KEGG   Arabidopsis thaliana (thale cress): AT5G43620
Entry
AT5G43620         CDS       T00041                                 
Name
(RefSeq) Pre-mRNA cleavage complex II
  KO
K14400  pre-mRNA cleavage complex 2 protein Pcf11
Organism
ath  Arabidopsis thaliana (thale cress)
Pathway
ath03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ath00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    AT5G43620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ath03021]
    AT5G43620
   03019 Messenger RNA biogenesis [BR:ath03019]
    AT5G43620
Transcription machinery [BR:ath03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     AT5G43620
Messenger RNA biogenesis [BR:ath03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Pre-mRNA cleavage factor IIm (CFIIm)
     AT5G43620
SSDB
Other DBs
NCBI-GeneID: 834382
NCBI-ProteinID: NP_199175
TAIR: AT5G43620
UniProt: Q9FIX8
LinkDB
Position
5:17522486..17524003
AA seq 410 aa
MASNGSFSAQRNANAGTTMKRRNDNRGYGGGIGCYQEERNRYAPPQKRFRSQLQQQFRSG
HNPLYHYGSNTNNNVSRVSSQSYNNYGVDVIASNSSFALPNNDSNTNNYQKPFVVYGNPN
PQIVPLPLPYRKLDPLDSLPQWVPNSTPNYPVRSSNFVPNTPDFTNVQNPMNHSNMVSVV
SQSMHQPIVLSKELTDLLSLLNNEKEKKTSEASNNDSLPVGLSFDNPSSLNVRHESVIKS
LYSDMPRQCTSCGVRFKCQEEHSKHMDWHVRKNRSVKTTTRLGQQPKKSRGWLASASLWL
CAPTGGGTVEVASFGGGEMQKKNEKDQVQKQHMVPADEDQKNCALCVEPFEEFFSHEADD
WMYKDAVYLTKNGRIVHVKCMPEPRPAKDLREPSRVMSVTVPSVAKAILC
NT seq 1233 nt   +upstreamnt  +downstreamnt
atggcatcaaacggatccttctctgctcagagaaacgcaaacgctggaacaacgatgaag
agacgaaacgacaatcgcggttacggtggcggaatcggatgttatcaagaggagaggaac
cgttacgcgccgccgcaaaaacgtttcagatcgcaactgcaacagcaattccgatctggt
cataatcctctgtatcattatggtagtaatactaataataacgtgtctagggtttcttct
cagtcatataacaattacggtgttgatgtgattgcttctaattcaagttttgctttacct
aacaatgattctaacaccaacaattatcagaaaccctttgttgtttatggaaaccctaat
ccccaaattgttcctcttccattaccttatcgtaagcttgatcctttagattcgttgcct
caatgggttccaaattcaactccgaattatcctgttaggtcatcgaattttgtaccaaac
acacctgattttacgaatgttcaaaatccgatgaatcattcgaacatggtttcagttgtg
tctcaatcgatgcatcaaccaattgttttaagcaaagaattgactgatttgcttagtctt
cttaacaatgagaaagagaagaaaacttcagaagcaagtaataatgattcattgcctgtt
ggattaagctttgacaatccatcatcgcttaatgttcgacatgaatctgtgattaagtct
ctgtattctgatatgccgaggcaatgtacttcgtgtggggtgagattcaaatgtcaagaa
gagcatagtaaacatatggattggcacgtaaggaagaacaggtcggtgaaaaccactaca
agacttggtcagcaaccgaagaaatcgaggggatggttagcgagtgcatctttatggctt
tgtgcaccaacgggaggagggaccgtagaagtagcatcttttggaggaggagaaatgcag
aagaagaatgaaaaggatcaagtacaaaaacaacacatggtgcctgcggatgaagatcag
aagaattgcgcgttatgcgtagagccgtttgaagagttctttagccatgaagctgatgac
tggatgtacaaagatgcagtctacttaaccaagaatggtcgtatagttcatgttaagtgt
atgcctgaaccccgacctgctaaggatttgagagagccgtcgagggtaatgtctgttaca
gttccatcggttgcgaaagctatactctgctga

DBGET integrated database retrieval system