Arabidopsis thaliana (thale cress): AT5G57970
Help
Entry
AT5G57970 CDS
T00041
Name
(RefSeq) DNA glycosylase superfamily protein
KO
K01246
DNA-3-methyladenine glycosylase I [EC:
3.2.2.20
]
Organism
ath
Arabidopsis thaliana (thale cress)
Pathway
ath03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ath00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT5G57970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ath03400
]
AT5G57970
Enzymes [BR:
ath01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.20 DNA-3-methyladenine glycosylase I
AT5G57970
DNA repair and recombination proteins [BR:
ath03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AT5G57970
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adenine_glyco
Motif
Other DBs
NCBI-GeneID:
835908
NCBI-ProteinID:
NP_200605
TAIR:
AT5G57970
UniProt:
A0A5S9YF92
Q9FJL9
LinkDB
All DBs
Position
5:23466685..23469015
Genome browser
AA seq
347 aa
AA seq
DB search
MSGAPRVQSMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERSSSGRTGSDEKTSY
ATPTETVSSSSQKHTLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTGRLIRS
YSVGSRSKSYPSKPRSVVSEGALDSPPNGSETKKRCTWVTPNSDPCYIVFHDEEWGVPVH
DDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPGSPASTL
LSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTPKAEVIS
KDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHCIFEHERYV
NT seq
1044 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgctcctagagttcagtccatgaatgtggctgaagcagagaccaggtcaact
ctggggtctactgctaaaaaggctagtcctttcatcacacacaaagctgtatcaaagtca
ctgcgaaagcttgaaagatcctcatctgggcgtactggatcagatgagaaaacatcttat
gctacaccaacagaaactgtgtcttcttcttctcagaagcatactcttaatgcggcttct
atactacgacggcatgagcagaacctgaattctaatctgtcacttaatgcatcgttttca
tctgatgcctccatggactcgttccacagccgagcatcaactggtcgcttgattaggtcg
tacagtgttggaagtagaagtaagtcttacccttccaagccaagaagtgttgtctctgaa
ggtgctttggattcaccacctaatggttcagagactaagaagaggtgtacttgggtgaca
ccaaactccgatccatgttatatagttttccatgatgaagaatggggtgtgccagttcac
gatgacaagaggttgtttgaactccttgtgctttcgggtgctttggccgaacacacatgg
cctacgatactgagcaagagacaggctttcagggaagtttttgctgattttgaccccaat
gccattgtgaaaatcaatgagaagaagataattggtccaggaagcccggcaagcacttta
ttgtctgatcttaagctaagggcagtcattgagaatgcacgccagatacttaaggtgata
gaagaatacggatcatttgacaagtatatatggagttttgtgaagaataaggcgattgtg
agcaagttcaggtaccagcgacaagtacctgcaaaaactccaaaagcagaagtgataagt
aaagatctagtgagaagagggttccgcagcgtcggaccaacggtggtttactccttcatg
caggcagcagggataacaaacgatcatcttaccagttgtttcaggttccaccattgtata
ttcgaacatgaaaggtatgtctga
DBGET
integrated database retrieval system
