Aliarcobacter thereius: ATH_1271
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Entry
ATH_1271 CDS
T07638
Name
(GenBank) helicase, RecD/TraA family (non-RecBCD)
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
athr
Aliarcobacter thereius
Pathway
athr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
athr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ATH_1271
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
athr03400
]
ATH_1271
Enzymes [BR:
athr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ATH_1271
DNA repair and recombination proteins [BR:
athr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ATH_1271
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
HHH_4
AAA_19
UvrD_C_2
Viral_helicase1
SH3_13
HHH_5
PIF1
Mg_chelatase
PhoH
AAA
AAA_22
Sigma54_activ_2
Ribosomal_S13
AAA_33
AAA_16
T2SSE
Motif
Other DBs
NCBI-ProteinID:
QBF16318
LinkDB
All DBs
Position
complement(1228072..1230411)
Genome browser
AA seq
779 aa
AA seq
DB search
MMMETEKKYNLSGVLKKVLYQNDENKYVIAVLDNNQKICGTYFDTNIEKLVGEEILLKGN
WITHSKYGVQFEFDTLEVKEQELFFFLTKIVKGFTKKAASEILDKYGEEKLIDILENNPN
ELLNIKGIKEKKLKMILSSWHSFKHLRELGAFLAKFKVSSSLITKIYSTFSEIENLIEKI
KENPYILTNIKGIGFKRADEIAKSLGIDPKSAFRLRSCINYTLKEYCDNNGNSSIDKYHL
YKLLDDSLRFDNEELLYEEVIIQMLAKEELFSTKENRVALSMLYYSERSILEFFNRRKDD
KNRKIVENFDEYLEKKQESLGFILSDEQKKAVKLINSGEKTLFLIGYAGTGKSTSSRAIL
ELLGEVVSYDDIMTIALSGIASQRISDTTGYNSCTIQSLLVKHKEKDFFPYKVILLDEAS
MVNSITFYQIISKISDDTVFIIVGDDGQLPAIGAGNILADSIKYELAPICKLTKIYRQNE
NQAIALIANEIRKGELPNYKEDYEDFKFVDVSINNYYGIKNSLSNSEFSNMRFENSELIL
NTILNIASEFIVDYYSFIKDKSIGKALTLFQVITPMKGGVLGVENINIELQKLFNHTKNR
SLKIKDMEYKLTDKVIHIKNENMKAQTMSMYKNNSSEFLERRVYNGQLGLIIKLDFDDEK
CIVLYPNDDMVVFYDFDNINNLLNLAYCLTIHKTQGMEYENALIPMSFSHYIMHNTKLLY
TAITRAKKMCFVVGEEEAFKSACKKIEVTIRESVVNDILSKNIVLEEKSLETNSISIPI
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atgatgatggaaactgaaaaaaagtacaatttaagtggtgtacttaaaaaggtactttat
caaaatgatgagaataaatatgtaattgcagtattagataataatcaaaaaatctgtgga
acatattttgatacaaatattgaaaaacttgttggagaagagatacttttaaaaggaaac
tggataactcatagtaaatatggagttcagtttgaatttgatactttggaagtaaaagag
caagagcttttcttttttcttacaaaaatagtaaaaggctttacaaaaaaagcagcaagt
gagattttggataaatatggagaagagaagttaatagatattttagaaaacaatccaaat
gaacttttaaatattaaaggaattaaagagaaaaaattaaagatgattctatcatcttgg
cactcttttaaacatttaagagaactaggagcttttttagcaaaatttaaagtaagttca
agtcttattacaaaaatatattcaacttttagtgagattgaaaacttaattgaaaagata
aaagagaatccatatattttaacaaacataaaaggaataggttttaaaagagcagatgag
attgcaaaatctttaggaatagatcctaaatctgcttttagattaagatcttgtataaat
tatactttaaaagagtattgcgataataatggtaactcttcaatagataaatatcattta
tataaacttttagatgatagtttaagatttgataatgaagagcttttatatgaagaggtt
atcatacaaatgttggcaaaagaagagcttttttctacaaaagagaatagagttgcctta
tcaatgctttattattctgaaagatctattttagagttttttaatagaagaaaagatgat
aaaaatagaaaaattgtagaaaactttgatgaatatttagaaaaaaagcaggaaagttta
ggatttattttaagtgatgaacaaaaaaaagctgttaaacttataaatagtggagaaaaa
acactatttttaattggatatgctggaactggaaaatctacttcaagtagggctatttta
gaacttctaggagaagttgtatcttatgatgatattatgacaattgcactttctggaatt
gcaagtcaaagaataagtgatacaacaggatataactcatgtacaattcaaagcctttta
gtaaaacataaagagaaagatttttttccttataaagtgatacttcttgatgaagcctca
atggtaaattctataactttctatcaaataataagcaaaatttctgatgatacagttttt
ataatagttggtgatgatggacagcttccagcaattggagctggaaatatattagctgat
agtataaaatatgaattagctccaatttgtaagcttacaaaaatttatagacaaaatgag
aaccaagcaattgctttaattgcaaatgagataagaaaaggtgaattaccaaactataaa
gaagattatgaagattttaaatttgtagatgtttcaataaacaactattatggaataaaa
aactctttgagtaatagtgagttttcaaatatgagatttgaaaatagtgaacttatatta
aatactattttaaatattgcaagtgagtttatagtagattattactcttttataaaagat
aaaagcataggaaaagcattaactctttttcaagtaataactcctatgaaaggtggagtt
ttaggagtagagaatataaatattgaactacaaaaattatttaatcatacaaaaaataga
agtttaaaaataaaagatatggagtataaattaactgataaagttatacatattaaaaat
gaaaatatgaaggctcaaactatgagtatgtataaaaataactctagcgaatttcttgaa
agaagagtttataatggacaattaggattgattattaagcttgattttgatgatgaaaaa
tgcattgttttatatccaaatgatgatatggttgttttctatgattttgataatataaat
aatcttttaaatctagcatattgtttaacaatccataaaactcagggtatggagtatgaa
aatgcacttatacctatgagtttttcacactatataatgcacaatacaaaactactttat
acagcaattacaagagcaaaaaagatgtgctttgttgtaggagaagaagaggcttttaaa
agtgcttgtaaaaaaatagaggtaacaattagagagagtgttgttaatgatattttaagt
aaaaacatagtattagaagagaaaagtttagaaacaaatagtatatctattcctatttaa
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