Actinotignum timonense: CYJ17_0000345
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Entry
CYJ17_0000345 CDS
T09485
Name
(GenBank) DNA polymerase III subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
atim
Actinotignum timonense
Pathway
atim03030
DNA replication
atim03430
Mismatch repair
atim03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
atim00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CYJ17_0000345
03430 Mismatch repair
CYJ17_0000345
03440 Homologous recombination
CYJ17_0000345
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
atim03032
]
CYJ17_0000345
03400 DNA repair and recombination proteins [BR:
atim03400
]
CYJ17_0000345
Enzymes [BR:
atim01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CYJ17_0000345
DNA replication proteins [BR:
atim03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CYJ17_0000345
DNA repair and recombination proteins [BR:
atim03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CYJ17_0000345
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNA_pol3_gamma3
RuvB_N
AAA_22
AAA_30
Mg_chelatase
AAA_14
AAA_19
Rad17
AAA_5
AAA_16
DEAD
AAA_28
Pentapeptide_2
AAA_2
AAA_18
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
WOT01009
LinkDB
All DBs
Position
complement(92545..95325)
Genome browser
AA seq
926 aa
AA seq
DB search
MALYRRYRPERFQDVIGQEQVTRPLMAALRGERTVHAYLFSGPRGCGKTTSARILARCLN
CAQAPTDTPCGECASCRELAGDGPGSLDVVEMDAASHGGVDDARDLVERAAFAPSRDRYK
IFIIDEAHMVTTQGFNALLKLVEEPPAHIKFIFATTEPEKVIGTIRSRTHHYPFRLVSPA
RMEEYLSQICAEEGITPEPGVLGLVVRAGGGSVRDSLSVLDQLMGGSETSTLSYSQAVAL
LGYTDSGLLDRAVTAIAESSGSQLFGVVEELIGAGHEPRRFVEDLLQRLRDLIVIDLAGD
AAADALGELPQDQLAAMRTQAQALGVARATESAERANEALSAMVGATSPRLQLELLCARL
LLPGSGAAPSGSGSGGAARESGAARPVTGPAASGGNARKSPQDIAREKARAAAAAAAAQR
GAPVVPGSASVPAASAPQPVTSVPVQNDDAATPTQPAPQQAKESSAAPAAAQPLEQPAQP
VEQPAQQRAPQAEEHPAQQAVQPAGEPAVQQPREGSVERVAAPEESGPDHAAELTARWAE
VASSGRFAQAIFSGPTRVLGSRGNQVALEFSSEKVLGALQDPRNVERLSAHLSHFTSVPV
TVRVISAAPQQADAPGQPGSAGQPANATVAENPQSPATAQPRPSGPDGGGAHPKANAATA
AAAPAPAPASAAGAPARQEAVRGAGSAAADDEWPEPEELSDPDDAEDYPPSRQQAAPGNA
SSGAASPGPANSGSASPGSANPGGEIPFYLQNMPMPQPFAGPNDMPASPGSPALGGSQLA
AAQPAAGQVAAGQPAAPEPTQDFHIPRPPQRTQEVPTYDAREHLRQLRHGAAGGNAPAGS
APGGRGATGPGPSVNAPAAPASSAPAGPNSPHNSAPQAGVGYSTEEDDVSLDDPTIEQSN
VVGLQVVVEMLSGTIVEEIDTAQGGM
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcattgtatcggcggtatcgcccggagcgttttcaagatgttatcggccaggagcag
gtaactcgtcccctcatggctgcgttgcgcggggagcgcacggtgcacgcctatctcttc
tccggcccgcgcgggtgcgggaaaactacctcggcgcgcatccttgcccgctgcctgaat
tgtgcgcaggcgcccacggatacgccgtgcggggaatgtgcctcgtgccgggaactggcg
ggggatggccccggttcgctggacgtggtagaaatggacgcggccagccacggcggggtg
gatgatgcccgtgacctggtcgaacgcgcggcttttgcccctagccgggatcgctacaag
attttcattattgacgaagcccatatggtcaccactcagggtttcaacgctctgctcaaa
ctcgtggaagaacctccggctcatatcaagttcatttttgccactacggagccggaaaaa
gttatcggcactatccgctcgcgtactcatcactatccgttccgcctggtctccccggcg
cgcatggaggaatacctctcgcaaatctgcgcggaggaaggcatcactccggaaccgggg
gtgctcggtttggtggtgcgcgcgggcgggggatcggtgcgtgattccctctcggttttg
gaccagctcatgggcggttcggaaacctccacgctgtcgtattctcaggcggttgcgctg
ctgggttatacggatagcggcttgctggatcgcgcggtcaccgccattgccgaaagttcg
ggcagccagcttttcggcgtcgtcgaagaacttatcggtgccgggcacgaaccgcgccgt
ttcgtggaagatctgctccagcgcctgcgcgatctgatcgtcatcgatttggcgggggat
gccgcggcggacgctttgggtgaattaccgcaggatcagctggccgctatgcgcacccag
gcgcaggctttgggggtggcgcgcgccaccgaaagtgccgagcgtgcgaacgaggcgctt
tccgcgatggtgggcgctacctcgccgcgcttacaactggaattgctctgtgctcggctt
ttgcttcccggcagcggggcggcgccttcggggagcggttccggtggcgcggcgcgggaa
agcggcgcggcgcgccccgttactggacccgcggcaagtggtggaaacgcgcggaaatcg
ccgcaggatattgcgcgggaaaaggcccgggcagccgccgctgcggccgcagcgcagcgc
ggggccccggtagttccgggttctgctagcgttccggctgcgtctgcgccgcagcctgtt
acttccgttccggtacagaacgacgacgccgcaactcccacccagcccgctcctcaacag
gctaaggaatcgtccgcggcgccagctgcagctcagccgctggagcaacccgcgcagccg
gtggagcaacccgcgcagcagcgtgctccgcaagcggaagaacacccggctcagcaggcg
gttcagccagccggtgaaccagcagtgcagcaaccgcgcgaaggtagtgtggagcgggtg
gccgctccggaggaatcggggccggatcacgctgccgagctcacggcccggtgggcggag
gtagcctcatccgggcgtttcgcccaagcgattttctccgggcctaccagggtgctcggc
tcgcggggaaaccaggttgccctggagttttcttcggagaaggtgctcggcgccctccaa
gatccgcggaatgtggagcgtttgagtgcccacctttcgcatttcacctcggttccggtc
accgtgcgggttatttccgcggcccctcagcaggccgatgccccggggcaaccgggtagc
gcgggtcagccggctaacgcaacggttgcggagaatccccaatcgccagctacagctcag
ccgcgcccgagcggtcccgatggcggtggtgcccacccaaaagctaatgccgccaccgcg
gcggccgctcctgctcctgctcccgccagcgctgccggtgcacccgcacggcaggaagca
gtccgcggtgcaggtagcgcggccgcggatgatgagtggcctgaacctgaagaactctcc
gatccggatgacgcggaagactacccgcccagccggcaacaagccgcgcccggaaatgcg
agctctggcgcggccagccctggcccggctaattccggatcagctagccccggatcagct
aaccctggcggggagattcccttctatcttcaaaacatgcccatgccgcagcctttcgcc
ggcccgaacgatatgccggcatccccgggaagtccggcactaggtggcagccaactcgcc
gcggcgcagcccgcagcagggcaggtagctgcggggcagccagccgcacctgagcccacg
caggatttccatatcccgcgcccgccgcagcgcacccaggaagtccccacctatgacgcc
cgggaacacctacgccagcttcgccacggagcagcggggggcaacgcgcctgcggggagc
gcgcccggcggtaggggagccacgggccctgggcccagtgtcaatgcacccgctgcgccg
gccagctccgcgccagccggtccgaacagcccgcataattccgcgccgcaggcgggggtg
gggtattctactgaggaggatgatgtctccttggatgatcccacaatcgagcagagcaat
gttgtcggtctgcaagttgtggtggaaatgctctcgggaaccatcgttgaagaaattgat
accgcacaaggaggaatgtag
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