Arabidopsis thaliana (thale cress): AT5G19420
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Entry
AT5G19420 CDS
T00041
Name
(RefSeq) Regulator of chromosome condensation (RCC1) family with FYVE zinc finger domain-containing protein
Organism
ath
Arabidopsis thaliana (thale cress)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RCC1
RCC1_2
BRX
BRX_assoc
BRX_N
FYVE
PH_12
LRS4
ATG16
Tropomyosin
Mcp5_PH
SGT1
Antigen_Bd37
PH
Motif
Other DBs
NCBI-GeneID:
832062
NCBI-ProteinID:
NP_001190338
TAIR:
AT5G19420
UniProt:
F4K148
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All DBs
Position
5:complement(6547625..6553283)
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AA seq
1139 aa
AA seq
DB search
MWSGFRDCTRNGRMTPSDLSRAGPVTRDIEQLKIELYSTFGVSKLDSSYILENKNALHAI
TALKKGAYLLKYGRRGKPKFCPFRLSNDESVLIWFSGKEEKHLKLSHVSRIISGQRTPIF
QRYPRPEKEYQSFSLIYDERSLDLICKDKDEAEVWFSGLKALISRCHQRKWRTESRSDGT
PSEANSPRTYTRRSSPLHSPFSSNESFQKEGSNHLRLHSPYESPPKNGVDKAFSDMSLYA
VPPKGFFPPGSATMSVHSLSSGGSDTLHGHMKGMGMDAFRVSLSSAISSSSHGSGHDDGD
TLGDVFMWGEGIGEGVLGGGNHRVGSSLEIKMDSLLPKALESTIVLDVQNIACGGQHAVL
VTKQGESFSWGEESEGRLGHGVDSNVQHPKLIDALNTTNIELVACGEYHSCAVTLSGDLY
TWGKGDFGILGHGNEVSHWVPKRVNFLMEGIHVSSIACGPYHTAVVTSAGQLFTFGDGTF
GVLGHGDRKSVFIPREVDSLKGLRTVRAACGVWHTAAVVEVMVGSSSSSNCSSGKLFTWG
DGDKSRLGHGDKEPKLVPTCVAALVEPNFCQVACGHSLTVALTTSGHVYTMGSPVYGQLG
NPHADGKVPTRVDGKLHKSFVEEIACGAYHVAVLTSRTEVYTWGKGSNGRLGHGDADDRN
SPTLVESLKDKQVKSIACGSNFTAAVCLHKWASGMDQSMCSGCRQPFNFKRKRHNCYNCG
LVFCHSCSNKKSLKACMAPNPNKPYRVCDRCFNKLKKAMETDPSSHSSLSRRESVNQGSD
AIDRDEKLDTRSDGQLARFSLLEPMRQVDSRSKKNKKYEFNSSRVSPIPSGGSHRGSLNI
TKSFNPTFGSSKKFFSASVPGSRIASRATSPISRRPSPPRSTTPTPTLSGLTTPKIVVDD
TKRSNDNLSQEVVMLRSQVENLTRKAQLQEVELERTTKQLKEALAIASEESARCKAAKEV
IKSLTAQLKDMAERLPVGSARTVKSPSLNSFGSSPDYAAPSSNTLNRPNSRETDSDSLTT
VPMFSNGTSTPVFDSGSYRQQANHAAEAINRISTRSKESEPRNENEWVEQDEPGVYITLT
ALAGGARDLKRVRFSRKRFSEKQAEEWWAENRGRVYEQYNVRIVVDKSSVGVGSEDLGH
NT seq
3420 nt
NT seq
+upstream
nt +downstream
nt
atgtggagtggatttcgtgattgcacgaggaacggacgaatgacgccgtcggatcttagt
agagccggtccagtgacgagggatattgagcagctaaagattgagctctattccactttt
ggagtctccaagcttgactctagctatatattggagaacaaaaatgcacttcatgctatc
actgctcttaaaaaaggagcttatttgcttaagtatggcagaaggggaaagcctaagttc
tgtccatttcgcctttcgaatgatgaatctgttttgatatggttttctgggaaggaggaa
aaacatttgaagctaagtcatgtttccaggatcatctctgggcagcgcactcctattttt
cagagatatccacgtcctgagaaggaatatcaatcgttctcgctaatatatgacgagagg
tcactggatttgatatgcaaggataaagatgaggctgaagtgtggtttagtggtctaaaa
gccttgatatcccgttgtcatcaacggaaatggaggaccgaatcgagaagtgatggaacg
ccatccgaagctaatagtccgagaacatatacccggagaagctcccctttacattctcca
tttagtagcaatgaaagtttccagaaggagggctcaaatcaccttcgtcttcacagtcca
tatgagagcccgcctaagaatggcgttgacaaggcattttcagacatgtcgttgtatgca
gttcctccaaaaggttttttccccccaggttcggcaactatgtcagttcactctttgtca
tctggaggctcagatacgctacatggtcacatgaaaggaatgggtatggatgcttttaga
gttagtctgtcaagtgcgattagttcgtcgagccatggttctggtcatgatgatggagac
acattgggagacgttttcatgtggggagaaggaataggcgaaggtgttttgggtggtgga
aaccacagagttggaagttcgttggagatcaaaatggattccttactgccaaaagcttta
gagtctactatagtacttgatgtccagaatattgcttgcggtggacaacatgctgtcctt
gtaacaaaacaaggagaaagtttttcttggggagaggaatctgaaggtaggcttggccat
ggtgtggattccaatgttcaacatccaaagctcattgatgccctcaataccacaaatatt
gagcttgtagcatgtggtgaataccatagttgtgcagttactctatcgggggatttgtat
acctggggtaaaggagattttggtattctgggacatggaaatgaagtcagtcactgggtc
cccaaaagagtaaattttctgatggaagggatacatgtatcatccatcgcttgtgggcct
taccacacagctgttgtgacttccgctgggcagttgtttacttttggtgatgggaccttt
ggtgttttgggccatggagacaggaaaagtgttttcatacctagagaggtagactccttg
aaaggtcttcgcactgttcgggcagcctgtggtgtatggcacacagccgcagttgtagaa
gtcatggttgggagctcgagctctagtaactgctcttcaggaaagctctttacatggggt
gatggtgacaagagtcgtcttggtcatggtgacaaagaaccaaaacttgtgcctacctgt
gttgcagctcttgtagaacctaatttttgtcaagttgcgtgtggacatagcctaacagtt
gcacttacaacatcgggccacgtctatactatgggcagtcctgtttatggtcagcttgga
aacccacatgcagatggaaaggttccaacccgtgtcgacggcaaacttcacaagagtttt
gtcgaagagattgcttgcggtgcttatcatgttgcagttttaacttcaaggactgaggtt
tacacttggggaaaaggatcaaatggtagactaggccatggggatgcagatgatcgaaat
tcccccacattggttgagtcgctgaaggataaacaggtgaaaagtattgcatgtggttct
aacttcaccgcagctgtctgtcttcacaagtgggcatcagggatggaccagtccatgtgt
tcaggttgccgtcagcctttcaatttcaagagaaagcggcacaattgctataactgtgga
cttgtgttttgccattcttgcagtaataaaaagtccctgaaggcttgtatggcaccaaac
cctaacaaaccatatcgagtgtgtgataggtgtttcaacaaattgaaaaaggccatggaa
acggatccatcatctcattcttctttgagtcgaagagaaagtgtcaaccaaggatcagat
gcaattgacagagatgagaagttggatactagatccgacggacagctagctagattctca
ttgttggagcccatgaggcaagtggacagtcgatccaagaaaaataagaaatatgaattc
aatagtagtcgtgtctcaccaataccgagtgggggctcgcaccggggttcactaaacata
accaagtcttttaatccaactttcggatcatcaaagaaattcttctcagcttcagttcct
ggttcccgaattgcgtcccgggcaacttcaccaatatcaagacgtcctagcccacctcgg
tcaacaacgccaactcccactctttcaggactaactacaccaaaaattgtcgtggatgat
accaagagaagcaatgataacctaagccaagaggtggttatgctaagatctcaagttgaa
aatcttacacggaaggcacaacttcaagaagttgaactggaaagaacaaccaaacagcta
aaggaggcactagcaattgctagtgaagaatcagcgagatgcaaggcagcaaaagaagtg
atcaaatcacttaccgctcaattgaaagacatggctgaaagactacctgttggatcagct
cggactgtcaagtctccgtctctcaattcatttggttccagtcctgattacgctgcccct
tcttctaacaccttaaaccgtccaaacagtcgagaaactgattctgatagcctaaccacc
gtcccaatgttttcaaatgggaccagcacacctgttttcgatagtggaagttaccgacag
caagctaatcatgctgctgaagcgataaatagaatcagcacacgatcaaaagaaagtgaa
ccccgtaacgaaaatgaatgggttgaacaagatgaacctggtgtgtacatcactctcaca
gccttagctggaggtgcaagggatctcaaacgtgtccgtttcagccggaagcggtttagt
gagaaacaagcagaagaatggtgggcagagaacagaggaagagtttacgaacaatacaat
gtacgcatagtagttgataaatccagtgtgggtgtaggaagtgaagacttgggtcattaa
DBGET
integrated database retrieval system
