagaaccagccagctgaggatcctcctactctgaaattcacgtggact
atccctaatttctctaggcaaaacaccaggaagcattactccgatgtatttgtcgttgga
ggttacaaatggcgcatattaattttcccgaaagggaacaatgttgatcatttgtccatg
tacttggatgtttctgatgctgcgagtttgccgtacggttggagcagatatgctcagttc
agtctggctgtagtcaatcaaatccacaccagatataccgttagaaaagagacgcaacat
caattcaatgctagagaaagcgattggggatttacatcattcatgccacttagcgaactt
tatgatcctagtagaggatatttagtgaatgatactgttttggttgaagctgaagtcgct
gtacgtaaggttcttgattactggtcatatgactctaaaaaagagactggttttgttgga
ctcaagaaccaaggtgcaacatgctacatgaattctctcctacagacactataccacata
ccttacttcagaaaggctgtataccacatgccaacaactgagaatgatgcacccacagca
agtataccgttggctctccaaagtttgttttacaagctccaatacaatgacactagtgtt
gcaacaaaagagctgacaaagtcgtttggttgggatacatatgattccttcatgcagcat
gatgtgcaagaactcaatcgggttctctgcgaaaagcttgaggacaaaatgaagggaact
gttgtggagggaacaatacaacaactttttgagggccaccatatgaattacattgagtgc
ataaatgtagattttaaatctacacggaaagaatcattttacgaccttcagctggatgtt
aaaggctgcaaggatgtttatgcttcttttgacaagtatgttgaagttgaacgtcttgaa
ggagacaacaaatatcatgcagaaggacatggtttacaggatgcaaaaaaaggtgttctt
ttcattgactttccaccggttcttcaactccagctcaagaggtttgaatatgactttatg
agggacaccatggtgaagataaatgatcggtatgagtttccgcttgaactggatcttgat
agagaagatggaaagtatctgtcgcctgatgctgacaggagtgtccgcaacctttatact
cttcacagtgttttagttcatagtggaggagtacatggtgggcactattatgcttttata
aggcctacgctctcagatcagtggtataaatttgatgatgaacgagtaaccaaggaagat
ttgaaaagggctttggaggagcaatatggtggtgaagaagagctaccacagactaatcct
ggtttcaataataaccctcctttcaaattcacaaagtactcgaatgcttacatgcttgta
tatatccgagaaagtgacaaagataaaataatctgcaacgttgatgagaaagacatagca
gaacatttaagggtgaggctaaagaaagagcaagaagaaaaggaagataaaagaagatac
aaggcacaagctcacttatataccataattaaggttgcaagagatgaagaccttaaggaa
caaattgggaaggatatatattttgatcttgtggatcatgacaaagttcgcagtttccgt
atccagaaacagacaccatttcaacagtttaaggaggaggtagcaaaagaatttggtgta
cctgttcagttacagaggttctggatttgggcaaagagacaaaaccatacctatcgtccc
aatcgcccccttacgcctcaagaggaattacaaccggttggacaaataagggaagcatct
aataaggcaaacactgcagaactcaagctttttttggaagtagagcacctggatttacgt
cctattcctcctcctgaaaaatcaaaagaagatattcttcttttcttcaagctttatgac
cccgagaaggcagtattaagctatgctggcaggctgatggtgaaaagttccagtaagcct
atggatataactggaaaactgaatgaaatggttggctttgctcctgatgaagaaatagaa
ctttttgaggaaatcaagtttgaaccttgtgttatgtgcgaacacttggataagaaaact
tcattcagattgtgtcaaattgaagatggagatatcatttgctttcagaaacctcttgtt
aacaaggagattgaatgcctctacccagctgtgccttcgtttcttgaatatgtccagaat
agacagctggtccggtttcgtgctctggaaaaacctaaagaagatgagtttgttctggag
ttgtcgaagcagcacacttatgacgatgttgtggagaaagtggctgagaagcttggtctt
gacgatccatccaaacttaggcttacatctcacaattgctattcccagcaacccaagcct
cagcctatcaagtaccgtggagtagaccatttgtcagatatgttagttcattacaatcag
acgtctgacattttgtattatgaagttctggacatccctcttccagaattacaaggtctt
aaaaccttaaaagttgctttccatcatgccacgaaggaagaagtggtaatccacaatatc
agactacctaaacaaagcacggtcggagatgttattaatgaacttaaaacaaaggtggag
ctttcgcatccagatgcagaactgagattgctcgaggtgttttaccacaagatctacaag
attttcccatcaactgaaagaattgagaatataaatgaccagtactggactttacgagct
gaggagattccggaagaagagaagaatattggtccaaatgatcgcttaattcttgtgtac
cattttgccaaggagactggacaaaaccagcaagtgcaaaactttggcgagcccttcttc
ttggtaatccatgaaggtgaaactcttgaagaaatcaagaaccgtatccaaaagaagctt
catgtatctgatgaagattttgccaagtggaagtttgcgttcatgtcaatggggcgtcca
gagtacttgcaggacacagatgttgtttataatcgcttccagagaagagatgtctatggt
gcttttgagcagtacctcgggttggagcatgctgacactactcctaagagggcttatgct
gcaaaccagaaccgccatgcttacgagaagccggtaaaaatatacaattag
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